Document:

Fifth Supplemental Indenture

 Exhibit 10.1 
 FIFTH SUPPLEMENTAL INDENTURE (this “Fifth Supplemental Indenture”), dated as of December 15, 2011, among Navios Maritime Acquisition Corporation, a Marshall Islands corporation, (the
“Company”), Navios Acquisition Finance (US) Inc., a Delaware corporation (together with the Company, the “Co-Issuers”), and Oinousses Shipping Corporation, Psara Shipping Corporation and Antipsara Shipping
Corporation, (each a “Guaranteeing Subsidiary”), each a Marshall Islands corporation and an indirect subsidiary of the Company, the other Guarantors (as defined in the Indenture referred to herein) and Wells Fargo Bank, National
Association, as trustee (or its permitted successor) under the Indenture referred to below (the “Trustee”) and as collateral trustee (or its permitted successor) under the Indenture referred to below (the “Collateral
Trustee”). 
 WITNESSETH 
 WHEREAS, the Co-Issuers and the Guarantors have heretofore executed and delivered to the Trustee an indenture (the “Indenture”), dated as of October 21, 2010 providing for the
issuance of 8 5/8% First Priority Ship Mortgage Notes due 2017 (the “Notes”); 
 WHEREAS, the Indenture
provides that under certain circumstances each Guaranteeing Subsidiary shall execute and deliver to the Trustee a supplemental indenture pursuant to which each Guaranteeing Subsidiary shall unconditionally guarantee all of the Co-Issuers’
obligations under the Notes and the Indenture on the terms and conditions set forth herein (the “Note Guarantee”); and 
 WHEREAS, pursuant to Section 9.01 of the Indenture, the Trustee is authorized to execute and deliver this Fifth Supplemental Indenture. 

NOW, THEREFORE, in consideration of the foregoing and for other good and valuable consideration, the receipt of which is hereby
acknowledged, each Guaranteeing Subsidiary and the Trustee mutually covenant and agree for the equal and ratable benefit of the Holders of the Notes as follows: 
 1. CAPITALIZED TERMS. Capitalized terms used herein without definition shall have the meanings assigned to them in the Indenture. 
 2. AGREEMENT TO GUARANTEE. Each Guaranteeing Subsidiary hereby agrees to provide an unconditional Guarantee, on and subject to the terms, conditions and limitations set forth in the Notation of Guarantee
and in the Indenture, including, but not limited, to Article Ten thereof. 
 4. NEW YORK LAW TO GOVERN. THIS FIFTH SUPPLEMENTAL
INDENTURE SHALL BE GOVERNED BY AND CONSTRUED IN ACCORDANCE WITH THE LAWS OF THE STATE OF NEW YORK, WITHOUT GIVING EFFECT TO CONFLICTS OF LAW PRINCIPLES TO THE EXTENT THAT THE APPLICATION OF THE LAWS OF ANOTHER JURISDICTION WOULD BE REQUIRED THEREBY.

 5. COUNTERPARTS. The parties may sign any number of copies of this Fifth Supplemental Indenture. Each signed copy shall be an
original, but all of them together represent the same agreement. 

 6. EFFECT OF HEADINGS. The Section headings herein are for convenience only and shall not
affect the construction hereof. 
 7. THE TRUSTEE. The Trustee shall not be responsible in any manner whatsoever for or in
respect of the validity or sufficiency of this Fifth Supplemental Indenture or for or in respect of the recitals contained herein, all of which recitals are made solely by each Guaranteeing Subsidiary and the Co-Issuers. 

 IN WITNESS WHEREOF, the parties hereto have caused this Fifth Supplemental Indenture to be
duly executed and attested, all as of the date first above written. 
  

			
	 OINOUSSES SHIPPING CORPORATION
 ANTIPSARA SHIPPING CORPORATION
 PSARA SHIPPING CORPORATION

		
	By:	 	/s/ Alexandros Laios
		 	Name: Alexandros Laios
		 	Title: Secretary/Director

  

			
	 NAVIOS MARITIME ACQUISITION CORPORATION

		
	By:	 	/s/ Leonidas Korres
		 	Name: Leonidas Korres
		 	Title: Chief Financial Officer

  

			
	 NAVIOS ACQUISITION FINANCE (US) INC.

