Document:

EX-10.40

 Exhibit 10.40 
  

 
 FIFTH CLOSING WARRANT AGREEMENT

 Dated as of January 12, 2010 

between 
 VIRGIN AMERICA INC.

 and 
 CAROLA
HOLDINGS LIMITED 
  
  

 This FIFTH CLOSING WARRANT AGREEMENT (this “Agreement”), dated as of
January 12, 2010, is by and between Virgin America Inc., a Delaware corporation (the “Company”) and Carola Holdings Limited, a limited liability company organized under the laws of the British Virgin Islands
(“Carola” or the “Initial Holder”). Capitalized terms used herein but not defined herein have the meanings ascribed to such terms in the Third Amended and Restated Stockholders’ Agreement, dated as of
January 12, 2010, among the Company, the Initial Holder, VAI Partners LLC, a Delaware limited liability company (the “Investor”) and the other parties named therein, as may be amended, restated or superseded from time to time
(the “Third Amended and Restated Stockholders’ Agreement”). 
 WHEREAS, the Company wishes to facilitate an agreement
among Carola and its U.S. citizen individual and institutional investors, such that it may obtain additional capital and continue to exercise the rights, privileges, and obligations of its certificate of public convenience and necessity issued by
the Department of Transportation; 
 WHEREAS, as provided in Section 1.1(h) of the Purchase and Restructuring Agreement, Carola
will pay the Company $600,000 in cash; 
 WHEREAS, pursuant to the Purchase and Restructuring Agreement, the Company wishes to issue to
Carola warrants to purchase 60,000,000 shares of non-voting, Class C Common Stock at a strike price of $5.00 per share; and 
 WHEREAS, the
Company and Carola fully recognize various limitations on the exercise of such warrants, including being subject to exercise only upon the occurrence of a Transfer of such warrants to a third party that is not an Affiliate of Carola and only when
permitted by U.S. airline citizenship requirements, currently found at 49 U.S.C. 40102 (a)(15) (the “Foreign Ownership Limitations”), as interpreted by United States Department of Transportation or any other federal department or
agency at the time administering the federal aviation laws codified in title 49 of the United States Code in applicable precedent (“DOT”). 

NOW, THEREFORE, for good and valuable consideration, the receipt and sufficiency of which is hereby acknowledged, the parties hereto hereby
agree as follows: 
 1. Grant. 

(a) The Company shall grant on the Fifth Closing Date to the Initial Holder warrants (the “Warrants”) which shall entitle the
registered holder thereof, subject to Section 3 and Section 5 below, to purchase from the Company, at any time and from time to time prior to the 30th anniversary of the Fifth Closing
Date, up to 60,000,000 fully-paid and non-assessable shares (such shares, subject to adjustment as provided in Section 7, the “Warrant Shares”) of non-voting Class C common stock, par value $0.01 per share, of the Company (the
“Class C Common Stock”), at the exercise price of $5.00 per share, subject to adjustment as provided in Section 7 (the “Exercise Price”). Pursuant to Section 4(b) below, upon exercise of the Warrants,
payment of the applicable Exercise Price shall be made, at the holder’s option, in cash or pursuant to a Cashless Exercise (as defined below). 

(b) Prior to the exercise of the Warrants, no holder of a Warrant Certificate, as such, shall be entitled to any rights of a stockholder of
the Company, including, without 

  
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limitation, the right to receive dividends or subscription rights, the right to vote, to consent, to exercise any preemptive right, to receive any notice of meetings of stockholders for the
election of directors of the Company or any other matter or to receive any notice of any proceedings of the Company, except as may be specifically provided for herein. The holders of the Warrants are not entitled to share in the assets of the
Company in the event of the liquidation, dissolution or winding up of the Company’s affairs. 
 2. Warrant Certificates. The
Warrants shall be evidenced by certificates issued pursuant to this Agreement (the “Warrant Certificates”) in the form set forth in Exhibit A hereto, with such appropriate insertions, omissions, substitutions, and other
variations as are required or permitted by this Agreement. 
 3. Exercise Period. The Warrants shall be exercisable (i) after or
in connection with a Transfer (other than a Permitted Transfer, but including a Transfer in connection with a public offering of equity securities of the Company) of such Warrants in accordance with the terms of the Third Amended and Restated
Stockholders’ Agreement and (ii) in connection with the settlement or delivery of Warrant Shares to an underwriter in a public offering; provided, however, that, in connection with a Transfer pursuant to clause
(i) above, the Warrants shall not be exercisable until the earlier to occur of (x) the permissibility of such exercise under the Foreign Ownership Limitations or (y) the Transfer of such Warrants to any holder who is a “citizen
of the United States,” as that term is defined in 49 U.S.C. Section 40102(a)(15), as in effect on the date in question, or any successor statute or regulation, as interpreted by the DOT in applicable precedent (“United States
Citizen”). In the event that a registered holder who wishes to exercise the Warrants is not a United States Citizen, then such holder shall provide the Company with at least 30 days’ prior written notice of any intended exercise in
order to facilitate the Company’s provision of advance notice to DOT as described in Section 4(a). 
 4. Exercise of
Warrant. 
 (a) DOT Notification. The Company will provide the DOT with 30-day advance written notice prior to the intended
exercise of any of the Warrants by any Person who is not a United States Citizen. 
 (b) Exercise. Subject to the provisions of this
Agreement, upon surrender to the Company at its principal office of a Warrant Certificate with the Election to Purchase substantially in the form attached as Annex II to such Warrant Certificate duly executed, together with payment in accordance
with the last sentence of this Section 4(b) of the applicable Exercise Price then in effect (the date of such surrender, the “Exercise Date”), the Company shall issue and deliver promptly to the registered holder of such
Warrant Certificate, a certificate or certificates for the Warrant Shares or other securities or property to which the registered holder is entitled, registered in the name of such registered holder or, upon the written order of such registered
holder, in such name or names as such registered holder may designate. Any certificate or certificates representing Warrant Shares shall be deemed to have been issued and any person so designated to be named therein shall be deemed to have become
the holder of record of the Warrant Shares as of the date of the surrender of such Warrant Certificate (together with such duly executed Form of Election to Purchase) and payment of the Exercise Price. Payment of the applicable Exercise Price with
respect to an exercise of Warrants pursuant to this 

