Document:

EX-10.1

 Exhibit 10.1 
 AMENDMENT NO. 1 TO 
 SHAREHOLDERS AGREEMENT 

AMENDMENT NO. 1 TO SHAREHOLDERS AGREEMENT, dated as of May 8, 2013, by and among Quintiles Transnational Holdings Inc., a North
Carolina corporation (the “Company”), and certain of the Company’s shareholders identified below (the “Amendment”). Capitalized terms used herein but not defined shall have the meaning ascribed to such terms in
the Shareholders Agreement (as defined below). Except as provided herein, all other terms, conditions and provisions of the Shareholders Agreement shall remain in full force and effect. 

RECITALS 

WHEREAS, in connection with a statutory share exchange between Quintiles Transnational Corp., a North Carolina corporation
(“QTRN”), and the Company on December 14, 2009, the Company assumed the rights and obligations of QTRN as set forth in that certain Shareholders Agreement, dated as of January 22, 2008, by and among QTRN and the
Shareholders named therein (as supplemented by the Supplement to Shareholders Agreement, dated August 9, 2012, by and among the Company and certain of the Company’s shareholders identified therein, the “Shareholders
Agreement”); 
 WHEREAS, Section 5.2 of the Shareholders Agreement provides that the Shareholders Agreement may be
amended by a written instrument signed by the Company, the Bain Shareholders, the Temasek Shareholders, the TPG Shareholders, the DG Shareholders and the 3i Shareholders, subject to certain exceptions described therein; 

WHEREAS, in accordance with Section 5.5 of the Shareholders Agreement, for action to be taken by any of the Shareholder groups
described above, the holders of more than 50% of the Common Stock of the Company then held by that group must vote in favor of the action; 
 WHEREAS, the parties to this Amendment desire to amend the Shareholders Agreement in connection with a proposed initial public offering of the Company; and 

WHEREAS, contemporaneously with and in consideration of the execution of this Amendment, (i) the Company is adopting the Second
Amended and Restated Certificate of Incorporation, (ii) the Company and certain shareholders identified therein are entering into the Second Amended and Restated Registration Rights Agreement, and (iii) QTRN is entering into Amendment
No. 1 to the Management Agreement, dated January 22, 2008, by and among QTRN, Bain Capital Partners, LLC, GF Management Company, LLC, TPG Capital, L.P., Cassia Fund Management Pte Ltd., 3i Corporation and Aisling Capital, LLC. 

AGREEMENT 
 NOW,
THEREFORE, in consideration of the foregoing and the mutual covenants and agreements contained herein, and intending to be legally bound hereby, the Company and the Shareholders named above hereby agree as follows: 

 1. The definition of “NovaQuestTM Investments” in Section 1.1 of the Shareholders Agreement
is hereby deleted. 
 2. The definition of a “Qualifying Offering” in Section 1.1 of the Shareholders Agreement
is hereby amended by adding the following language at the end of the definition: 
 “; provided, however,
that the consummation of the offering of the shares registered on the Company’s Form S-1 Registration Statement, File No. 333-186708, shall be deemed to be a Qualifying Offering.” 

3. Section 3.1(a) is hereby amended by (i) deleting the sentence “Additionally, the 3i Shareholders shall have the right
to appoint one (1) observer to the Board (the ‘3i Observer’)” in its entirety and (ii) deleting the sentence “Additionally, the 3i Observer initially shall be Denis Ribon” in its entirety. 

4. A new Section 3.1(c) of the Shareholders Agreement shall be inserted as follows: 

“(c) Compensation. Following a Qualified Offering, no director shall be eligible to receive compensation from
the Company for serving as a director unless such director has been affirmatively determined by the Board to be an “independent director” under applicable law and in accordance with the rules and regulations of the Commission and the NYSE
(or any other applicable SRO) (an “Independent Director”).” 
 5. A new Section 3.1(d) of the
Shareholders Agreement shall be inserted as follows: 
 “(d) Nomination. With respect to any Nominee
that is designated by a Shareholder Group pursuant to such Shareholder Group’s right to designate such Nominee, the Company shall use its reasonable best efforts to cause the Board and Governance, Quality and Nominating Committee to, if
applicable (i) include such Nominee in the slate of nominees recommended by the Board for the applicable class of directors for election by the shareholders of the Company or (ii) appoint such Nominee to fill a vacancy on the Board created
by the departure of a Nominee designated by such Shareholder Group. The Company agrees to include such Nominee in the applicable proxy statement for such shareholder meeting.” 