		
	By:	 	/s/ Vasiliki Papaefthymiou
		 	Name: Vasiliki Papaefthymiou
		 	Title: President/Secretary

  

			
	 SHINYO DREAM LIMITED

SHINYO KANNIKA LIMITED
 SHINYO LOYALTY
LIMITED
 SHINYO NAVIGATOR LIMITED

SHINYO OCEAN LIMITED
 SHINYO SAOWALAK
LIMITED
 SHINYO KIERAN LIMITED

		
	By:	 	/s/ Alexandros Laios
		 	Name: Alexandros Laios
		 	Title: Director

 
			
	 AEGEAN SEA MARITIME HOLDINGS INC.
 THERA SHIPPING CORPORATION
 TINOS SHIPPING CORPORATION

AMORGOS SHIPPING CORPORATION
 ANDROS SHIPPING
CORPORATION
 ANTIPAROS SHIPPING CORPORATION
 CRETE SHIPPING CORPORATION
 IKARIA SHIPPING CORPORATION

IOS SHIPPING CORPORATION
 KOS SHIPPING
CORPORATION
 MYTILENE SHIPPING CORPORATION
 RHODES SHIPPING CORPORATION
 SIFNOS SHIPPING CORPORATION

SKIATHOS SHIPPING CORPORATION
 SKOPELOS SHIPPING
CORPORATION
 SYROS SHIPPING CORPORATION

		
	By:	 	/s/ George Achniotis
		 	Name: George Achniotis
		 	Title: President/Director

  

			
	 KITHIRA SHIPPING CORPORATION
 ANTIKITHIRA SHIPPING CORPORATION
 AMINDRA NAVIGATION CO.

SERIFOS SHIPPING CORPORATION
 FOLEGANDROS
SHIPPING CORPORATION

		
	By:	 	/s/ Alexandros Laios
		 	Name: Alexandros Laios
		 	Title: Secretary/Director

  

			
	 WELLS FARGO BANK, NATIONAL ASSOCIATION,
 as Trustee

		
	By:	 	/s/ Martin Reed
		 	Name: Martin Reed
		 	Title: Vice President

 
			
	 WELLS FARGO BANK, NATIONAL ASSOCIATION,
 as Collateral Trustee

		
	By:	 	/s/ Martin Reed
		 	Name: Martin Reed
		 	Title: Vice PresidentFirst Supplemental Agreement

 Exhibit 10.2 
 Date 20 December 2011 
 IOS SHIPPING CORPORATION 

and 

SKOPELOS SHIPPING CORPORATION 
 as Borrowers 
 DVB BANK SE 

and 
 ABN
AMRO BANK N.V. 
 as Lenders 
 and 
 DVB BANK SE 

as Joint-Arranger, Agent and Security Trustee 
 and 
 ABN AMRO BANK N.V. 

as Joint-Arranger 
  

 
 FIRST
SUPPLEMENTAL AGREEMENT 
  
  

in relation to a Loan Agreement dated 28 May 2010 
 for a loan facility of up to USD52,000,000 
 INCE & CO

 PIRAEUS 

 Index 
  

							
	Clause	  	Page No	 
			
	1	 	INTERPRETATION	  	 	1	  
			
	2	 	AGREEMENT OF THE LENDER	  	 	2	  
			
	3	 	CONDITIONS PRECEDENT	  	 	2	  
			
	4	 	REPRESENTATIONS AND WARRANTIES	  	 	3	  
			
	5	 	AMENDMENTS TO LOAN AGREEMENT AND OTHER SECURITY DOCUMENTS	  	 	3	  
			
	6	 	FURTHER ASSURANCES	  	 	4	  
			
	7	 	FEES AND EXPENSES	  	 	5	  
			
	8	 	NOTICES	  	 	5	  
			
	9	 	COUNTERPARTS	  	 	5	  
			
	10	 	LAW AND JURISDICTION	  	 	5	  
		
	Schedule	  	 	7	  

 THIS AGREEMENT is made on 20 December 2011 

BETWEEN 
  

	(1)	IOS SHIPPING CORPORATION and SKOPELOS SHIPPING CORPORATION as Borrowers; 

 

	(2)	DVB BANK SE and ABN AMRO BANK N.V. (formerly known as FORTIS BANK (NEDERLAND) N.V.) as Lenders; 

 

	(3)	DVB BANK SE as Joint-Arranger, Agent and Security Trustee; and 

  

	(4)	ABN AMRO BANK N.V. (formerly known as FORTIS BANK (NEDERLAND) N.V.) as Joint-Arranger. 