  
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Section 4(b) shall be made, at the holder’s option, (x) in cash or (y) without the payment of cash, by reducing the number of shares of Class C Common Stock obtainable upon
the exercise of such Warrants (an exercise as provided under this clause (y), a “Cashless Exercise”) so as to yield a number of shares of Class C Common Stock issued upon the exercise of such Warrants equal to the product of
(A) the number of shares of Class C Common Stock that would have been issued if the Warrants being exercised had been exercised upon the full payment of the Exercise Price in cash and (B) a fraction, the numerator of which is the excess of
the current market price per share of Common Stock on the applicable Exercise Date (determined in accordance with Section 7(f)) over the Exercise Price as of such Exercise Date and the denominator of which is the current market price per share
of the Common Stock as of such Exercise Date (determined in accordance with Section 7(f)). 
 (c) Exercise in Whole or in Part.
The purchase rights pursuant to Section 3 evidenced by a Warrant Certificate shall be exercisable, at the election of the registered holder thereof, in whole or in part. If less than all of the Warrant Shares purchasable under any Warrant
Certificate are purchased, the Company shall cancel such Warrant Certificate upon the surrender thereof and shall execute and deliver a new Warrant Certificate of like tenor for the remaining number of Warrant Shares purchasable thereunder. 

(d) Fractional Shares. No fractional shares of Common Stock shall be issued upon exercise of any Warrants. Instead the Company shall
round the results of an exercise down to the nearest full share of Common Stock and pay the warrant holder an amount in cash equal to the amount of the fractional share not issued multiplied by the Exercise Price per share. 

(e) Reservation of Shares. The Company will at all times reserve and keep available out of its authorized Common Stock solely for the
purpose of issuance upon exercise of the Warrants as herein provided, such number of shares of Common Stock as shall from time to time be issuable upon the exercise of all outstanding Warrants. All shares of Common Stock that may be issued upon
exercise of the Warrants must and will be duly authorized and, upon issuance, be validly issued, fully paid and nonassessable and not subject to preemptive rights of any stockholder or other Person and free from all taxes, liens, charges and
security interests with respect to the issuance thereof, other than those taxes, liens, charges and security interests as may be created by the holder of such Warrants or its affiliates. 

5. Restrictions on Transfer. 

(a) Restrictions Under Stockholders Agreement. It is acknowledged that the Warrants (and the Class C Common Stock issuable upon the exercise
thereof) are subject to certain restrictions on transfer as set forth in the Third Amended and Restated Stockholders’ Agreement, and that any transferee of the Warrants shall execute an instrument signifying its agreement to be bound by the
terms and conditions of the Third Amended and Restated Stockholders’ Agreement. 
 (b) Warrant Register. The Company shall
maintain at its principal office a Warrant Register for registration of Warrant Certificates and transfers thereof. The Company shall initially register the outstanding Warrants in the name of the Initial Holder. The Company may deem and treat the
registered holder(s) of the Warrant Certificates as the absolute owner(s) 

  
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thereof and of the Warrants represented thereby (notwithstanding any notation of ownership or other writing on the Warrant Certificates made by any person) for the purpose of any exercise thereof
or any distribution to the holder(s) thereof, and for all other purposes, and the Company shall not be affected by any notice to the contrary. For the purpose of this Agreement, all references to a holder herein shall refer to a registered holder of
Warrants. 
 (c) Warrants and Warrant Shares Not Registered. Each registered holder of the Warrants, by acceptance thereof,
represents and acknowledges that the Warrants and the Warrant Shares which may be purchased upon exercise of a Warrant (x) are not registered under the Securities Act of 1933, as amended (the “Securities Act”) or under any
state securities laws, that the issuance of the Warrants and the offering and sale of such Warrant Shares are being made in reliance on the exemption from registration under Section 4(2) of the Securities Act and from similar exemptions under
state securities laws as not involving any public offering and that the Company’s reliance on such exemption is predicated in part on the representations made by the Initial Holder of the Warrants to and with the Company that such holder
(1) is acquiring the Warrants for investment for its own account, with no present intention of reselling or otherwise distributing the same, (2) is an “accredited investor” as defined in Regulation D under the Securities Act, and
(3) has such knowledge and experience in financial and business matters that it is capable of evaluating the merits and risks of the investments made or to be made in connection with the acquisition and exercise of the Warrants and (y) are
subject to restrictions on transfer under the Third Amended and Restated Stockholders’ Agreement. Neither the Warrants nor the related Warrant Shares may be transferred except (i) in compliance with the terms of the Third Amended and
Restated Stockholders’ Agreement and (ii) (A) pursuant to an effective registration statement under the Securities Act, (B) pursuant to Rule 144 under the Securities Act if the transfer is permitted by Rule 144 and the transferor
delivers a certificate, in form and substance reasonably satisfactory to the Company, that such transfer complies with the requirements of Rule 144, or (C) pursuant to any other available exemption from registration if such transferee makes the
representations set forth in the preceding sentence in writing to the Company and, in the case of any transfer pursuant to clause (B) or (C), accompanied by the delivery to the Company of an opinion of counsel reasonably satisfactory to the
Company by counsel reasonably satisfactory to the Company, stating that no registration is required under the Securities Act. 
 (d)
Warrants and Warrant Shares Not Registered. Each registered holder of the Warrants, by acceptance thereof, agrees that prior to any disposition by such holder of the Warrants or of any Warrant Shares, such holder will give written notice to
the Company expressing such holder’s intention to effect such disposition and describing briefly such holder’s intention as to the manner in which the Warrants or the Warrant Shares theretofore issued or thereafter issuable upon exercise
hereof, are to be disposed of together with the opinion described in Section 5(c), if required, whereupon, but only if such transfer is not restricted pursuant to the Third Amended and Restated Stockholders’ Agreement and is otherwise
permitted pursuant to Section 5(c) above, such transferring holder shall be entitled to dispose of the Warrants and/or the Warrant Shares theretofore issued upon the exercise thereof, all in accordance with the terms of the notice delivered by
such holder to the Company. In the event of such transfer, the Company shall register the transfer of any outstanding Warrants in the Warrant Register upon surrender of the Warrant Certificate(s) evidencing such Warrants to the Company at its
principal office, accompanied by a written instrument of transfer in form 

  
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reasonably satisfactory to it, duly executed by the registered holder thereof. Upon any such registration or transfer, new Warrant Certificate(s) evidencing such transferred Warrants shall be
issued to the transferee(s) and the surrendered Warrant Certificate(s) shall be canceled. 
 6. Listing on Securities Exchanges. If
the Common Stock is listed on a stock exchange or quoted on the Nasdaq National Market, the Company will use its reasonable efforts to procure at its sole expense the listing of all Warrant Shares (subject to issuance or notice of issuance) on all
stock exchanges on which the Common Stock is then listed, or the quotation of the Warrant Shares on the Nasdaq National Market, as the case may be, and maintain the listing or quotation of such shares and other securities after issuance. 

