Document:

Preferred Stock Purchase Warrant

 Exhibit 4.6D 
 NEITHER THIS WARRANT NOR THE SHARES OF CAPITAL STOCK ISSUABLE UPON EXERCISE HEREOF HAVE BEEN REGISTERED UNDER THE SECURITIES ACT OF 1933, AS AMENDED (THE “1933 ACT”), OR ANY APPLICABLE
STATE SECURITIES LAWS. SUCH SECURITIES MAY NOT BE SOLD OR TRANSFERRED UNLESS SUCH SALE OR TRANSFER IS IN ACCORDANCE WITH THE REGISTRATION REQUIREMENTS OF SUCH ACT AND APPLICABLE LAWS OR THE COMPANY HAS RECEIVED AN OPINION OF COUNSEL, REASONABLY
ACCEPTABLE TO THE COMPANY, TO THE EFFECT THAT SUCH SALE OR TRANSFER IS EXEMPT FROM THE REGISTRATION REQUIREMENTS OF SUCH ACT AND APPLICABLE LAWS. 
 PREFERRED STOCK PURCHASE WARRANT 
  

			
	 Warrant No.            
	 	Number of Shares: $699,760/Purchase Price
		 	 Preferred Stock
 subject to change as set forth below

 FLUIDIGM
CORPORATION 
 Effective as of June 14, 2010 

Void after June 14, 2017 
 1.        Issuance.  This Preferred Stock Purchase Warrant (the “Warrant”) is issued to LIGHTHOUSE
CAPITAL PARTNERS V, L.P. by FLUIDIGM CORPORATION, a Delaware corporation (hereinafter with its successors called the “Company”). 

2.        Purchase Price; Number of Shares.  The registered
holder of this Warrant (the “Holder”), commencing on the date hereof, is entitled upon surrender of this Warrant with the subscription form annexed hereto duly executed, at the principal office of the Company, to purchase from the
Company, at a price per share equal to the Purchase Price, that number of fully paid and nonassessable shares of the Company’s Preferred Stock equal to $699,760, divided by the Purchase Price. 

Until such time as the Next Round Financing (as defined below) closes, the Holder shall have the right, in substitution of the rights
granted to Holder above, upon surrender of this Warrant with the subscription form annexed hereto duly executed, at the principal office of the Company, to purchase from the Company, at a price per share equal to the Purchase Price, that number of
shares the Prior Preferred Stock equal to $699,760, divided by the Purchase Price. 
 In addition to other terms which
may be defined herein, the following terms, as used in this Warrant, shall have the following meanings: 

        (i)        “Next
Round Financing” means a sale of shares of Next Round Stock for cash, but does not include the issuance of any other instrument or other security convertible into or exchangeable for preferred stock, or the issuance of any option, warrant
or right to acquire any preferred stock or any security convertible or exchangeable for preferred stock. 

        (ii)        “Next
Round Stock” means the class or series of the Company’s preferred equity securities issued in connection with the Next Round Financing. 
         (iii)        “Preferred Stock” means (a) prior to the Next Round Financing, the Prior
Preferred Stock, otherwise (b) if the lowest price per share paid by an investor for a share of Next Round Stock in connection with the Next Round Financing is less than or equal to $7.00, the Next Round Stock, or (c) if the lowest price
per share paid by an investor for a share of Next Round Stock in connection with the Next Round Financing is 

  
 1. 

 
greater than $7.00, a new series of the preferred equity securities to be created by the Company, the rights, privileges and preferences of which will replicate those of the Next Round Stock,
except that the liquidation preference for such shares will be $7.00 per share, subject to adjustment from time to time in accordance with the Company’s certificate of incorporation then in effect. 

        (iv)        
“Prior Preferred Stock” means the Company’s Series E-1 Preferred Stock. 

        (v)        
“Purchase Price” means the lesser of (i) the lowest price per share paid by an investor for a share of Next Round Stock in connection with the Next Round Financing or (ii) $7.00. 

Any capitalized term not defined herein shall have the meaning as set forth in the Loan Agreement. 

Until such time as this Warrant is exercised in full or expires, the Purchase Price and the securities issuable upon exercise of this
Warrant are subject to adjustment as hereinafter provided. The person or persons in whose name or names any certificate representing shares of Preferred Stock is issued hereunder shall be deemed to have become the holder of record of the shares
represented thereby as at the close of business on the date this Warrant is exercised with respect to such shares, whether or not the transfer books of the Company shall be closed. 

3.        Payment of Purchase Price.  The Purchase Price may be
paid (i) in cash or by check, (ii) by the surrender by the Holder to the Company of any promissory notes or other obligations issued by the Company, with all such notes and obligations so surrendered being credited against the Purchase
Price in an amount equal to the principal amount thereof plus accrued interest to the date of surrender, or (iii) by any combination of the foregoing. 
 4.        Net Issue Election.  The Holder may elect to receive, without the payment by the Holder of any additional consideration, shares of
Preferred Stock equal to the value of this Warrant or any portion hereof by the surrender of this Warrant or such portion to the Company, with the net issue election notice annexed hereto duly executed, at the principal office of the Company.
Thereupon, the Company shall issue to the Holder such number of fully paid and nonassessable shares of Preferred Stock as is computed using the following formula: 
  

					
		 	 X= Y(A-B)
	  	
		 	    A	  	

  

							
		 	 where:
	 	 X =
	 	 the number of shares of Preferred Stock to be issued to the Holder pursuant to this Section 4.