 BACKGROUND 
  

	(A)	By a Loan Agreement dated 28 May 2010 and made between the parties hereto the Lenders have made available to the Borrower a loan of up to USD52,000,000.

  

	(B)	The Borrowers have made a request to the Lenders to agree to amend certain terms of the Loan Agreement, and this Agreement sets out the terms and conditions on which
the Lenders agree thereto. 

 IT IS AGREED as follows: 

 

	1	INTERPRETATION 

  

	1.1	Defined expressions. Words and expressions defined in the Loan Agreement and the other Security Documents shall have the same meanings when used in this
Agreement unless the context otherwise requires. 

  

	1.2	Definitions. In this Agreement, unless the contrary intention appears: 

“Loan Agreement” means the Loan Agreement dated 28 May 2010 referred to in Recital (A); and 

“New Charter Assignment” means a specific assignment of each New Charter required to be executed hereunder by the
relevant Borrower in favour of the Security Trustee (including any notices and/or acknowledgements and/or undertakings associated therewith) in such form as the Agent and the Majority Lenders may require in their sole discretion. 

Words and expressions advised in the Schedule to this Agreement shall have the meanings given to them therein as if set out in full in
this Clause 1.2. 
  

	1.3	Application of construction and Interpretation provisions of Loan Agreement. Clauses 1.3 to 1.6 (inclusive) of the Loan Agreement apply, with any necessary
modifications, to this Agreement. 

  
 1 

	2	AGREEMENT OF THE LENDER 

  

	2.1	Agreement of the Lenders. The Lenders, relying upon each of the representations and warranties in Clause 4 and subject to Clause 3, agree to amend the Loan
Agreement as set out in Clause 5.1 below. 

  

	2.2	Effective Date. The agreement of the Lenders contained in Clause 2.1 shall have effect on and from the date of termination of the Charters.

  

	3	CONDITIONS PRECEDENT 

  

	3.1	Conditions precedent. The conditions referred to in Clause 2.1 are that the Agent shall have received the following documents: 

 

	(a)	Corporate documents 

 Certified
Copies of all documents which evidence or relate to the constitution of each Borrower and its current corporate existence; 
  

	(b)	Corporate authorities 

  

	 	(i)	Certified Copies of resolutions of the directors of each Borrower approving this Agreement and authorising the execution and delivery thereof and performance of its
obligations hereunder, additionally certified by an officer of each Borrower as having been duly passed at a duly convened meeting of the directors of the Borrower and not having been amended, modified or revoked and being in full force and effect;
and 

  

	 	(ii)	Originals of any powers of attorney issued by each Borrower pursuant to such resolutions; and 

 

	(c)	Required Authorisations 

 a
certificate that there are no Required Authorisations or that there are no Required Authorisations except those described in such certificate and Certified Copies of which as duly executed (including any conditions and/or documents ancillary
thereto) are appended thereto. 
  

	(d)	Certificate of incumbency 

 a
list of directors and officers of each Borrower specifying the names and positions of such persons, certified by an officer of each Borrower to be true, complete and up to date; 

 

	(e)	New Charter Assignments 

 the New
Charter Assignments duly executed and delivered; 
  

	(f)	Underlying Documents 

 Certified
Copies of the New Charters; 

  
 2 

	(g)	Endorsement 

 the endorsement at
the end of this Agreement signed by each Security Party (other than the Borrower); 
  

	(h)	London agent 

 documentary
evidence that the agent for service of process named in Clause 19 of the Loan Agreement has accepted its appointment; and 
  

	(i)	Further opinions 

 any such
further opinions as may be required by the Agent. 
  

	4	REPRESENTATIONS AND WARRANTIES 

  

	4.1	Repetition of Loan Agreement representations and warranties. The Borrower represents and warrants to each Bank that the representations and warranties in
Clause 7 of the Loan Agreement, as amended and supplemented by this Agreement and updated with appropriate modifications to refer to this Agreement, remain true and not misleading if repeated on the date of this Agreement with reference to the
circumstances now existing. 