7. Adjustment of the Number of Warrant Shares Issuable. Subject to the limitations set forth herein, the number of Warrant Shares
issuable upon the exercise of each Warrant is subject to adjustment from time to time upon the occurrence following the Fifth Closing Date of the events enumerated in this Section 7. For purposes of this Section 7, “Common Stock”
means shares now or hereafter authorized of any class of common stock of the Company, including but not limited to the Class C Common Stock, and any other stock of the Company, however designated, that has the right (subject to any prior rights of
any class or series of preferred stock) to participate in any distribution of the assets or earnings of the Company without limit as to per share amount, but excluding any shares of any class of common stock of the Company issued or issuable upon
exercise or conversion of equity securities issued prior to the Fifth Closing Date. 
 (a) Adjustment for Change in Capital Stock. If
the Company: 
  

	 	(i)	pays a dividend or makes a distribution on its Common Stock, in either case in shares of its Common Stock; 

  

	 	(ii)	subdivides its outstanding shares of Common Stock into a greater number of shares; 

  

	 	(iii)	combines its outstanding shares of Common Stock into a smaller number of shares; 

  

	 	(iv)	makes a distribution on its Common Stock in shares of its capital stock other than Common Stock; or 

  

	 	(v)	issues by reclassification of its Common Stock any shares of its capital stock, 

 then the number of shares of
Common Stock issuable upon exercise of each Warrant immediately prior to such action shall be proportionately adjusted so that the holder of any Warrant thereafter exercised shall receive the aggregate number and kind of shares of capital stock of
the Company which he would have owned immediately following such action if such Warrant had been exercised immediately prior to such action. 

The adjustment shall become effective immediately after the record date in the case of a dividend or distribution and immediately after the
effective date in the case of a subdivision, combination or reclassification. 

  
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 Such adjustment shall be made successively whenever any event listed above shall occur. 

(b) Adjustment for Rights Issue. 

If the Company distributes any rights, options or warrants to all holders of its Common Stock entitling them to purchase shares of Common
Stock at a price per share less than the current market price per share on the record date for determining holders entitled to the distribution of rights, options or warrants, the number of shares of Common Stock issuable upon exercise of each
Warrant shall be adjusted in accordance with the formula: 
  

									
		  	 N1 =

 
	 	 N  x  
  
	 	 O + A
	  	
	  	 	 	O + (A x P/M)	  	

 where: 
  

					
	N1	 	=	    	the adjusted number of shares of Common Stock issuable upon exercise of each Warrant.
			
	N	 	=	    	the current number of shares of Common Stock issuable upon exercise of each Warrant.
			
	O	 	=	    	the number of shares of Common Stock outstanding on the record date.
			
	A	 	=	    	the number of additional shares of Common Stock offered.
			
	P	 	=	    	the purchase price per share of the additional shares.
			
	M	 	=	    	the current market price per share of Common Stock on the record date.

 The adjustment shall be made successively whenever any such rights, options or warrants are issued and shall
become effective immediately after the record date for the determination of stockholders entitled to receive the rights, options or warrants. If at the end of the period during which such rights, options or warrants are exercisable, not all rights,
options or warrants shall have been exercised, the number of shares of Common Stock issuable upon exercise of each Warrant shall be immediately readjusted to what it would have been if “N” in the above formula had been the number of shares
actually issued at the end of the period. 
 (c) Adjustment for Other Distributions. If the Company distributes to all holders of its
Common Stock any of its assets (excluding cash distributions for which Section 7(p) hereof is applicable) or debt or other securities or any rights, options or warrants to purchase the assets or debt or other securities of the Company, the
number of shares of Common Stock issuable upon exercise of each Warrant shall be adjusted in accordance with the formula: 
  

									
		 	 N’ =
  
	 	 N  x  
  
	  	 M
	  	
	 	 	  	        M - F        	  	

  
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 where: 
  

					
	N’	 	=	    	the adjusted number of shares of Common Stock issuable upon exercise of each Warrant.
			
	N	 	=	    	the current number of shares of Common Stock issuable upon exercise of each Warrant.
			
	M	 	=	    	the current market price per share of Common Stock on the record date mentioned below.
			
	F	 	=	    	the fair market value on the record date of the assets, securities, rights, options or warrants distributable to one share of Common Stock after taking into account, in the case of any rights, options or warrants, the consideration
required to be paid upon exercise thereof. The Board shall reasonably determine the fair market value in good faith and such determination shall be conclusive.

 The adjustment shall be made successively whenever any such distribution is made and shall become effective
immediately after the record date for the determination of stockholders entitled to receive the distribution. This Section 7(c) does not apply to rights, options or warrants referred to in Section 7(b). If any adjustment is made pursuant
to this Section 7(c) as a result of the issuance of rights, options or warrants and at the end of the period during which any such rights, options or warrants are exercisable, not all such rights, options or warrants shall have been exercised,
the Warrant shall be immediately readjusted as if “F” in the above formula was the fair market value described in the definition of “F” on the record date of the assets or securities actually distributed upon exercise of such
rights, options or warrants divided by the number of shares of Common Stock outstanding on the record date. Notwithstanding anything to the contrary contained in this Section 7(c), if “M-F” in the above formula is less than $1.00, the
Company may elect to, and if “M-F” is a negative number, the Company shall, in lieu of the adjustment otherwise required by this Section 7(c), distribute to the holders of the Warrants, upon exercise thereof, the assets, securities,
rights, options or warrants (or the proceeds thereof) which would have been distributed to such holders had such Warrants been exercised immediately prior to the record date for such distribution. 

(d) Adjustment for Common Stock Issue. If the Company issues shares of Common Stock for a consideration per share less than the current
market price per share on the date the Company fixes the offering price of such additional shares, the number of shares of Common Stock issuable upon exercise of each Warrant shall be adjusted in accordance with the formula: 

 

									
		 	 N’ =
  
	 	 N  x  
  
	  	 A
	  	
	 	 	  	        O + P/M        	  	

  
 8 

 where: 
  

					
	N’	 	=	    	the adjusted number of shares of Common Stock issuable upon exercise of each Warrant.
			
	N	 	=	    	the current number of shares of Common Stock issuable upon exercise of each Warrant.
			
	O	 	=	    	the number of shares outstanding immediately prior to the issuance of such additional shares.
			