				
		 		 	 Y =
	 	 the number of shares of Preferred Stock covered by this Warrant in respect of which the net issue election is made pursuant to this
Section 4.

				
		 		 	 A =
	 	 the Fair Market Value (defined below) of one share of Preferred Stock, as determined at the time the net issue election is made pursuant to this
Section 4.

				
		 		 	 B =
	 	 the Purchase Price in effect under this Warrant at the time the net issue election is made pursuant to this
Section 4.

     “Fair Market Value” of a
share of Preferred Stock (or fully paid and nonassessable shares of the Company’s common stock, $0.0035 par value (the “Common Stock”) if the Preferred Stock has been automatically converted into Common Stock) as of the date
that the net issue election is made (the “Determination Date”) shall mean: 

    (i)        If the net issue election is made in
connection with and contingent upon the closing of the sale of the Company’s Common Stock to the public in a public offering pursuant to a Registration Statement under the 1933 Act (a “Public Offering”), and if the
Company’s Registration Statement relating to such Public Offering (“Registration Statement”) has been declared effective by the Securities and Exchange Commission, then the initial

  
 2. 

 
“Price to Public” specified in the final prospectus with respect to such offering multiplied by the number of shares of Common Stock into which each share of Preferred Stock is then
convertible. 

    (ii)          If the net issue election
is not made in connection with and contingent upon a Public Offering, then as follows: 

        (a)        If traded on a
securities exchange or the Nasdaq National Market, the fair market value of the Common Stock shall be deemed to be the average of the closing or last reported sale prices of the Common Stock on such exchange or market over the five day period ending
five trading days prior to the Determination Date, and the fair market value of the Preferred Stock shall be deemed to be such fair market value of the Common Stock multiplied by the number of shares of Common Stock into which each share of
Preferred Stock is then convertible; 

        (b)        If otherwise
traded in an over-the-counter market, the fair market value of the Common Stock shall be deemed to be the average of the closing ask prices of the Common Stock over the five day period ending five trading days prior to the Determination Date, and
the fair market value of the Preferred Stock shall be deemed to be such fair market value of the Common Stock multiplied by the number of shares of Common Stock into which each share of Preferred Stock is then convertible; and 

        (c)        If there is no
public market for the Common Stock, then fair market value shall be determined in good faith by the Company’s Board of Directors. 
 5.        Partial Exercise. This Warrant may be exercised in part, and the Holder shall be entitled to receive a new warrant, which shall be dated as of the
date of this Warrant, covering the number of shares in respect of which this Warrant shall not have been exercised. 
 6.        Fractional Shares. In no event shall any fractional share of Preferred Stock be issued upon any exercise of this Warrant. If, upon exercise of this
Warrant in its entirety, the Holder would, except as provided in this Section 6, be entitled to receive a fractional share of Preferred Stock, then the Company shall issue the next higher number of full shares of Preferred Stock, issuing
a full share with respect to such fractional share. 

7.        Expiration Date; Automatic
Exercise.      This Warrant shall expire at the close of business on March         , 2017, and shall be void thereafter (the “Expiration Date”).
Notwithstanding the term of this Warrant fixed pursuant to this Section 7, and provided Holder has received advance written notice of at least twenty (20) days and has not earlier exercised this Warrant, and provided this Warrant
has not been assumed by the successor entity (or parent thereof), upon the consummation of a Merger (as defined below), this Warrant shall automatically be exercised pursuant to Section 4 hereof, without any action by Holder.
“Merger” means: (i) a sale of all or substantially all of the Company’s assets to an Unaffiliated Entity (as defined below), or (ii) the merger, consolidation or acquisition of the Company with, into or by an
Unaffiliated Entity (other than a merger or consolidation for the principle purpose of changing the domicile of the Company or a bona fide round of preferred stock equity financing), that results in the Company’s shareholders immediately prior
to such merger, consolidation, or acquisition holding, immediately thereafter, less than a majority of the outstanding voting securities of the successor corporation or its parent. “Unaffiliated Entity” means any entity that is
owned or controlled by parties who own less than twenty percent (20%) of the combined voting power of the voting securities of the Company immediately prior to such merger or sale of assets, consolidation or acquisition. Notwithstanding the
foregoing, in the event that any outstanding warrants to purchase equity securities of the Company (it being acknowledged and agreed that options to acquire common stock issued to officers, directors, employees and consultants shall not be deemed
“warrants”) are assumed by the successor entity of a Merger (or parent thereof), this Warrant shall also be similarly assumed and the automatic exercise provision in this Section 7 shall have no effect. The Company agrees to
give the Holder written notice promptly after it has entered into a definitive agreement relating to any proposed Merger and written notice of termination of any definitive agreement relating to any proposed Merger. Notwithstanding anything to the
contrary in this Warrant, (i) the Holder may expressly make any voluntary exercise of this Warrant contingent on, and effective immediately prior to, the consummation of such Merger and (ii) any automatic exercise of this Warrant in
connection with a Merger shall be conditioned on consummation of such Merger and shall be effective immediately prior thereto. 

