Document:

Salary Information for Named Executive Officers

  
 EXHIBIT 10.39

  
 SALARY INFORMATION FOR NAMED EXECUTIVE OFFICERS

  
 The table below provides information regarding the current annual salary
and 2005 target bonus amount for each “named executive officer” of Exelixis, Inc. (“Exelixis”) as of March 1, 2005. All other compensation arrangements between Exelixis and each of its named executive officers are referenced in
the Exhibit Index to this Annual Report on Form 10-K. 
  

					
	Named Executive Officer

	 	Annual Salary

	 	 Target Bonus Amount
 (percentage of annual salary)

	George Scangos	 	$675,000	 	60%
	Jeffrey Latts	 	$365,729	 	35%
	Michael Morrissey	 	$359,856	 	35%
	Frank Karbe	 	$325,500	 	45%
	Pamela Simonton	 	$301,111	 	35%1999 Non-Qualified Employee Stock Purchase Plan

 Exhibit 10.59 
  
 BOSTON PROPERTIES, INC. 
  
 1999 NON-QUALIFIED EMPLOYEE STOCK PURCHASE PLAN 
  

 TABLE OF CONTENTS 
  

							
	 Section

	  	Page

	 1.
	 	 Purpose
	  	1
			
	 2.
	 	 Definitions
	  	1
	 	 	 2.1.
	  	 Account
	  	1
	 	 	 2.2.
	  	 Beneficiary
	  	1
	 	 	 2.3.
	  	 Board
	  	1
	 	 	 2.4.
	  	 Boston Properties
	  	1
	 	 	 2.5.
	  	 Closing Price
	  	1
	 	 	 2.6.
	  	 Committee
	  	1
	 	 	 2.7.
	  	 Election Form
	  	1
	 	 	 2.8.
	  	 Election Period
	  	1
	 	 	 2.9.
	  	 Eligible Employee
	  	1
	 	 	 2.10.
	  	 Participant
	  	1
	 	 	 2.11.
	  	 Participating Employer
	  	1
	 	 	 2.12.
	  	 Plan
	  	2
	 	 	 2.13.
	  	 Plan Administrator
	  	2
	 	 	 2.14.
	  	 Purchase Period
	  	2
	 	 	 2.15.
	  	 Purchase Price
	  	2
	 	 	 2.16.
	  	 Rule 16b-3
	  	2
	 	 	 2.17.
	  	 Stock
	  	2
	 	 	 2.18.
	  	 Valuation Period
	  	2
			
	 3.
	 	 Stock Issuable
	  	2
			
	 4.
	 	 Administration
	  	2
			
	 5.
	 	 Participation
	  	3
			
	 6.
	 	 Contributions
	  	3
	 	 	 	  	 (a)  Initial Contributions
	  	3
	 	 	 	  	 (b)  Changes in Contributions and Withdrawals
	  	3
	 	 	 	  	 (c)  § 401(k) Hardship Withdrawals
	  	4
	 	 	 	  	 (d)  Account Credits, General Assets and Taxes
	  	4
	 	 	 	  	 (e)  Automatic Refunds
	  	4
			
	 7.
	 	 Purchase of Stock
	  	4
			
	 8.
	 	 Holding Period
	  	5

  

 (i) 

							
	 9.
	 	 Delivery
	  	5
			
	 10.
	 	 Designation of Beneficiary
	  	5
			
	 11.
	 	 Transferability
	  	6
			
	 12.
	 	 Amendment or Termination
	  	6
			
	 13.
	 	 Notices
	  	6
			
	 14.
	 	 Employment
	  	6
			
	 15.
	 	 Employment Transfers
	  	7
			
	 16.
	 	 Headings, References and Construction
	  	7

  

 (ii) 

	1.	Purpose 

  
 The primary purpose of this Plan is to encourage Stock ownership by each Eligible Employee in the belief that such ownership will increase his or her
interest in the success of Boston Properties. 
  

	2.	Definitions 

  
 2.1. Account shall mean the separate bookkeeping account which shall be established and maintained by the Plan Administrator for each Participant
for each Purchase Period to record the contributions made on his or her behalf to purchase Stock under the Plan. 
  
 2.2. Beneficiary shall mean the person designated as such in accordance with § 10. 
  
 2.3. Board shall mean the Board of Directors of Boston Properties.

  
 2.4. Boston Properties shall mean Boston Properties,
Inc., a corporation incorporated under the laws of the State of Delaware, and any successor to Boston Properties. 
  