	P	 	=	    	the aggregate consideration received for the issuance of such additional shares.
			
	M	 	=	    	the current market price per share on the date of issuance of such additional shares.
			
	A	 	=	    	the number of shares of Common Stock outstanding immediately after the issuance of such additional shares.

 The adjustment shall be made successively whenever any such issuance is made, and shall become effective
immediately after such issuance. 
 This Section 7(d) does not apply to: 

 

	 	(i)	any of the transactions described in Sections 7(b) and 7(c), 

  

	 	(ii)	the exercise of Warrants, or the conversion or exchange of other securities convertible or exchangeable for Common Stock, or the issuance of Common Stock upon the exercise of rights, options or warrants issued to the
holders of Common Stock, 

  

	 	(iii)	Common Stock (and options, restricted stock units and other equity incentives exercisable, convertible or exchangeable therefor) issued to the Company’s employees, officers, directors, consultants or advisors
(whether or not still in such capacity on the date of exercise) under bona fide employee benefit plans or equity incentive plans adopted by the Board and approved by the holders of Common Stock when required by law, if such Common Stock would
otherwise be covered by this Section 7(d), and 

  

	 	(iv)	Common Stock issued in a bona fide public offering. 

 (e) Adjustment for Convertible
Securities Issue. If the Company issues any securities convertible into or exchangeable for Common Stock (other than securities issued in transactions described in Sections 7(b) and 7(c)) for a consideration per share of Common Stock initially
deliverable upon conversion or exchange of such securities less than the current market price per share on the date of issuance of such securities, the number of shares of Common Stock issuable upon exercise of each Warrant shall be adjusted in
accordance with this formula: 
  

									
		 	 N’ =
  
	 	 N  x  
  
	  	 O + D
	  	
	 	 	  	        O + P/M        	  	

  
 9 

 where: 
  

					
	N’	 	=	    	the adjusted number of shares of Common Stock issuable upon exercise of each Warrant.
			
	N	 	=	    	the current number of shares of Common Stock issuable upon exercise of each Warrant.
			
	O	 	=	    	the number of shares of Common Stock outstanding immediately prior to the issuance of such securities.
			
	P	 	=	    	the aggregate consideration received for the issuance of such securities.
			
	M	 	=	    	the current market price per share on the date of issuance of such securities.
			
	D	 	=	    	the maximum number of shares of Common Stock deliverable upon conversion or in exchange for such securities at the initial conversion or exchange rate.

 The adjustment shall be made successively whenever any such issuance is made, and shall become effective
immediately after such issuance. 
 If all of the Common Stock deliverable upon conversion or exchange of such securities have not been
issued when such securities are no longer outstanding, then the number of shares of Common Stock issuable upon exercise of each Warrant shall promptly be readjusted to what it would have been had the adjustment upon the issuance of such securities
been made on the basis of the actual number of shares of Common Stock issued upon conversion or exchange of such securities. 
 This
Section 7(e) does not apply to (i) options, restricted stock units and other equity incentives exercisable, convertible or exchangeable for Common Stock that are issued to the Company’s employees, officers, directors, consultants or
advisors (whether or not still in such capacity on the date of exercise) under bona fide employee benefit plans or equity incentive plans adopted by the Board and approved by the holders of Common Stock when required by law or (ii) convertible
securities issued in a bona fide public offering. 
 (f) Current Market Price. In Sections 7(b), (c), (d) and (e) and
Section 10, the current market price per share of Common Stock on any date is the average of the Closing Prices (as defined below) of the Common Stock for 20 consecutive trading days commencing 30 trading days before the date in question. The
term “Closing Price” shall mean, for each trading day, (A) in the case of a security listed or admitted for trading on any United States national securities exchange or quotation system, the last reported sale price regular way, on
such day, or if no sale takes place on such day, the average of the closing bid and asked prices in the over-the-counter market as furnished by any New York Stock Exchange member firm selected from time to time by the Company for that purpose,
(B) in the case of a security not then listed or admitted for trading on any United States national securities exchange or quotation system and as to which no such reported sale price or bid or asked prices are available, the average or the
reported high bid and low asked prices on such day, as reported by a reputable quotation service, or a newspaper of general circulation in the Borough of Manhattan, City and State of New York, 

  
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customarily published on each Business Day, designated by the Company, or if there shall be no bid and asked prices on such day, the average of the high bid and low asked prices, as so reported,
on the most recent day (not more than thirty (30) days prior to the date in question) for which prices have been so reported and (C) if there are not bid and asked prices reported during the thirty (30) days prior to the date in
question, the Closing Price will be the Fair Market Value. “Fair Market Value” means, as to any share of Common Stock, the cash price at which a willing seller would sell and a willing buyer would buy such share of Common Stock in
an arm’s length negotiated transaction without time constraints, as determined by a nationally recognized valuation firm selected by mutual agreement of the Initial Holder and the Company, whose determination shall be final and binding on the
parties hereto; provided, however, that (i) with respect to a sale of securities approved unanimously by the members of the Board of Directors of the Company, the Fair Market Value of such securities shall be the price actually
paid by the purchaser or purchasers of such securities, and (ii) with respect to a sale of securities pursuant to a public offering by the Company, the Fair Market Value of such securities shall be the offering price of such securities. The
fees and expenses of the valuation firm pursuant to the preceding sentence, if applicable, shall be paid by the Company. 
 (g)
Consideration Received. For purposes of any computation respecting consideration received pursuant to Sections 7(b), (d) or (e), the following shall apply: 

(A) in the case of the issuance of shares of Common Stock for cash, the consideration shall be the gross proceeds to the
Company from such issuance, which shall not include any deductions for any commissions, discounts, other expenses incurred by the Company in connection therewith or amounts paid or payable for accrued interest or accrued dividends; 

(B) in the case of the issuance of shares of Common Stock for a consideration in whole or in part other than cash or, subject
to clause (C) below, securities, the consideration other than cash shall be deemed to be the fair market value thereof as determined in good faith by the Board (irrespective of the accounting treatment thereof), whose determination shall be
conclusive; 
 (C) in the case of the issuance of shares of Common Stock for a consideration in whole or in part consisting
of securities, the value of any securities shall be deemed to be: (x) if traded on a securities exchange or through the Nasdaq National Market, the average of the closing prices of the securities on such quotation system over the 30-day period
ending three days preceding the day in question, (y) if actively traded over-the-counter, the average of the closing bid or sale prices (whichever is applicable) over the 30-day period ending three days preceding the day in question and
(z) if there is no active public market, the fair market value thereof, determined as provided in clause (B) above; and 

(D) in the case of the issuance of securities convertible into, exercisable for or exchangeable for shares of Common Stock, the
aggregate consideration received therefor shall be deemed to be the consideration received by the Company for the issuance of such securities plus the additional minimum consideration, if any, to be received by the Company upon the conversion,

  
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exercise or exchange thereof for the maximum number of shares used to calculate the adjustment (the consideration in each case to be determined in the same manner as provided in clauses
(A) through (C) of this Section 7(g). 
 (h) When De Minimis Adjustment May Be Deferred. 