  
 3. 

 8.        Reserved Shares; Valid
Issuance.  The Company covenants that it will at all times from and after the date hereof reserve and keep available such number of its authorized shares of Preferred Stock and Common Stock free from all preemptive or similar rights
therein, as will be sufficient to permit, respectively, the exercise of this Warrant in full and the conversion into shares of Common Stock of all shares of Preferred Stock receivable upon such exercise. The Company further covenants that such
shares as may be issued pursuant to such exercise and/or conversion will, upon issuance, be duly and validly issued, fully paid and nonassessable and free from all taxes, liens and charges with respect to the issuance thereof. 

9.        Stock Splits and Dividends.  If after the date hereof
the Company shall subdivide the Preferred Stock, by split-up or otherwise, or combine the Preferred Stock, or issue additional shares of Preferred Stock in payment of a stock dividend on the Preferred Stock, the number of shares of Preferred Stock
issuable on the exercise of this Warrant shall forthwith be proportionately increased in the case of a subdivision or stock dividend, or proportionately decreased in the case of a combination, and the Purchase Price shall forthwith be
proportionately decreased in the case of a subdivision or stock dividend, or proportionately increased in the case of a combination. 
 10.        Adjustments for Diluting Issuances.  The antidilution rights applicable to the Series E-1 Preferred Stock of the Company are set
forth in the Third Amended and Restated Certificate of Incorporation, as amended from time to time (the “Certificate”), a true and complete copy of which in its current form is attached hereto as Exhibit A. Such rights shall not be
restated, amended or modified in any manner which affects the Holder differently than the holders of outstanding Series E-1 Preferred Stock without such Holder’s prior written consent. The Company shall provide the Holder hereof with any
restatement, amendment or modification to the Certificate promptly after the same has been made. 

    11.        Mergers and
Reclassifications.  (a)  Except as set forth in Section 7, If after the date hereof the Company shall enter into any Reorganization (as hereinafter defined), then, as a condition of such Reorganization,
lawful provisions shall be made, and duly executed documents evidencing the same from the Company or its successor shall be delivered to the Holder, so that the Holder shall thereafter have the right to purchase, at a total price not to exceed that
payable upon the exercise of this Warrant in full, the kind and amount of shares of stock and other securities and property receivable upon such Reorganization by a holder of the number of shares of Preferred Stock which might have been purchased by
the Holder immediately prior to such Reorganization, and in any such case appropriate provisions shall be made with respect to the rights and interest of the Holder to the end that the provisions hereof (including without limitation, provisions for
the adjustment of the Purchase Price and the number of shares issuable hereunder and the provisions relating to the net issue election) shall thereafter be applicable in relation to any shares of stock or other securities and property thereafter
deliverable upon exercise hereof. For the purposes of this Section 11, the term “Reorganization” shall include without limitation any reclassification, capital reorganization or change of the Preferred Stock (other than
as a result of a subdivision, combination or stock dividend provided for in Section 9 hereof), or any consolidation of the Company with, or merger of the Company into, another corporation or other business organization (other than a
merger in which the Company is the surviving corporation and which does not result in any reclassification or change of the outstanding Preferred Stock), or any sale or conveyance to another corporation or other business organization of all or
substantially all of the assets of the Company. 

    (b)        Notwithstanding any other provision of
this Warrant, in the event of an automatic conversion of the Company’s outstanding Series E-1 Preferred Stock into Common Stock in accordance with the Company’s Certificate, as in effect from time to time, this Warrant shall
thereafter represent the right to acquire for the aggregate Purchase Price (as then in effect) the number of shares of Common Stock into which the number of shares of Preferred Stock issuable upon exercise of this Warrant would have then been
convertible. 
 12.        Certificate of
Adjustment.  Whenever the Purchase Price is adjusted, as herein provided, the Company shall promptly deliver to the Holder a certificate of the Company’s chief financial officer (or other appropriate officer) setting forth the
Purchase Price after such adjustment and setting forth a brief statement of the facts requiring such adjustment. 
 13.        Notices of Record Date, Etc.  In the event of: 

  
 4. 

     (a)        any taking by the Company of a
record of the holders of any class of securities for the purpose of determining the holders thereof who are entitled to receive any dividend or other distribution, or any right to subscribe for, purchase, sell or otherwise acquire or dispose of any
shares of stock of any class or any other securities or property, or to receive any other right; 

     (b)        any reclassification of the
capital stock of the Company, capital reorganization of the Company, consolidation or merger involving the Company, or sale or conveyance of all or substantially all of its assets; or 

     (c)        any voluntary or involuntary
dissolution, liquidation or winding-up of the Company; 
 then in each such event the Company will provide or cause to be
provided to the Holder a written notice thereof. Such notice shall be provided at least twenty (20) business days prior to the date specified in such notice on which any such action is to be taken. 