  

	5	AMENDMENTS TO LOAN AGREEMENT AND OTHER SECURITY DOCUMENTS 

  

	5.1	Specific amendments to Loan Agreement. With effect on and from the date of this Agreement, the Loan Agreement shall be, and shall be deemed by this
Agreement to be, amended as follows: 

  

	(a)	by adding in Clause 1.2 thereof each of the definitions in Clause 1.2 (other than the definition of “Loan Agreement”) 

 

	(b)	by adding in the definition of “Security Documents” in Clause 1.2 after the words “the Shares Pledges” the words “, the New Charter
Assignments”; 

  

	(c)	by adding in the definition of “Underlying Documents” in Clause 1.2 thereof after the words “the Management Agreement” the words “and
the New Charters”; 

  

	(d)	by adding at the end of Clause 4.1.1 the following: 

 “Provided that if the Charters terminate before three years then the Borrowers shall, on the demand of the Agent, prepay the Loan by USD2,500,000, whereupon the five successive repayment instalments
in respect of each Advance commencing with the repayment instalment due in March 2012 shall be reduced by USD250,000 each.”; 
  

	(e)	by adding a new clause 4.7 to read: 

 “4.7 Mandatory prepayment on non-extension of a New Charter 
 In the
event that the New Charterer does not exercise its option to extend the initial period of a New Charter by 31 July 2012, the Borrowers shall make a prepayment of the Advance relating to that the Vessel subject to that New Charter in the amount
of USD250,000 on or before 31 December 2012 and the amount so prepaid shall be applied against the repayment instalment in respect of the relevant Advance falling due in June 2013.”; 

  
 3 

	(f)	by adding in Schedule 7 thereof each of the definitions in the Schedule to this Agreement; 

 

	(g)	by construing references throughout to “this Agreement”, “hereunder” and other like expressions as if the same referred to the Loan Agreement as
amended and supplemented by this Agreement. 

  

	5.2	Amendments to Security Documents. With effect on and from the date of this Agreement, each of the Security Documents other than the Loan Agreement, shall be, and
shall be deemed by this Agreement to be, amended as follows: 

  

	 	(a)	the definition of, and references throughout each of the Security Documents to, the Loan Agreement and any of the other Security Documents shall be construed as if the
same referred to the Loan Agreement and those Security Documents as amended and supplemented by this Agreement; and 

  

	 	(b)	by construing references throughout each of the Security Documents to “this Agreement”, “this Deed”, “hereunder” and other like
expressions as if the same referred to such Security Documents as amended and supplemented by this Agreement. 

  

	5.3	Security Documents to remain in full force and effect. The Security Documents shall remain in full force and effect as amended and supplemented by:

  

	 	(a)	the amendments to the Security Documents contained or referred to in Clauses 5.1 and 5.2; and 

 

	 	(b)	such further or consequential modifications as may be necessary to give full effect to the terms of this Agreement. 

 

	6	FURTHER ASSURANCES 

  

	6.1	Borrower’s obligation to execute further documents etc. The Borrower shall, and shall procure that any other party to any Security Document shall,

  

	 	(a)	execute and deliver to the Agent (or as it may direct) any assignment, mortgage, power of attorney, proxy or other document, governed by the law of England or such
other country as the Agent may, in any particular case, reasonably specify, 

  

	 	(b)	effect any registration or notarisation, give any notice or take any other step, which the Agent may, by notice to the Borrower or other party, reasonably specify for
any of the purposes described in Clause 6.2 or for any similar or related purpose. 

  

	6.2	Purposes of further assurances. Those purposes are: 

  

	 	(a)	perfecting the security contemplated or constituted by the Security Documents, each as amended and supplemented by this Agreement; and 

 

	 	(b)	implementing the terms and provisions of this Agreement. 

  

	6.3	Terms of further assurances. The Agent may specify the terms of any document to be executed by the Borrower or any other party under Clause 6.1, and those terms
may include any covenants, powers and provisions which the Agent reasonably considers appropriate to protect its interests. 

  
 4 

	6.4	Obligation to comply with notice. The Borrower shall comply with a notice under Clause 6.1 within 3 Banking days of the date of such notice.

  

	6.5	Additional corporate action. At the same time as the Borrower or any other party delivers to the Agent any document executed under Clause 6.1(a), the Borrower or
such other party shall also deliver to the Agent a certificate signed by 2 of the Borrower’s or that other party’s directors which shall: 

  

	 	(a)	set out the text of a resolution of the Borrower’s or that other party’s directors specifically authorising the execution of the document specified by the
Agent, and 

  

	 	(b)	state that either the resolution was duly passed at a meeting of the directors validly convened and held throughout which a quorum of directors entitled to vote on the
resolution was present or that the resolution has been signed by all the directors and is valid under the Borrower’s or that other party’s articles of association or other constitutional documents. 