No adjustment in the number of shares of Common Stock issuable upon exercise of each Warrant need be made unless the adjustment would require
an increase or decrease of at least 1% in such number. Any adjustments that are not made shall be carried forward and taken into account in any subsequent adjustment. 

All calculations under this Section 7 shall be made to the nearest cent or to the nearest 1/100th of a share, as the case may be. 

(i) When No Adjustment Required. No adjustment need be made for a transaction referred to in Sections 7(b), (c), (d) or
(e) if the relevant Warrant holders are to participate, without requiring the Warrants to be exercised, in the transaction on a basis and with notice that the Board reasonably determines to be fair and appropriate in light of the basis and
notice on which holders of Common Stock participate in the transaction. A Warrant holder’s having the opportunity to participate in a transaction shall not of itself trigger the applicability of this subsection (i) in the absence of actual
participation (or election to participate) in such transaction by such Warrant holder. 
 To the extent the relevant Warrants become
convertible into cash, no adjustment need be made thereafter as to the amount of cash into which such Warrants are exercisable. Interest will not accrue on the cash. 

(j) Notice of Adjustment. Upon any adjustment of the number of shares or Exercise Price pursuant to Section 7, the Company shall
within five days, mail to registered holders of the applicable Warrants, first class, postage prepaid, a notice of the adjustment together with a certificate from the Company’s independent public accountants briefly stating the facts requiring
the adjustment and the manner of computing it. 
 (k) Notice of Certain Transactions. If: 

 

	 	(i)	the Company takes any action that would require an adjustment in the number of shares of Common Stock issuable upon exercise of a Warrant or Exercise Price pursuant to Sections 7(a), (b), (c), (d) or (e) and
if the Company does not arrange for the applicable Warrant holders to participate pursuant to Section 7(i); 

  

	 	(ii)	the Company takes any action that would require a supplemental Fifth Closing Warrant Agreement pursuant to Section 7(l); or 

  

	 	(iii)	there is a liquidation or dissolution of the Company, 

 the Company shall mail to registered holders of the
applicable Warrants, first class, postage prepaid, a notice stating the proposed record date for a dividend or distribution or the proposed 

  
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effective date of a subdivision, combination, reclassification, consolidation, merger, transfer, lease, liquidation or dissolution. The Company shall mail the notice at least 15 days before such
date. Failure to mail the notice or any defect in it shall not affect the validity of the transaction. 
 (l) Reorganization of
Company. If the Company consolidates or merges with or into, or transfers or leases all or substantially all its assets to, any person, upon consummation of such transaction the Warrants shall automatically become exercisable for the kind and
amount of securities, cash or other assets which the holder of a Warrant would have owned immediately after the consolidation, merger, transfer or lease if such holder had exercised the Warrant immediately before the effective date of the
transaction; provided that if the holders of Common Stock were entitled to exercise a right of election as to the kind or amount of securities, cash or other assets receivable upon such consolidation or merger, then the holders of the Warrants
shall, following exercise of the Warrants in accordance with Section 4 hereof, be entitled to exercise such right of election. Concurrently with the consummation of any such transaction, the corporation or other entity formed by or surviving
any such consolidation or merger if other than the Company, or the person to which such sale or conveyance shall have been made, shall enter into a supplemental Fifth Closing Warrant Agreement so providing and further providing for adjustments which
shall be as nearly equivalent as may be practical to the adjustments provided for in this Section. The successor Company shall mail to Warrant holders a notice describing the supplemental Fifth Closing Warrant Agreement. 

If the issuer of securities deliverable upon exercise of Warrants under the supplemental Fifth Closing Warrant Agreement is an affiliate of
the formed, surviving, transferee or lessee corporation, that issuer shall join in the supplemental Fifth Closing Warrant Agreement. 
 If
this Section 7(l) applies, Sections 7(a), (b), (c), (d) and (e) do not apply. 
 (m) When Issuance or Payment May Be
Deferred. In any case in which this Section 7 shall require that an adjustment in the number of shares of Common Stock issuable upon exercise of a Warrant be made effective as of a record date for a specified event, the Company may elect to
defer until the occurrence of such event issuing to the holder of any applicable Warrant exercised after such record date the Warrant Shares and other capital stock of the Company, if any, issuable upon such exercise over and above the Warrant
Shares and other capital stock of the Company, if any, issuable upon such exercise on the basis of the number of shares of Common Stock issuable upon exercise of the Warrant; provided, however, that the Company shall deliver to such holder a due
bill or other appropriate instrument evidencing such holder’s right to receive such additional Warrant Shares, other capital stock and cash upon the occurrence of the event requiring such adjustment. 

(n) Adjustment in Exercise Price. 

Upon each event that provides for an adjustment of the number of shares of Common Stock issuable upon exercise of a Warrant pursuant to this
Section 7, each applicable Warrant outstanding prior to the making of the adjustment shall thereafter have an adjusted applicable Exercise Price (calculated to the nearest ten millionth) obtained from the following formula: 

 

									
		 	E1 =	 	E  x  	 	   N  
	  	
	 	 	 	N1	  	

  
 13 

 where: 

 

					
	E1	 	=	    	the adjusted Exercise Price.
			
	E	 	=	    	the Exercise Price prior to adjustment.
			
	N1	 	=	    	the adjusted number of Warrant Shares issuable upon exercise of an applicable Warrant by payment of the adjusted Exercise Price.
			
	N	 	=	    	the number of Warrant Shares previously issuable upon exercise of an applicable Warrant by payment of the Exercise Price prior to adjustment.

 Following any adjustment to the applicable Exercise Price pursuant to this Section 7, the amount
payable, when adjusted and together with any consideration allocated to the issuance of the applicable Warrants, shall never be less than the par value per Warrant Share at the time of such adjustment. Such adjustment shall be made successively
whenever any event listed above shall occur. The Company hereby agrees with each holder of Warrants that it shall not increase the par value of the Common Stock above its current par value of $.01 per share. 