14.        Market Stand-off.  The Holder hereby agrees that such
Holder shall not sell or otherwise transfer, make any short sale of, grant any option for the purchase of, or enter into any hedging or similar transaction with the same economic effect as a sale, of any common stock (or other securities) of the
Company held by the Holder (other than those included in the registration) during the one hundred eighty (180) day period following the effective date of the registration statement for a Public Offering filed under the 1933 Act (or such other
period as may be requested by the Company or an underwriter to accommodate regulatory restrictions on (i) the publication or other distribution of research reports and (ii) analyst recommendations and opinions, including, but not limited
to, the restrictions contained in NASD Rule 2711(f)(4) or NYSE Rule 472(f)(4), or any successor provisions or amendments thereto). The obligations described in this section shall not apply to a registration relating solely to employee
benefit plans on Form S-l or Form S-8 or similar forms that may be promulgated in the future, or a registration relating solely to a transaction on Form S-4 or similar forms that may be promulgated in the future. The Company may impose stop-transfer
instructions and may stamp each certificate with a legend with respect to the shares of common stock (or other securities) subject to the foregoing restriction until the end of such one hundred eighty (180) day (or other) period. The Holder
agrees to execute a market stand-off agreement with the underwriters in the offering in customary form consistent with the provisions of this section. 
 15.        Representations, Warranties and Covenants.  This Warrant is issued and delivered by the Company and accepted by each Holder on the basis
of the following representations, warranties and covenants made by the Company: 

    (a)        The Company has all necessary corporate
power and authority to issue, execute and deliver this Warrant and to perform its obligations hereunder. This Warrant has been duly authorized issued, executed and delivered by the Company and is the valid and binding obligation of the Company,
enforceable in accordance with its terms, except as enforceability may be limited by bankruptcy or similar laws relating to the enforcement of creditors’ rights generally. 

    (b)        The shares of Preferred Stock issuable
upon the exercise of this Warrant have been duly authorized and reserved for issuance by the Company and, when issued in accordance with the terms hereof, will be validly issued, fully paid and nonassessable. 

    (c)        The issuance, execution and delivery of
this Warrant do not, and the issuance of the shares of Preferred Stock upon the exercise of this Warrant in accordance with the terms hereof will not, (i) violate or contravene the Company’s Certificate or by-laws, or any law, statute,
regulation, rule, judgment or order applicable to the Company, (ii) violate, contravene or result in a breach or default under any contract, agreement or instrument to which the Company is a party or by which the Company or any of its assets
are bound or (iii) require the consent or approval of or the filing of any notice or registration with any person or entity (other than such notices or filings as may be required under applicable securities laws). 

    (d)        As long as this Warrant is, or any
shares of Preferred Stock issued upon exercise of this Warrant or any shares of Common Stock issued upon conversion of such shares of Preferred Stock are, issued and 

  
 5. 

 
outstanding, the Company will provide to the Holder the financial and other information described in that certain Loan and Security Agreement No. 4561 between the Company and Lighthouse
Capital Partners V, L.P. dated as of March 29, 2005, as amended. 

(e)        As of the date hereof, the authorized capital stock of the
Company consists of (i) 28,847,292 shares of Common Stock, of which 3,240,108 shares are issued and outstanding and a sufficient number of which are reserved for issuance upon conversion of the Prior Preferred Stock into Common Stock in the
event that this Warrant is exercised with respect to Prior Preferred Stock, (ii) 779,220 shares of Series A Preferred Stock, of which 657,132 are issued and outstanding shares, (iii) 1,845,907 shares of Series B Preferred Stock, of which
1,835,354 are issued and outstanding shares, (iv) 4,815,606 shares of Series C Preferred Stock, of which 4,619,039 are issued and outstanding shares, (v) 3,989,217 shares of Series D Preferred Stock, of which 3,771,976 are issued and
outstanding shares, (vii) 106,122 shares of Series D-1 Preferred Stock, none of which are issued and outstanding shares, (vii) 7,802,775 shares of Series E Preferred Stock, of which 6,829,104 are issued and outstanding shares, and
(ix) 257,108 shares of Series E-1 Preferred Stock, none of which are issued and outstanding shares. The Company has delivered a capitalization table to Holder summarizing the capitalization of the Company, a copy of which is attached hereto as
Exhibit B. At the request of Holder, not more than once per calendar quarter, the Company will provide Holder with a current capitalization table indicating changes, if any, to the number of outstanding shares of common stock and preferred stock.

 16.        Registration Rights.  The Company grants,
upon effectiveness of the Rights Agreement referenced herein, to the Holder all the rights of a “Holder” and a “Warrantholder” under the Company’s Ninth Amended and Restated Investors Rights Agreement dated as of
November 16, 2009, as amended from time to time (the “Rights Agreement”), including, without limitation, the registration rights contained therein, and agrees to solicit approval to amend the Rights Agreement so that
(i) the shares of Common Stock issuable upon conversion of the shares of Preferred Stock issuable upon exercise of this Warrant shall be “Registrable Securities,” and (ii) the Holder shall be a “Holder” and a
“Warrantholder” for all purposes of such Rights Agreement. 