6. Section 3.4(a) of the Shareholders Agreement shall be amended and replaced as follows: 

“(a) Committees. The Board shall designate an Audit Committee, a Compensation and Talent Development
Committee, and a Governance, Quality and Nominating Committee. Notwithstanding anything contained herein to the contrary, the Board may act to change the title and function of the committees of the Board, provided that at all times the Company shall
maintain any committee of the Board that is required under applicable law and pursuant to applicable rules and regulations of the Commission and the NYSE (or any other applicable SRO). Except as provided below, the composition of all committees of
the Board shall be as determined by the Board, provided, that the Bain Shareholders as a group, the DG Shareholders as a group, the TPG Shareholders as a group and the 3i Shareholders as a group shall each have the right to designate at least one
director to serve on each current and any future committee of the Board, other than the Audit Committee, which shall be comprised initially of the Disinterested Nominees; provided, however, a Nominee of the DG Shareholders, the Bain Shareholders,
the TPG Shareholders or the 3i Shareholders may serve on a committee only to the 

  
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 extent such Nominee is permitted to serve on such committee under applicable law and
pursuant to applicable rules and regulations of the Commission and the NYSE (or other applicable SRO).” 
 7.
Section 3.4(c) of the Shareholders Agreement shall be amended and replaced as follows: 
 “(c)
Certain Transactions and Investment Decisions. Notwithstanding anything to the contrary herein, after the Effective Date (i) any asset divestiture by the Company or Subsidiary of the Company in excess of $10 million shall require the
affirmative vote of a majority of the Board and (ii) any transactions (other than the Recapitalization Transaction) entered into between the Company or any of its Subsidiaries, on the one hand, and any Shareholder or Affiliate or Associate of
any Shareholder, on the other hand (an “Affiliate Transaction”), shall require the affirmative vote of a majority of the Board with the Nominee(s) of the interested Shareholder abstaining from such vote. Each Shareholder shall
promptly inform the Company and such Shareholder’s Nominees, if any, of any proposed Affiliate Transaction with an Affiliate or Associate of such Shareholder; provided, however, that in the event that a Shareholder is not aware, and, in the
ordinary course of its business could not reasonably be expected to be aware, that a proposed transaction is an Affiliate Transaction with an Affiliate or Associate of such Shareholder, such Affiliate Transaction shall not be deemed to violate
clause (ii) of the immediately preceding sentence.” 
 8. Section 3.5 of the Shareholders Agreement is hereby
amended by deleting the proviso at the end thereof and replacing it with the following: 
 “With respect to
clauses (A), (B) and (C) of this Section 3.5, such five and ten percent threshold, as the case may be, shall be calculated using the basic weighted average number of shares of the Company’s Common Stock outstanding for the most
recent fiscal period disclosed in the Company’s filings with the Commission; provided, that any of the following shall be excluded from such calculation: (i) shares of Common Stock issued by the Company in connection with an
acquisition by the Company approved by the Board and (ii) shares of Common Stock issued by the Company (other than the Qualifying Offering and any shares of Common Stock issued in connection with a registration relating to the sale of
securities to participants in a Company employee stock option, stock purchase or similar employee benefit plan registered on Form S-8). Once any Shareholder Group no longer has the right to designate a Nominee as described earlier in this paragraph,
such Shareholder Group shall (i) promptly notify the Company in writing of such fact and (ii) if requested in writing by a majority of the Independent Directors of the Company, cause a director designated as a Nominee of such Shareholder
Group to tender his or her resignation from the Board, which shall be effective immediately prior to the next annual meeting of shareholders of the Company (regardless of whether the term of the director so resigning would otherwise expire at that
meeting) or at any earlier date, in the discretion of the director. In considering whether to request such a resignation, the Independent Directors of the Company shall comply with the procedures set forth in a Policy for Independent Director
Consideration of Board Resignations, which shall have been approved by the Board.” 