(o) Form of Warrants. Irrespective of any adjustment in the number or kind of shares issuable upon the exercise of the Warrants or the
payment of the applicable Exercise Price, Warrant Certificates theretofore or thereafter issued may continue to state the same number and kind of shares and the same applicable Exercise Price as are stated in the Warrant Certificates initially
issuable pursuant to this Agreement without affecting the number and kind of such shares issuable upon the exercise of the Warrants or payment of the applicable Exercise Price. 

(p) Cash Distributions. If the Company distributes cash as a dividend or other distribution to all holders of its Common Stock no
adjustment shall be made to the number of shares of Common Stock issuable upon the exercise of each Warrant pursuant to this Section 7. 

(q) Limitations on Adjustments Upon Registration. Notwithstanding anything to the contrary in this Section 7, the adjustments
described in Section 7(b), 7(c), 7(d) and 7(e) hereof shall not be applicable, and shall have no effect, with respect to any Warrants that have been registered in connection with a Demand Registration pursuant to Section 10 of the Third
Amended and Restated Stockholders’ Agreement or a Piggyback Registration pursuant to Section 11 of the Third Amended and Restated Stockholders’ Agreement. 

8. Exchange and Replacement of Warrant Certificates. Each Warrant Certificate is exchangeable without expense, upon the surrender
thereof by the registered holder thereof at the principal executive office of the Company, for a new Warrant Certificate of like tenor and date representing in the aggregate the right to purchase the same number of Warrant Shares in such
denominations as shall be designated by the registered holder thereof at the time of such surrender. Upon receipt by the Company of evidence reasonably satisfactory to it of the loss, theft, destruction or mutilation of any Warrant Certificate, and,
in case of loss, theft or 

  
 14 

 
destruction, of indemnity reasonably satisfactory to it, and reimbursement to the Company of all reasonable expenses incidental thereto, and upon surrender and cancellation of such Warrant
Certificate, if mutilated, the Company will make and deliver a new Warrant Certificate of like tenor, in lieu thereof. 
 9. Payment of
Taxes. The Company will pay all documentary stamp taxes attributable to the initial issuance of the Warrants and of the Warrant Shares upon the exercise of Warrants; provided, however, that the Company shall not be required to pay any tax or
taxes which may be payable in respect of any transfer involved in the issuance of any Warrant Certificates or any certificates for Warrant Shares in a name other than that of the registered holder of such Warrant Certificate, and the Company shall
not be required to issue or deliver such Warrant Certificates unless or until the person or persons requesting the issuance thereof shall have paid to the Company the amount of such tax or shall have established to the reasonable satisfaction of the
Company that such tax has been paid. 
 10. Issuance of Additional Warrants. If the Company issues (i) shares of Common Stock
for a consideration per share less than the current Fair Market Value per share of the Company’s Common Stock on the date the Company fixes the offering price of such additional shares, (ii) any securities convertible into or exchangeable
for Common Stock (other than securities issued in transactions described in Sections 7(a) and 7(c)) for a consideration per share of Common Stock initially deliverable upon conversion or exchange of such securities less than the current Fair Market
Value per share on the date of issuance of such securities, or (iii) otherwise distributes any rights, options or warrants to all holders of its Common Stock entitling them to purchase shares of Common Stock at a price per share less than the
current Fair Market Value per share on the record date for determining holders entitled to the distribution of rights, options or warrants, each holder of Warrants shall be entitled to purchase from the Company, and the Company shall sell to such
holder, additional warrants to purchase the number of shares (the “Additional Warrant Shares”) of Class C Common Stock (the “Additional Class C Warrants”) that such holder would have been entitled to purchase if
such holder had exercised its preemptive rights in full under Section 19 of the Third Amended and Restated Stockholders’ Agreement with respect to the number of shares of Common Stock underlying the Warrants. The price paid by each holder
of Warrants for the Additional Warrants shall equal the product of (x) $0.01 and (y) the number of Additional Warrant Shares underlying such Additional Class C Warrants, and the exercise price per share shall equal the offering price,
exercise price or consideration per share of Common Stock, as applicable, issued or issuable (upon conversion or exercise, as applicable) by the Company. This Section 10 shall not be applicable, and shall have no effect, with respect to any
Warrants that have been registered in connection with a Demand Registration pursuant to Section 10 of the Third Amended and Restated Stockholders’ Agreement or a Piggyback Registration pursuant to Section 11 of the Third Amended and
Restated Stockholders’ Agreement. 
 11. Legends. (a) This Warrant and the Warrant Shares issuable upon exercise hereof are
subject in all respects to the terms and conditions of the Third Amended and Restated Stockholders’ Agreement. No transfer, sale, assignment, hypothecation or other disposition of this Warrant or the Warrant Shares issuable upon exercise hereof
may be made except in accordance with the provisions of the Third Amended and Restated Stockholders’ Agreement. The holder of the Warrant, by acceptance of this Warrant, agrees to be bound by the applicable provisions of the Third Amended and
Restated Stockholders’ Agreement and all applicable benefits of the Third Amended and Restated Stockholders’ Agreement shall inure to such holder. 