 2.5. Closing Price for any day of a Valuation Period shall mean the closing price for a share of Stock as reported for such day in The Wall Street
Journal or in any successor to The Wall Street Journal or, if there is no such successor, in any trade publication selected by the Committee or, if no closing price is so reported during such Valuation Period the fair market value of a share of
Stock as determined by the Committee. 
  
 2.6. Committee
shall mean the Compensation Committee of the Board. 
  
 2.7.
Election Form shall mean the form which an Eligible Employee shall be required to properly complete in writing and timely file in order to make any of the elections available to an Eligible Employee under this Plan. 
  
 2.8. Election Period shall mean the ten day period immediately
preceding a related Purchase Period or such other extended period determined by the Plan Administrator. 
  
 2.9. Eligible Employee shall mean each officer or employee not covered by a collective bargaining agreement of Boston Properties or a Participating
Employer who is shown on the payroll records of Boston Properties or a Participating Employer as an employee. Employees who are covered by a collective bargaining agreement are not eligible to participate in this Plan unless participation herein is
provided for in such collective bargaining agreement. 
  
 2.10.
Participant shall mean (a) for each Purchase Period an Eligible Employee who has elected to purchase Stock in accordance with § 5 in such Purchase Period and (b) for any period any person for whom Stock is held pending delivery under
§ 9. 
  
 2.11. Participating Employer shall mean
Boston Properties, Boston Properties Limited Partnership, BP Management, L.P., Boston Properties Management, Inc., and any 

  

 
organization owned in whole or in part, directly or indirectly, by Boston Properties which is designated as such by the Committee. 
  
 2.12. Plan shall mean this Boston Properties, Inc. 1999 Non-Qualified
Employee Stock Purchase Plan as effective as of January 1, 1999 and as thereafter amended from time to tune. 
  
 2.13. Plan Administrator shall mean Boston Properties or its delegate. 
  
 2.14. Purchase Period shall mean a period of six months beginning each January 1 and duly 1 or such other period set
by the Committee before the beginning of the related Election Period which shall begin on a date which follows the end of such Election Period and which shall run for no more than one year. 
  
 2.15. Purchase Price for each Purchase Period shall mean a price which
is equal to 85 % of the average Closing Prices for a share of Stock during the related Valuation Period. 
  
 2.16. Rule 16b-3 shall mean Rule 16b-3 to Section 16(b) of the Securities Exchange Act of 1934, as amended, or any successor to such rule.

  
 2.17. Stock shall mean the $.01 par value common stock
of Boston Properties. 
  
 2.18. Valuation Period shall mean
the last ten business days of the related Purchase Period. 
  

	3.	Stock Issuable. 

  
 The maximum number of shares of Stock reserved and available for issuance under the Plan shall be 250,000 shares. The shares available for issuance under
the Plan may be authorized but unissued shares of Stock or shares of Stock reacquired by Boston Properties. In the event of a stock dividend, stock split or similar capitalization affecting the Stock, the Committee shall make appropriate adjustment
in the number of shares of Stock available for issuance under the Plan and the Purchase Price. 
  

	4.	Administration 

  
 Except for the exercise of those powers expressly granted to the Committee to determine the Closing Price and who is a Participating Employer and to set
the Election Period and the Purchase Period, the Plan Administrator shall be responsible for the administration of this Plan and shall have the power in connection with such administration to interpret the Plan and to take such other action in
connection with such administration as the Plan Administrator deems necessary or equitable under the circumstances. The Plan Administrator also shall have the power to delegate the duty to perform such administrative functions as the Plan
Administrator deems appropriate under the circumstances. Any person to whom the duty to 

  

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perform an administrative function is delegated shall act on behalf of and shall be responsible to the Plan Administrator for such function. Any action or
inaction by or on behalf of the Plan Administrator under this Plan shall be final and binding on each Eligible Employee, each Participant and on each other person who makes a claim under this Plan based on the rights, if any, of any such Eligible
Employee or Participant under this Plan. 
  

	5.	Participation 

  
 Each Eligible Employee who is hired prior to the last day of an Election Period shall be a Participant in this Plan for the related Purchase Period if he
or she properly completes and files an Election Form with the Plan Administrator on or before such date to elect to participate in this Plan. An Election Form may require an Eligible Employee to provide such information and to agree to take such
action (in addition to the action required under § 6) as the Plan Administrator deems necessary or appropriate in light of the purpose of this Plan or for the orderly administration of this Plan. 
  