17.        Amendment.  The terms of this Warrant may be amended,
modified or waived only with the written consent of the Holder and the Company. 

18.        Representations and Covenants of the
Holder.    This Warrant has been entered into by the Company in reliance upon the following representations and covenants of the Holder, which by its execution hereof the Holder hereby confirms: 

(a)        Investment Purpose.    The right to
acquire Preferred Stock or the Preferred Stock issuable upon exercise of the Holder’s rights contained herein will be acquired for investment and not with a view to the sale or distribution of any part thereof, and the Holder has no present
intention of selling or engaging in any public distribution of the same except pursuant to a registration or exemption. 
 (b)        Accredited Investor.  Holder is an “accredited investor” within the meaning of Rule 501 of Regulation D, promulgated under the
1933 Act as presently in effect. 
 (c)        Private
Issue.  The Holder understands (i) that neither the issuance of this Warrant nor the issuance of any shares of the Company’s capital stock issuable upon exercise of the Holder’s rights contained herein has been
registered under the 1933 Act or qualified under applicable state securities laws on the ground that the issuances contemplated by this Warrant will be exempt from the registration and qualifications requirements thereof, and (ii) that the
Company’s reliance on such exemption is predicated on the representations of the Holderset forth in this Section 18. 
 (d)        Financial Risk.    The Holder has such knowledge and experience in financial and business matters as to be capable of
evaluating the merits and risks of its investment and has the ability to bear the economic risks of its investment. 

  
 6. 

 19.        Notices, Transfers,
Etc. 
 (a)        Any notice or written communication
required or permitted to be given to the Holder may be given by certified mail or delivered to the Holder at the address most recently provided by the Holder to the Company. 

(b)        Subject to compliance with applicable federal and state
securities laws, this Warrant may be transferred by the Holder with respect to any or all of the shares purchasable hereunder. Upon surrender of this Warrant to the Company, together with the assignment notice annexed hereto duly executed, for
transfer of this Warrant as an entirety by the Holder, the Company shall issue a new warrant of the same denomination to the assignee. Upon surrender of this Warrant to the Company, together with the assignment hereof properly endorsed, by the
Holder for transfer with respect to a portion of the shares of Preferred Stock purchasable hereunder, the Company shall issue a new warrant to the assignee, in such denomination as shall be requested by the Holder hereof, and shall issue to such
Holder a new warrant covering the number of shares in respect of which this Warrant shall not have been transferred. 
 (c)        In case this Warrant shall be mutilated, lost, stolen or destroyed, the Company shall issue a new warrant of like tenor and denomination and
deliver the same (i) in exchange and substitution for and upon surrender and cancellation of any mutilated Warrant, or (ii) in lieu of any Warrant lost, stolen or destroyed, upon receipt of an affidavit of the Holder or other evidence
reasonably satisfactory to the Company of the loss, theft or destruction of such Warrant 

20.        No Impairment.  The Company will not, by amendment of
its Certificate or through any reclassification, capital reorganization, consolidation, merger, sale or conveyance of assets, dissolution, liquidation, issue or sale of securities or any other voluntary action, avoid or seek to avoid the observance
of performance of any of the terms of this Warrant, but will at all times in good faith assist in the carrying out of all such terms and in the taking of all such action as may be necessary or appropriate in order to protect the rights of the
Holder. In no event shall any reclassification, capital reorganization, consolidation, merger, sale or conveyance of assets, dissolution, liquidation, issue or sale of securities or any other transaction be deemed an “impairment” for
purposes of this Section 20 if the shares of the Company’s capital stock issuable upon exercise of this Warrant are affected thereby in the same manner as outstanding shares of such capital stock. 

21.        Governing Law.  The provisions and terms of this
Warrant shall be governed by and construed in accordance with the internal laws of the State of California without giving effect to its principles regarding conflicts of laws. 

22.        Successors and Assigns.  This Warrant shall be
binding upon the Company’s successors and assigns and shall inure to the benefit of the Holder’s successors, legal representatives and permitted assigns. 

23.        Business Days.  If the last or appointed day for the
taking of any action required or the expiration of any rights granted herein shall be a Saturday or Sunday or a legal holiday in California, then such action may be taken or right may be exercised on the next succeeding day which is not a Saturday
or Sunday or such a legal holiday. 

24.        Value.  The Company and the Holder agree that the
value of this Warrant on the date of grant is $100. 
  

			
	 FLUIDIGM CORPORATION

		
	 By:
	 	 /s/ Gajus V.
Worthington

			
		
	 Name:
	 	 Gajus V.
Worthington

			
		
	 Title:
	 	 CEO

  
 7. 