  
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 9. A new Section 3.10 of the Shareholders Agreement shall be inserted as follows:

 “3.10. Procedures Regarding Certain Corporate Opportunities. 

(a) In the event that a director of the Company who was designated as a Nominee to the Board by an Exempted Person’s
applicable Shareholder Group has actual knowledge that an investment has been made after the date hereof in a Competitor by a late stage private equity fund managed by an Exempted Person, such Exempted Person shall notify the Company thereof as
promptly as practicable after the making of such investment and cooperate reasonably with the Company at its request to create appropriate protective procedures with respect to the flow of information; provided that the foregoing shall not be
required if prohibited by law, regulation, contractual obligation or otherwise. This provision is in addition to any other duties the designated Nominee may have at law as a result of the investment, after giving effect to any provisions in the
Company’s Articles of Incorporation relating to corporate opportunities. Solely for purposes of this Section 3.10 (i) “Competitor” means any pharmaceutical services organization that provides either clinical research
or contract sales services to customers in the pharmaceutical, biotechnology or medical device industries; provided, that a fully integrated pharmaceutical, biotechnology or medical device company that may occasionally provide these types of
services to third parties, but that does not derive significant revenues from such services, shall not be deemed a “Competitor” pursuant to this Section 3.10 and (ii) “Exempted Person” shall have the meaning
ascribed to such term in the Company’s Articles of Incorporation. 
 (b) Notwithstanding any provisions in
the Company’s Articles of Incorporation relating to corporate opportunities, prior to any investment in any of Pharmaceutical Product Development, Inc., Covance, Inc., PAREXEL International Corporation, inVentiv Health, Inc., ICON plc, PRA
International, Inc., PDI, Inc., Publicis Touchpoint Solutions, Inc., United Drug plc, or any of their successors or controlled affiliates, by a late stage private equity fund managed by an Exempted Person, such Exempted Person shall give written
notice of such proposed investment to the Board and shall not consummate such investment unless it is approved by a disinterested majority of the Board in its discretion (which approval shall be deemed to have been given if the Board does not notify
such Exempted Person otherwise within 21 days of the notice of the proposed investment having been received). A violation of this Section 3.10(b) shall not be subject to any limitations on liability contained in any provisions related to
corporate opportunities in the Company’s Articles of Incorporation. For the avoidance of doubt, the restrictions contained in this Section 3.10(b) shall not apply to any hedge fund, venture fund, debt fund or other non late stage private
equity fund managed by an Exempted Person.” 
 10. Section 4.3 of the Shareholders Agreement is hereby amended by
deleting the reference to “Section 4.1 of the Registration Rights Agreement” contained therein and replacing it with a reference to “Section 5.1 of the Registration Rights Agreement.” 

11. The first sentence of Section 5.4(a) of the Shareholders Agreement is hereby amended by inserting the following at the end of
the second proviso thereof: 
 “, provided, further, that with respect to each of the Temasek Shareholders,
the Institutional Shareholders, the Management Shareholders, and Cynthia M. Roberts, this Agreement shall automatically terminate (including, for the avoidance of doubt, any and all provisions related to the Temasek Nominee) immediately prior to the
effective date of the Company’s Form S-1 

  
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Registration Statement, File No. 333-186708, and, for the avoidance of doubt, such termination with respect to such Shareholders shall not be subject to the provisions of subsection
(b) below.” 
 12. The last sentence of Section 5.4(a) of the Shareholders Agreement is hereby deleted and
replaced with the following: 
 “Upon termination of this Agreement, Article I (including, for the avoidance of doubt, any
terms not defined therein but referenced in Section 1.1(c)) and Article V (except for the second sentence of Section 5.2) shall survive termination.” 
 13. Section 5.4(b)(ii) of the Shareholders Agreement is hereby deleted and replaced in its entirety with “(ii) [Reserved], and.” 