  
 15 

 (b) Except as otherwise provided in this Section 11, each Warrant Certificate and
certificate for Warrant Shares initially issued upon the exercise of this Warrant, and each Warrant Certificate and certificate for Warrants or Warrant Shares issued to any transferee of any such certificates, shall be stamped or otherwise imprinted
with a legend in substantially the following form: 
 “THE SECURITIES REPRESENTED BY THIS CERTIFICATE AND THE WARRANT SHARES ISSUABLE
UPON EXERCISE HEREOF MAY NOT BE TRANSFERRED, SOLD, ASSIGNED, PLEDGED, HYPOTHECATED OR OTHERWISE DISPOSED OF UNLESS SUCH TRANSFER, SALE, ASSIGNMENT, PLEDGE, HYPOTHECATION OR OTHER DISPOSITION COMPLIES WITH THE PROVISIONS OF THE THIRD AMENDED AND
RESTATED STOCKHOLDERS’ AGREEMENT, DATED AS OF JANAURY 12, 2010 (THE “STOCKHOLDERS’ AGREEMENT”), AS MAY BE AMENDED, RESTATED OR SUPERSEDED FROM TIME TO TIME, AMONG VIRGIN AMERICA INC. (THE “COMPANY”),
CAROLA HOLDINGS LIMITED, VAI PARTNERS LLC AND THE OTHER PARTIES NAMED THEREIN, A COPY OF WHICH IS ON FILE AT THE REGISTERED OFFICE OF THE COMPANY. THE HOLDER OF THIS CERTIFICATE AND THE WARRANTS SHARES ISSUABLE UPON EXERCISE HEREOF AGREES TO BE
BOUND BY THE TERMS OF THE STOCKHOLDERS’ AGREEMENT. 
 IN ADDITION, THE SECURITIES REPRESENTED BY THIS CERTIFICATE AND THE WARRANT SHARES
ISSUABLE UPON EXERCISE HEREOF HAVE NOT BEEN REGISTERED UNDER UNITED STATES SECURITIES LAWS AND MAY NOT BE TRANSFERRED TO ANY PERSON UNLESS SUCH SECURITIES ARE REGISTERED OR TRANSFERRED IN ACCORDANCE WITH AN EXEMPTION FROM REGISTRATION IN THE UNITED
STATES. 
 THE SECURITIES EVIDENCED BY THIS CERTIFICATE AND THE WARRANT SHARES ISSUABLE UPON EXERCISE HEREOF ARE SUBJECT TO RESTRICTIONS ON
VOTING PROVIDED FOR IN THE STOCKHOLDERS’ AGREEMENT AND NO VOTE OF SUCH SECURITIES THAT CONTRAVENES SUCH STOCKHOLDERS’ AGREEMENT SHALL BE EFFECTIVE. 

THE TRANSFER OF THE WARRANTS REPRESENTED BY THIS CERTIFICATE AND THE WARRANT SHARES ISSUABLE UPON EXERCISE HEREOF IS RESTRICTED IN ACCORDANCE
WITH THE FIFTH CLOSING WARRANT AGREEMENT REFERRED TO HEREIN.” 

  
 16 

 (c) Notwithstanding the provisions of Section 11(b), (i) the Company shall deliver
certificates for Warrants or Warrant Shares without the second paragraph of the legend set forth in such paragraph if the securities referred to in such paragraph shall have been registered under the Securities Act or if such legend is otherwise not
required under the Securities Act, and if such legend has been set forth on any previously delivered certificates, such legend shall be removed from any certificates at the request of the holder if the securities referred to in such clause have been
registered under the Securities Act, or upon delivery of a legal opinion by such holder from counsel reasonably satisfactory to the Company that such legend is not otherwise required under the Securities Act, and (ii) the Company shall deliver
certificates for Warrants or Warrant Shares without the first and third paragraphs of the legend set forth in such clause if such legend is no longer required pursuant to the terms of the Third Amended and Restated Stockholders’ Agreement. 

12. Notices. All notices, requests, consents and other communications hereunder shall be in writing and shall be deemed to have been
duly made when delivered by hand or sent by facsimile transmission (with receipt confirmed), or, if timely delivered to an air courier guaranteeing overnight delivery service, on the next business day, or five business days after being deposited in
the mail, first class, certified or registered, postage prepaid, return receipt requested, in each case addressed as follows (or to such other place or places as either of the parties shall designate by written notice to the other): 

 

	 	(i)	if to registered holder, to the address set forth on the Warrant Register maintained by the Company; and 

  

	 	(ii)	if to the Company, to: 

 Virgin America Inc. 

555 Airport Blvd., 
 Suite 200

 Burlingame, CA 94010 

Attention: General Counsel 

Telecopier: (###) ###-#### 
 13.
Amendment. The Company with the consent of the registered holders of at least a majority of the then-outstanding and unexercised Warrants may amend or supplement this Agreement or waive compliance by the Company in a particular instance with
any provision of this Agreement; provided that without the consent of each registered holder affected, no such amendment shall (a) with respect to Warrants held by a non-consenting registered holder, increase the applicable Exercise
Price, or decrease the number of Warrant Shares issuable upon exercise of any Warrant (other than pursuant to adjustments otherwise provided for in this Agreement, including the adjustments provided for in Section 7 hereof), (b) alter the
Company’s obligation to issue Warrant Shares upon exercise of the underlying Warrant (other than pursuant to adjustments otherwise provided for in this Agreement, including the adjustments provided for in Section 7 hereof),
(c) shorten the expiration date of the Warrants, (d) waive the application of the adjustment provisions contained in Section 7 in connection with any events to which such provisions apply or otherwise modify the adjustment provisions
contained in Section 7 in a manner that would have an adverse economic impact on the holders, or (e) otherwise be effective 

  
 17 

 
against such holder unless such amendment, modification or waiver does not treat such holder differently in any respect from any other holder. The Company shall not amend, modify or change any
provision of its articles or certificate of incorporation or bylaws to the extent that such amendment, modification or change would result in the Company being unable to perform or comply with its obligations hereunder. 

14. Successors. Except as otherwise provided herein, all the covenants and provisions of this Agreement by or for the benefit of the
Company and the registered holders of the Warrants shall inure to the benefit of their respective successors and assigns hereunder. 
 15.
Governing Law. This Agreement and each Warrant Certificate issued hereunder shall be deemed to be a contract made under the laws of the State of New York and for all purposes shall be construed in accordance with the laws of such State. 

16. Benefits of This Agreement. Nothing in this Agreement shall be construed to give to any person other than the Company and the
registered holders of the unexercised Warrant Certificates any legal or equitable right, remedy or claim under this Agreement, and this Agreement shall be for the sole and exclusive benefit of the Company and such registered holders. 

17. Counterparts. This Agreement may be executed in any number of counterparts and each of such counterparts shall for all purposes be
deemed to be an original, and such counterparts shall together constitute one and the same instrument. 
 18. Headings. The headings
in this Agreement are intended solely for convenience of reference and shall be given no effect in the construction or interpretation of this Agreement. 

19. Remedies. The Company and the holder hereof each stipulates that the remedies at law of each party hereto in the event of any
default or threatened default by the other party in the performance or compliance with any of the terms of this Warrant Agreement are not and will not be adequate and that, to the fullest extent permitted by law, such terms may be specifically
enforced by a decree for the specific performance of any agreement contained herein or by an injunction against a violation of any of the terms hereof or otherwise. 

20. Severability. The provisions of this Agreement are severable, and if any clause or provision shall be held invalid, illegal or
unenforceable in whole or in part in any jurisdiction, then such invalidity or unenforceability shall affect in that jurisdiction only such clause or provision, or part thereof, and shall not in any manner affect such clause or provision in any
other jurisdiction or any other clause or provision of this Agreement in any jurisdiction. 
 21. Effective Date. This Agreement
shall become effective immediately upon the Fifth Closing. 
 [Signature Page Follows] 

  
 18 

 IN WITNESS WHEREOF, the parties hereto have caused this Fifth Closing Warrant Agreement to be
duly executed as of the day and year first above written. 
  