 Subscription 

 

			
	 To:
	 	  

			
		
	 Date:
	 	  

The undersigned hereby subscribes for
                     shares of Preferred Stock covered by this Warrant. The certificate(s) for such shares shall be issued in the name of the
undersigned or as otherwise indicated below: 
  

	
	  

	 Signature

	
	  

	 Name for Registration

	
	  

	 Mailing Address

 Net Issue Election Notice 

 

			
	
To:                             
                                         
          
	 	Date:                          
              

 The undersigned hereby
elects under Section 4 to surrender the right to purchase shares of Preferred Stock pursuant to this Warrant. The certificate(s) for such shares issuable upon such net issue election shall be issued in the name of the undersigned or as
otherwise indicated below: 
  

	
	  

	 Signature

	
	  

	 Name for Registration

	
	  

	 Mailing Address

 Assignment 
 For value received
                                         
                                        hereby
sells, assigns and transfers unto 
   

 
  

 
 [Please print or typewrite name and
address of Assignee] 
  
  

the within Warrant, and does hereby irrevocably constitute and appoint
                                        
                                        
its attorney to transfer the within Warrant on the books of the within named Company with full power of substitution on the premises. 
  

			
	 Dated:
	 	  

	
	  

	 Signature

	
	  

	 Name for Registration

	
	 In the Presence of:

	
	  

 EXHIBIT A 

Third Amended and Restated Certificate of Incorporation 
 Superseded by Exhibit 3.1 to the registrant’s Registration Statement on Form S-1 filed with the Securities and 
 Exchange Commission on December 3, 2010. 

 EXHIBIT B 

Capitalization Table 
 See attached pages. 

  

													
	 Fluidigm Corporation
 Fully Diluted Capitalization Table (Issued and Outstanding Shares) - Summary

As of 06/17/2010
  
	   
   
   

	 	  	 Issued and
 Outstanding
 Shares

 
	 	  	CSE 
Shares*	 	  	 Total Fully
 Diluted Shares
	 
	 COMMON STOCK (Authorized: 28,847,292)
	  				  				  			
	 Issued and Outstanding
	  	 	3,240,108	  	  	 	3,240,108	  	  	 	3,240,108	  
				
	 PREFERRED STOCK (Authorized: 19,595,955)
	  				  				  			
	 SERIES A Preferred Stock (Authorized: 779,220)
	  	 	657,132	  	  	 	657,132	  	  			
	 SERIES B Preferred Stock (Authorized: 1,845,907)
	  	 	1,835,354	  	  	 	1,835,354	  	  			
	 SERIES C Preferred Stock (Authorized: 4,815,606)
	  	 	4,619,039	  	  	 	4,619,039	  	  			
	 SERIES D Preferred Stock (Authorized: 3,989,217)
	  	 	3,771,976	  	  	 	3,771,976	  	  			
	 SERIES E Preferred Stock (Authorized: 7,802,775)
	  	 	6,829,104	  	  	 	6,829,104	  	  			
	 SERIES D-1 Preferred Stock (Authorized: 106,122)
	  	 	0	  	  	 	0	  	  			
	 SERIES E-1 Preferred Stock (Authorized: 257,108)
	  	 	0	  	  	 	0	  	  	 	17,712,605	  
				
	 WARRANTS
	  				  				  			
	 COMMON Stock
	  	 	0	  	  	 	0	  	  			
	 SERIES C Stock
	  	 	13,859	  	  	 	13,859	  	  			
	 SERIES D Stock
	  	 	10,714	  	  	 	10,714	  	  			
	 SERIES E Stock
	  	 	380,906	  	  	 	380,906	  	  			
	 SERIES D-1 Stock
	  	 	106,122	  	  	 	106,122	  	  			
	 SERIES E-1 Stock
	  	 	257,108	  	  	 	257,108	  	  	 	768,709	  
				
	 2009 Stock Plan (Reserved: 3,140,465)
	  				  				  			
	 Shares Issuable Under Plan:
	  				  				  			
	 Options and SPRs Issued and Outstanding
	  	 	2,228,230	  	  	 	2,228,230	  	  			
	 Options and SPRs Committed for Issuance
	  	 	0	  	  	 	0	  	  			
	 Shares Remaining for Issuance Under Plan
	  	 	912,235	  	  	 	912,235	  	  	 	3,140,465	  
				
	 Reserved in Plan
	  	 	3,140,465	  	  	 	3,140,465	  	  			
	 less: Options Exercised
	  	 	0	  	  	 	0	  	  			
	 less: SPRs Exercised
	  	 	0	  	  	 	0	  	  			
		  	 	3,140,465	  	  	 	3,140,465	  	  			
				
	 1999 Plan (Reserved: 2,087,763)
	  				  				  			
	 Shares Issuable Under Plan:
	  				  				  			
	 Options Issued and Outstanding
	  	 	746,715	  	  	 	746,715	  	  			
	 Options Committed for Issuance
	  	 	0	  	  	 	0	  	  			
	 Shares Remaining for Issuance Under Plan
	  	 	0	  	  	 	0	  	  	 	746,715	  
				