14. Section 5.4(b)(iii) of the Shareholders Agreement is hereby amended by deleting “, Temasek Shareholders” contained
therein. 
 15. Section 5.4(c) of the Shareholders Agreement is hereby amended by deleting the proviso at the end thereof.

 This Amendment may be executed in any number of counterparts, each of which will be deemed an original, but all of which
together will constitute one and the same instrument. 
 [Signature Pages Follow] 

  
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 [Signature Page to Amendment to Shareholders Agreement] 

IN WITNESS WHEREOF, the Company and the Shareholders listed below have executed and delivered this Amendment No. 1 to the
Shareholders Agreement as of the date first above written. 
  

			
	Company:
	
	QUINTILES TRANSNATIONAL HOLDINGS INC.
	
		
	By:	 	 /s/ James H. Erlinger III

		 	Name: James H. Erlinger III
		 	Title: EVP, General Counsel & Secretary

 [Signature Page to Amendment to Shareholders Agreement] 

 

			
	DG Shareholders:
	
	 /s/ Dennis B. Gillings

	Dennis B. Gillings, CBE
	
	 /s/ Cynthia M. Roberts

	Cynthia M. Roberts

  

					
	Bain Shareholders:
	
	BAIN CAPITAL INTEGRAL INVESTORS 2008, L.P.
	
	By: Bain Capital Investors, LLC, its general partner
			
		 	By:	 	 /s/ Chris Gordon

		 	Name:	 	
		 	Title:	 	Managing Director

  

			
	Temasek Shareholders:
	
	TEMASEK LIFE SCIENCES PRIVATE LIMITED
		
	By:	 	 /s/ Tan Suan Swee

		 	Name: Tan Suan Swee
		 	Title: Authorised Signatory

  

			
	TPG Shareholders:
	
	TPG QUINTILES HOLDCO II LLC
		
	By:	 	 /s/ Ronald Cami

		 	Name: Ronald Cami
		 	Title: Vice President

 [Signature Page to Amendment to Shareholders Agreement] 

 

					
	3i Shareholders:
	
	3i US GROWTH HEALTHCARE FUND 2008 L.P.
		
	By:	 	3i CORPORATION
	Its:	 	Manager
			
		 	By:	 	 /s/ Ken Hanau

		 	Name:	 	
		 	Title:	 	

  

			
	Institutional Shareholders:
	
	AISLING CAPITAL II, L.P.
		
	By:	 	 /s/ Lloyd Appel

	Name:	 	Lloyd Appel
	Title:	 	CFO
	
	PERSEUS-SOROS BIOPHARMACEUTICAL FUND, L.P.
		
	By:	 	 /s/ Lloyd Appel

	Name:	 	Lloyd Appel
	Title:	 	CFO
	
	Management Shareholders:
	
	 /s/ Thomas H. Pike

	Thomas H. PikeEX-10.2

 Exhibit 10.2 
 AMENDMENT NO. 1 TO 
 MANAGEMENT AGREEMENT 

AMENDMENT NO. 1 TO MANAGEMENT AGREEMENT, dated as of May 8, 2013 (the “Amendment”), by and among Quintiles
Transnational Corp., a North Carolina corporation (the “Company”), Bain Capital Partners, LLC, a Delaware limited liability company (“Bain”), GF Management Company, LLC, a North Carolina limited liability company
(“GFM”), TPG Capital, L.P., a Texas limited partnership (“TPG”), Cassia Fund Management Pte Ltd., a Singapore corporation (“Cassia”), 3i Corporation, a Massachusetts corporation
(“3i,” and, together with Bain, GFM, TPG, 3i and Cassia, the “Managers”) and Aisling Capital, LLC (“Aisling”). Capitalized terms used herein but not defined shall have the meaning ascribed to such
terms in the Management Agreement, dated as of January 22, 2008, by and among the Company, the Managers and Aisling (the “Management Agreement”). Except as provided herein, all other terms, conditions and provisions of the
Management Agreement shall remain in full force and effect. 
 RECITALS 