	6.	Contributions 

  
 (a) Initial Contributions. Each Participant’s Election Form under § 5 shall specify the contributions which he or she proposes to make
for the related Purchase Period by means of payroll deduction and shall indicate whether he or she proposes to make cash contributions. Contributions by means of payroll deduction shall be expressed as a specific dollar amount or a percentage of the
Participant’s compensation that his or her Participating Employer is authorized to deduct from his or her compensation each pay day during the Purchase Period, provided 
  
 (1) the minimum payroll deduction for a Participant for each pay period for purchases under this Plan shall
be $10.00, and 
  
 (2) the maximum payroll
contribution and cash contribution which a Participant can make for purchases under this Plan for any calendar year shall be the lesser of (a) ten percent (10%) of such Participant’s base salary for such calendar year, or (b) $10,000.

  
 Any contributions which a Participant elects to make in cash
may be made at any time during a Purchase Period, up through the last day prior to the related Valuation Period. 
  
 (b) Changes in Contributions and Withdrawals. A Participant shall have the right to amend his or her Election Form after the end of an Election
Period to reduce or to stop his or her payroll contributions, and such election shall be effective as soon as practicable after the Plan Administrator actually receives such amended Election Form. A Participant also shall have the right at any time
on or before the last day prior to the related Valuation Period to withdraw (without interest) all or any part of the contributions credited to his or her Account for such Purchase Period by delivering an amended Election Form to the Plan
Administrator on or before the last day prior to the related Valuation Period. A withdrawal shall be deducted 

  

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from the Participant’s Account as of the date the Plan Administrator receives such amended Election Form, and the actual withdrawal shall be effected by
the Plan Administrator as soon as practicable after such date. 
  
 (c) § 401(k) Hardship Withdrawals. If an Eligible Employee makes a hardship withdrawal from an employee benefit plan maintained by Boston Properties or any Participating Employer and the Plan Administrator determines that such
withdrawal requires a suspension of contributions under this Plan in order for such other plan to continue to satisfy the requirements of § 401(k) of the Internal Revenue Code of 1986, as amended, the Plan Administrator shall have the right
unilaterally to suspend such contributions. 
  
 (d) Account
Credits, General Assets and Taxes. All payroll deductions made for a Participant shall be credited to his or her Account as of the pay day as of which the deduction is made. All contributions made by a Participant under this Plan, whether in
cash or through payroll deductions, shall be held by Boston Properties or by such Participant’s Participating Employer, as agent for Boston Properties. All such contributions shall be held as part of the general assets of Boston Properties and
shall not be held in trust or otherwise segregated from Boston Properties’ general assets. No interest shall be paid or accrued on any such contributions. Each Participant’s right to the contributions credited to his or her Account shall
be that of a general and unsecured creditor of Boston Properties. Each Participating Employer shall have the right to make such provisions as it deems necessary or appropriate to satisfy any tax laws with respect to purchases of Stock made under this Plan. If a Participant elects to withdraw all of his or her Account under § 6(b), his or her
status as a Participant shall terminate as of the date the Plan Administrator receives such election. 
  
 (e) Automatic Refunds. The balance credited to the Account of an Eligible Employee automatically shall be refunded in full (without interest) if
his or her status as an employee of a Participating Employer terminates for any reason whatsoever during a Purchase Period. Such refunds shall be made as soon as practicable after the Plan Administrator has actual notice of any such termination. A
person’s status as a Participant under this Plan shall terminate at the same time as his or her status as an Eligible Employee terminates. 
  

	7.	Purchase of Stock 

  
 If a Participant is an Eligible Employee through the end of a Purchase Period, the balance which remains credited to his or her Account at the end of such
Purchase Period automatically shall be applied in full to purchase Stock at the Purchase Price for such Stock for such Purchase Period. Such Stock shall be purchased on behalf of the Participant by operation of this Plan in whole shares and in any
fraction of a whole share (computed to the number of decimal places set by the Plan Administrator) which can be purchased with the remaining balance credited to the Participant’s Account. 
  

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	8.	Holding Period 

  
 If a Participant sells, exchanges, assigns, encumbers, alienates, transfers, pledges or otherwise disposes of any shares of Stock acquired at the end of a
Purchase Period within one year of such Purchase Period, then the Participant shall, on or before such sale, exchange, assignment, encumbrance, alienation, transfer, pledge or other disposition, pay to Boston Properties an amount equal to the
product of (a) the difference between (i) 100 % of the average Closing Prices for a share of Stock during the related Valuation Period of such Purchase Period and (ii) the Purchase Price of such Purchase Period, and (b) the number of such shares
sold, exchanged, assigned, encumbered, alienated, transferred, pledged or otherwise disposed of by the Participant within one year of such Purchase Period. 
  