	 Reserved in Plan
	  	 	2,087,763	  	  	 	2,087,763	  	  			
	 less: Options Exercised
	  	 	1,457,474	  	  	 	1,457,474	  	  			
	 add: Repurchases
	  	 	116,426	  	  	 	116,426	  	  			

													
				
		  	 	746,715	  	  	 	746,715	  	  			
				
	 NON PLAN SPRS
	  				  				  			
	 Common Stock
	  	 	0	  	  	 	0	  	  	 	0	  
				
	 CONVERTIBLE PROMISSORY NOTES
	  				  				  			
	 CONVERTIBLE PROMISSORY NOTES
	  	 	0	  	  	 	0	  	  	 	0	  
		  				  				  			
	 Total shares issued and outstanding, including shares
committed for issuance and employee reserves,
assuming conversion of all
convertible securities and
exercise of all outstanding options
	  				  				  	 	25,608,602	  

 CSE Shares* Common Stock Equivalent (CSE) shares reflects the Common Stock issuable for the security type (option, stock, warrant, CPN) after the appropriate conversion ratio is applied to each
individual outstanding security for the applicable security type, using standard rounding. 
 Footnotes: 

 

									
	  

Fully-Diluted Ownership

 
	  				  			
	 	  	 Number of
 Shares
  
	 	  	 %
  
	 
	 Common Stock
	  	 	3,240,108	  	  	 	12.65%	  
	 SERIES A Preferred Stock
	  	 	657,132	  	  	 	2.57%	  
	 SERIES B Preferred Stock
	  	 	1,835,354	  	  	 	7.17%	  
	 SERIES C Preferred Stock
	  	 	4,619,039	  	  	 	18.04%	  
	 SERIES D Preferred Stock
	  	 	3,771,976	  	  	 	14.73%	  
	 SERIES E Preferred Stock
	  	 	6,829,104	  	  	 	26.67%	  
	 SERIES D-1 Preferred Stock
	  				  	 	0.00%	  
	 SERIES E-1 Preferred Stock
	  				  	 	0.00%	  
	 COMMON Warrants
	  				  	 	0.00%	  
	 SERIES C Warrants
	  	 	13,859	  	  	 	0.05%	  
	 SERIES D Warrants
	  	 	10,714	  	  	 	0.04%	  
	 SERIES E Warrants
	  	 	380,906	  	  	 	1.49%	  
	 SERIES D-1 Warrants
	  	 	106,122	  	  	 	0.41%	  
	 SERIES E-1 Warrants
	  	 	257,108	  	  	 	1.00%	  
	 Options and SPRs issued and outstanding under plan - 2009 Stock Plan
	  	 	2,228,230	  	  	 	8.70%	  
	 Committed for Issuance - 2009 Stock Plan
	  				  	 	0.00%	  
	 Unissued Reserve - 2009 Stock Plan
	  	 	912,235	  	  	 	3.56%	  
	 Options and SPRs issued and outstanding under plan - 1999 Plan
	  	 	746,715	  	  	 	2.92%	  
	 Committed for Issuance - 1999 Plan
	  				  	 	0.00%	  
	 Unissued Reserve - 1999 Plan
	  				  	 	0.00%	  
	 Non Plan Common SPR
	  				  	 	0.00%	  
	  

Total

 
	  	  
  

 
	  
 25,608,602

 
	  
   

 
	  	  
  

 
	  
 100%Negative Pledge Agreement

 Exhibit 4.6E 

NEGATIVE PLEDGE AGREEMENT 
 THIS NEGATIVE PLEDGE AGREEMENT is made as of March 29, 2005, by and between FLUIDIGM CORPORATION (“Borrower”) and LIGHTHOUSE CAPITAL PARTNERS V, L.P.
(“Lender”). 
 In consideration of the Loan and Security Agreement between the parties of proximate date
herewith (the “Loan Agreement”), Borrower agrees as follows: 
 Except as otherwise permitted in the Loan
Agreement, Borrower shall not sell, transfer, assign, mortgage, pledge, lease, grant a security interest in, or encumber any of Borrower’s owned intellectual property, including, without limitation, the following: 

(a)        Any and all copyright rights, copyright applications, copyright registration and like
protection in each work or authorship and derivative work thereof, whether published or unpublished and whether or not the same also constitutes a trade secret, now or hereafter existing, created, acquired or held (collectively, the
“Copyrights”); 
 (b)        Any and all trade secrets, and any and all
intellectual property rights in computer software and computer software products now or hereafter existing, created, acquired or held; 
 (c)        Any and all design rights which may be available to Borrower now or hereafter existing, created, acquired or held; 

(d)        All patents, patent applications and like protections, including, without limitation,
improvements, divisions, continuations, renewals, reissues, extensions and continuations-in-part of the same, including, without limitation, the patents and patent applications (collectively, the “Patents”); 

(e)        Any trademark and servicemark rights, whether registered or not, applications to
register and registrations of the same and like protections, and the entire goodwill of the business of Borrower connected with and symbolized by such trademarks (collectively, the “Trademarks”); 

(f)        Any and all claims for damages by way of past, present and future infringements of any
of the rights included above, with the right, but not the obligation, to sue for an collect such damages for said use or infringement of the intellectual property rights identified above; 

(g)        Any and all licenses or other rights to use any of the Copyrights, Patents or
Trademarks and all license fees and royalties arising from such use to the extent permitted by such license or rights 

(h)        Any and all amendments, extensions, renewals and extensions of any of the Copyrights,
Patents or Trademarks; and 
 (i)        Any and all proceeds and products of the
foregoing, including, without limitation, all payments under insurance or any indemnity or warranty payable in respect of any of the foregoing. 