WHEREAS, Section 8.2 of the Management Agreement provides that the Management Agreement may be amended by a written instrument
signed by each of the parties to the Management Agreement; 
 WHEREAS, the parties to this Amendment desire to amend the
Management Agreement in connection with a proposed initial public offering of Quintiles Transnational Holdings Inc. (“Holdings”), of which the Company is a wholly-owned subsidiary; and 

WHEREAS, contemporaneously with and in consideration of the execution of this Amendment, (i) Holdings is adopting the Second Amended
and Restated Certificate of Incorporation, (ii) Holdings and certain shareholders identified therein are entering into the Second Amended and Restated Registration Rights Agreement, (iii) Holdings and certain shareholders identified
therein are entering into Amendment No. 1 to the Shareholders Agreement and (iv) the Company and Dennis B. Gillings, Ph.D., an affiliate of GFM, are entering into the Fifth Amendment to Executive Employment Agreement to, among other
things, limit certain expense reimbursements to GFM contained therein. 
 AGREEMENT 

NOW, THEREFORE, in consideration of the foregoing and the mutual covenants and agreements contained herein, and intending to be legally
bound hereby, the Company, the Managers and Aisling hereby agree as follows: 
  

	 	1.	A new Section 6.3 of the Management Agreement shall be inserted as follows: 

“6.3 Upon the termination of this Agreement immediately prior to the effective date of a Qualifying Offering pursuant
to clause (b) of Section 6.1, the Company shall 

 
pay termination fees, equal to USD $25.0 million in the aggregate, to Bain, GFM, TPG, 3i, Cassia and Aisling, which fees shall be allocated as follows: (i) $5,934,402 to Bain,
(ii) $5,934,402 to GFM, (iii) $5,934,402 to TPG, (iv) $3,921,006 to 3i, (v) $2,525,788 to Cassia and (vi) $750,000 to Aisling.” 
  

	 	2.	A new Section 6.4 of the Management Agreement shall be inserted as follows: 

“6.4 Upon the termination of this Agreement immediately prior to the effective date of a Qualifying Offering pursuant
to clause (b) of Section 6.1, the Company shall pay to GFM an additional fee equal to USD $1,500,000, which shall be payable within ten (10) days following such Qualifying Offering.” 

This Amendment may be executed in any number of counterparts, each of which will be deemed an original, but all of which together will
constitute one and the same instrument. 
 [Signature Pages Follow] 

  
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 [Signature Page to Amendment No. 1 to Management Agreement] 

IN WITNESS WHEREOF, the Company, the Managers listed below and Aisling have executed and delivered this Amendment No. 1 to the
Management Agreement as of the date first above written. 
  

					
	QUINTILES TRANSNATIONAL CORP.
		
	By:	 	 /s/ James H. Erlinger III

		 	Name:	 	James H. Erlinger III
		 	Title:	 	EVP, General Counsel & Secretary

  

					
	BAIN CAPITAL PARTNERS, LLC
		
	By:	 	 /s/ Chris Gordon

		 	Name:	 	
		 	Title:	 	

  

					
	GF MANAGEMENT COMPANY, LLC
		
	By:	 	 /s/ Dennis Gillings

		 	Name:	 	
		 	Title:	 	

  

					
	TPG CAPITAL, LP
		
	By:	 	 /s/ Ronald Cami

		 	Name:	 	Ronald Cami
		 	Title:	 	Vice President

  

					
	CASSIA FUND MANAGEMENT PTE LTD.
		
	By:	 	 /s/ Serene Leow

		 	Name:	 	Serene Leow
		 	Title:	 	Director

 
					
	3i CORPORATION
		
	By:	 	 /s/ Ken Hanau

		 	Name:	 	Ken Hanau
		 	Title:	 	Director

  

					
	AISLING CAPITAL, LLC
		
	By:	 	 /s/ Lloyd Appel

		 	Name:	 	Lloyd Appel
		 	Title:	 	CFO

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