	9.	Delivery 

  
 Unless otherwise requested by the Participant, shares of Stock purchased under the Plan will be held in the name of Boston Properties’ transfer agent
or its nominees. The number of shares credited to a Participant’s account under the Plan will be shown on his or her statement of accounts. Subject to compliance with the provisions of Section 8, upon the written request of a Participant, a
stock certificate representing any shares of Stock purchased under this Plan shall be delivered to a Participant registered in his or her name or, if the Participant so elects on such Election Form and if permissible under applicable law, in the
names of the Participant and one such other person as may be designated by the Participant, as joint tenants with rights of survivorship. However, (a) no stock certificate representing a fractional share of Stock shall be delivered to a Participant
or to a Participant and any other person, (b) cash which the Plan Administrator deems representative of the value of a Participant’s fractional share shall be distributed (when a Participant requests a distribution of all of the shares of Stock
held for such Participant) in lieu of such fractional share unless a Participant in light of Rule 16b-3 waives his or her right to such cash payment and (c) the Plan Administrator shall have the right to charge a Participant for registering Stock in
the name of a Participant and any other person. No Participant (or any person who makes a claim for on behalf of or in place of a Participant) shall have any interest in any shares of Stock under this Plan until the certificate for such shares of
Stock has been delivered to such person or such shares have been credited to a brokerage account maintained for the benefit of such person. 
  

	10.	Designation of Beneficiary 

  
 A Participant may designate on his or her Election Form a Beneficiary (a) who shall receive the balance credited to his or her Account if the Participant
dies before the end of a Purchase Period and (b) who shall receive the Stock, if any, purchased for the Participant under this Plan if the Participant dies after the end of a Purchase Period but before either the certificate representing such shares
of Stock has been delivered to the Participant or before such Stock has been credited to a brokerage account maintained for the Participant. Such designation may be revised in writing at any time by the Participant by filing an amended Election
Form, and his or her revised designation shall be effective at such time as the Plan 

  

 5 

 
Administrator receives such amended election Form. If a deceased Participant fails to designate a Beneficiary or, if no person so designated survives a
Participant or, if after checking his or her last known mailing address, the whereabouts of the person so designated are unknown, then the Participant’s estate shall be treated as his or her designated Beneficiary under this § 10.

  

	11.	Transferability 

  
 Neither the balance credited to a Participant’s Account nor any rights to receive shares of Stock under this Plan may be sold, exchanged, assigned,
encumbered, alienated, transferred, pledged or otherwise disposed of in any way by a Participant during his or her lifetime or by any other person during his or her lifetime, and any attempt to do so shall be without effect. 
  

	12.	Amendment or Termination 

  
 This Plan may be amended by the Board from time to time to the extent that the Board deems necessary or appropriate; provided, however, no amendment shall
be retroactive unless the Board in is discretion determines that such amendment is in the best interest of Boston Properties or such amendment is required by applicable law to be retroactive. The Board also may terminate this Plan and any Purchase
Period at any time (together with any related contribution elections) or may terminate any Purchase Period (together with any related contribution elections) at any time, provided, however, no such termination shall be retroactive unless the Board
determines that applicable law requires a retroactive termination of this Plan. 
  

	13.	Notices 

  
 All Election Forms and other communications from a Participant to the Plan Administrator under, or in connection with, this Plan shall be deemed to have
been filed with the Plan Administrator when actually received in the form specified by the Plan Administrator at the location, or by the person, designated by the Plan Administrator for the receipt of any such Election Form and communications.

  

	14.	Employment 

  
 The right to elect to participate in this Plan shall not constitute an offer of employment, and no election to participate in this Plan shall constitute
an employment agreement for an Eligible Employee. Any such right or election shall have no bearing whatsoever on the employment relationship between an Eligible Employee and any other person. Finally, no Eligible Employee shall be induced to
participate in this Plan, or shall participate in this Plan, with the expectation that such participation will lead to employment or continued employment. 
  

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	15.	Employment Transfers 

  
 No Eligible Employee’s employment shall be treated as terminated under this Plan as a result of a transfer between, or among, Participating
Employers. 
  

	16.	Headings, References and Construction 

  
 The headings to sections in this Plan have been included for convenience of reference only. Except as otherwise expressly indicated, all references to
sections (§) in this Plan shall be to section (§) of this Plan. This Plan shall be interpreted and construed in accordance with the laws of the State of Delaware. 
  

			
	BOSTON PROPERTIES, INC.
		
	By:	 	/s/ Robert E. Burke
		
	Title:	 	Executive Vice President

  

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