It shall be an Event of Default under the Loan Agreement if there is a breach of any term of this Negative Pledge Agreement. Borrower agrees to properly
execute all documents reasonably required by Lender in order to fulfill the intent and purposes hereof. 
  

							
	FLUIDIGM CORPORATION	 	LIGHTHOUSE CAPITAL PARTNERS V, L.P.
				
	 By:
	 	 /s/ Gajus Worthington
	 	By:	 	LIGHTHOUSE MANAGEMENT PARTNERS V, L.L.C.,
its general partner
				
	 Name:
	 	Gajus Worthington	 	By:	 	 /s/ Thomas Conneely

				
	 Title:
	 	President & CEO	 	Name:	 	Thomas Conneely
				
		 		 	Title:	 	Vice President

 

 

 March 29, 2005 
 Lighthouse Capital Partners V, L.P. 
 500 Drakes Landing Road 

Greenbrae, CA 94904 

    Re: Management Rights 
 Ladies and Gentlemen: 
 This letter will confirm our agreement that pursuant to
and effective as of the date hereof Fluidigm Corporation (the “Company”) shall grant Lighthouse Capital Partners V, L.P. (the “Investor”) the following contractual management rights, in addition to any rights to
non-public financial information, inspection rights, and other rights specifically provided to Investor under that certain Loan and Security Agreement of even date herewith (the “Loan Agreement”): 

1. If Investor is not represented on Company’s Board of Directors, Investor shall be entitled to consult with and advise
management of the Company on significant business issues, including management’s proposed annual operating plans, and management will meet with Investor regularly during each year at the Company’s facilities at mutually agreeable times for
such consultation and advice and to review progress in achieving said plans. 
 2. Investor may examine the books and
records of the Company and inspect its facilities and may request information at reasonable times and intervals concerning the general status of the Company’s financial condition and operations, provided that access to highly confidential
proprietary information and facilities need not be provided. 
 3. If Investor is not represented on the Company’s
Board of Directors, the Company shall, concurrently with delivery to the Board of Directors, give a representative of Investor copies of all notices, minutes, consents and other material that the Company provides to its directors, except that the
representative may be excluded from access to any material or meeting or portion thereof if the Board of Directors determines in good faith, upon advice of counsel, that such exclusion is reasonably necessary to preserve the attorney-client
privilege, to protect highly confidential proprietary information, or for other similar reasons. Upon reasonable notice and at a scheduled meeting of the Board or such other time, if any, as the Board may determine in its sole discretion, such
representative may address the Board with respect to Investor’s concerns regarding significant business issues facing the Company. 
 Investor agrees that any confidential information provided to or learned by it in connection with it rights under this letter shall be subject to the confidentiality provisions set forth in that certain
Investor’s Rights Agreement dated December 18, 2003. 

 The rights described herein shall terminate and be of no further force or effect upon
(a) such time as both (i) the Loan Agreement has been terminated following the repayment by the Company of all amounts owed to Investor under the Loan Agreement and (ii) neither the Investor nor any of its affiliates holds any shares
of the Company’s capital stock or warrants to purchase shares of the Company’s capital stock; (b) the consummation of the sale of the Company’s securities pursuant to a registration statement filed by the Company under the
Securities Act of 1933, as amended, in connection with the firm commitment underwritten offering of its securities to the general public or (c) the consummation of a merger or consolidation of the Company that is effected (i) for
independent business reasons unrelated to extinguishing such rights and (ii) for purposes other the (A) the reincorporation of the Company in a different state or (B) the formation of a holding company that will be owned exclusively
by the Company’s stockholders and will hold all of the outstanding shares of capital stock of the Company’s successor. The confidentiality obligations referenced here will survive any such termination. 

 

							
	 Very truly yours,
	 	Agreed and Accepted:
		
	FLUIDIGM CORPORATION	 	LIGHTHOUSE CAPITAL PARTNERS V, L.P.
				
	 By:
	 	 /s/ Gajus Worthington
	 	By:	 	LIGHTHOUSE MANAGEMENT PARTNERS V, L.L.C.,
its general partner
				
	 Name:
	 	Gajus Worthington	 	By:	 	 /s/ Thomas Conneely

				
	 Title:
	 	President & CEO	 	Name:	 	Thomas Conneely
				
		 		 	Title:	 	Vice President

Source: [{"source": "alea-institute/alea-institute/kl3m-data-edgar-agreements/train-00181-of-00352.parquet"}, [{"source": "alea-institute/alea-institute/kl3m-data-edgar-agreements/train-00181-of-00352.parquet"}]]