 

	7	FEES AND EXPENSES 

  

	7.1	Expenses. The provisions of Clauses 5.3 (Expenses), 5.4 (Value added tax) and 5.5 (Stamp and other duties) of the Loan Agreement, as amended and supplemented by
this Agreement, shall apply to this Agreement as if they were expressly incorporated in this Agreement with any necessary modifications. 

  

	8	NOTICES 

  

	8.1	The provisions of clause 17 (Notices) of the Loan Agreement, as amended and supplemented by this Agreement, shall apply to this Agreement as if they were expressly
incorporated in this Agreement with any necessary modifications. 

  

	9	COUNTERPARTS 

  

	9.1	This Agreement may be executed in any number of counterparts. 

  

	10	LAW AND JURISDICTION 

  

	10.1	Incorporation of the Loan Agreement provisions. The provisions of Clauses 18 and 19 (Governing Law and Jurisdiction) of the Loan Agreement, as amended and
supplemented by this Agreement, shall apply to this Agreement as if they were expressly incorporated in this Agreement with any necessary modifications. 

 IN WITNESS whereof the parties to this Agreement have caused this Agreement to be duly executed on the date first above written. 

  
 5 

			
	 SIGNED by ALEXANDROS LAIOS
	  	)
	 as a deed for and on behalf of
	  	)
	 IOS SHIPPING CORPORATION
	  	) /s/ Alexandros Laios
	 (as Borrower under and pursuant to
	  	)
	 a power of attorney dated
	  	)
	 8 December 2011)
	  	)
		
	 SIGNED by ALEXANDROS LAIOS
	  	)
	 as a deed for and on behalf of
	  	)
	 SKOPELOS SHIPPING CORPORATION
	  	) /s/ Alexandros Laios
	 (as Borrower under and pursuant to
	  	)
	 a power of attorney dated
	  	)
	 8 December 2011)
	  	)
		
	 SIGNED by ROBIN PARRY
	  	)
	 for and on behalf of
	  	)
	 DVB BANK SE
	  	) /s/ Robin Parry
	 (as a Lender)
	  	)
		
	 SIGNED by ROBIN PARRY
	  	)
	 for and on behalf of
	  	)
	 ABN AMRO BANK N.V. (formerly known
	  	) /s/ Robin Parry
	 as FORTIS BANK (NEDERLAND) N.V.)
	  	)
	 (as a Lender)
	  	)
		
	 SIGNED by ROBIN PARRY
	  	)
	 for and on behalf of
	  	) /s/ Robin Parry
	 DVB BANK SE
	  	)
	 (as Joint-Arranger, Agent and Security Trustee)
	  	)
		
	 SIGNED by ROBIN PARRY
	  	)
	 for and on behalf of
	  	)
	 ABN AMRO BANK N.V. (formerly known
	  	) /s/ Robin Parry
	 as FORTIS BANK (NEDERLAND) N.V.)
	  	)
	 (as Joint-Arranger)
	  	)
		
	 Witness to all the above
	  	) /s/ Ronan Le Du
	 Signatures:
	  	)
	 Name: RONAN LE DU
	  	
	 Address:
	  	
	 47-49 Akti Miaouli
	  	
	 Piraeus, Greece
	  	

  
 6 

 We on this 20th day of December 2011 hereby confirm and acknowledge that we have read and understood the
terms and conditions of the above First Supplemental Agreement and agree in all respects to the same and confirm that the Security Documents to which we are respectively a party shall remain in full force and effect and shall continue to stand as
security for the obligations of the Borrower under the Facility Agreement (as amended by the First Supplemental Agreement) and shall, without limitation, secure the Loan. 

 

									
					
		 	/s/ Vasiliki Papaefthymiou	 		 		 	/s/ Vasiliki Papaefthymiou
		 	VASILIKI PAPAEFTHYMIOU	 		 		 	VASILIKI PAPAEFTHYMIOU
		 	For and on behalf of	 		 		 	For and on behalf of
		 	NAVIOS MARITIME ACQUISITION	 		 		 	NAVIOS SHIPMANAGEMENT INC.
		 	CORPORATION	 		 		 	
					
		 	/s/ Vasiliki Papaefthymiou	 		 		 	
		 	VASILIKI PAPAEFTHYMIOU	 		 		 	
		 	For and on behalf of	 		 		 	
		 	AEGEAN SEA MARITIME HOLDINGS INC.	 		 		 	

  
 7

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