					
	VIRGIN AMERICA INC.
		
	By:	 	 /s/ Holly Nelson

		 	Name:	 	Holly Nelson
		 	Title:	 	SVP & Chief Financial Officer

 IN WITNESS WHEREOF, the parties hereto have caused this Fifth Closing Warrant Agreement to be
duly executed as of the day and year first above written. 
  

					
	CAROLA HOLDINGS LIMITED
		
	By:	 	 /s/ Henry Kierulf

		 	Name:	 	Henry Kierulf
		 	Title:	 	Alternate Director to Paul Fauvel
		
		 	Address:
		 	Carolina Holdings Limited
		 	c/o La Mottle Chambers
		 	St. Helier
		 	Jersey, JEI 1BJ
		 	Channel Islands
		 	Attn: Paul Fauvel/Ian Cuming
		 	Fax: +##-####-######

 Exhibit A 

THE SECURITIES REPRESENTED BY THIS CERTIFICATE AND THE WARRANT SHARES ISSUABLE UPON EXERCISE HEREOF MAY NOT BE TRANSFERRED, SOLD, ASSIGNED,
PLEDGED, HYPOTHECATED OR OTHERWISE DISPOSED OF UNLESS SUCH TRANSFER, SALE, ASSIGNMENT, PLEDGE, HYPOTHECATION OR OTHER DISPOSITION COMPLIES WITH THE PROVISIONS OF THE THIRD AMENDED AND RESTATED STOCKHOLDERS’ AGREEMENT, DATED AS OF
JANUARY 12, 2010 (THE “STOCKHOLDERS’ AGREEMENT”), AS MAY BE AMENDED, RESTATED OR SUPERSEDED FROM TIME TO TIME, AMONG VIRGIN AMERICA INC. (THE “COMPANY”), CAROLA HOLDINGS LIMITED, VAI PARTNERS LLC AND THE
OTHER PARTIES NAMED THEREIN, A COPY OF WHICH IS ON FILE AT THE REGISTERED OFFICE OF THE COMPANY. THE HOLDER OF THIS CERTIFICATE AND THE WARRANTS SHARES ISSUABLE UPON EXERCISE HEREOF AGREES TO BE BOUND BY THE TERMS OF THE STOCKHOLDERS’
AGREEMENT. 
 IN ADDITION, THE SECURITIES REPRESENTED BY THIS CERTIFICATE AND THE WARRANT SHARES ISSUABLE UPON EXERCISE HEREOF HAVE NOT BEEN
REGISTERED UNDER UNITED STATES SECURITIES LAWS AND MAY NOT BE TRANSFERRED TO ANY PERSON UNLESS SUCH SECURITIES ARE REGISTERED OR TRANSFERRED IN ACCORDANCE WITH AN EXEMPTION FROM REGISTRATION IN THE UNITED STATES. 

THE SECURITIES EVIDENCED BY THIS CERTIFICATE AND THE WARRANT SHARES ISSUABLE UPON EXERCISE HEREOF ARE SUBJECT TO RESTRICTIONS ON VOTING
PROVIDED FOR IN THE STOCKHOLDERS’ AGREEMENT AND NO VOTE OF SUCH SECURITIES THAT CONTRAVENES SUCH STOCKHOLDERS’ AGREEMENT SHALL BE EFFECTIVE. 

THE TRANSFER OF THE WARRANTS REPRESENTED BY THIS CERTIFICATE AND THE WARRANT SHARES ISSUABLE UPON EXERCISE HEREOF IS RESTRICTED IN ACCORDANCE
WITH THE FIFTH CLOSING WARRANT AGREEMENT REFERRED TO HEREIN. 
 No. W-     

CLASS C-5 WARRANT CERTIFICATE 

This Warrant Certificate certifies that, for value received, Carola Holdings Limited, having an address at St. Helier, Jersey, JE1 1BJ,
Channel Islands (“Holder”), is the registered holder of warrants (the “Warrants”) to purchase, after the date hereof until 5:00 P.M, New York time on January     , 2040, up to 60,000,000
fully-paid and non-assessable shares (subject to 

  
 1 

 
adjustment in certain events as provided in Section 7 of the Fifth Closing Warrant Agreement dated as of January 12, 2010 between the Company and Holder (the “Fifth Closing
Warrant Agreement”)) of Class C common stock, $0.01 par value (“Class C Common Stock”), of VIRGIN AMERICA INC., a Delaware corporation (the “Company”), at the exercise price of $5.00 per share, subject to
adjustment as provided in Section 7 of the Fifth Closing Warrant Agreement (the “Exercise Price”), upon surrender of this Warrant Certificate, together with the attached Form of Election to Purchase duly executed, and payment
of the Exercise Price at the principal office of the Company, subject to the terms and conditions set forth herein and in the Fifth Closing Warrant Agreement. Upon exercise of the Warrants, payment of the applicable Exercise Price shall be made, at
the holder’s option, in cash or pursuant to a Cashless Exercise (as defined in the Fifth Closing Warrant Agreement). 
 The Warrants
evidenced by this Warrant Certificate may only be exercised at such times and in such amounts as are provided for in the Fifth Closing Warrant Agreement. 

The Warrants evidenced by this Warrant Certificate are issued pursuant to the Fifth Closing Warrant Agreement, which Fifth Closing Warrant
Agreement is hereby incorporated by reference in and made a part of this instrument and is hereby referred to for a description of the rights, limitation of rights, obligations, duties and immunities thereunder of the Company and the holders
(the words “holders” or “holder” meaning the registered holders or registered holder) of the Warrants. A copy of the Fifth Closing Warrant Agreement may be obtained by the holder(s) hereof upon written request directed to the
Company. 
 The Fifth Closing Warrant Agreement provides that upon the occurrence of certain events, the type and/or number of the
Company’s securities issuable upon exercise of the Warrants, and the Exercise Price, may, subject to certain conditions, be adjusted. 

Upon due presentment for registration of transfer of this Warrant Certificate at the principal office of the Company, a new Warrant
Certificate or Warrant Certificates of like tenor and evidencing in the aggregate a like number of Warrants shall be issued to the transferee(s) in exchange for this Warrant Certificate, subject to the limitations provided herein and in the Fifth
Closing Warrant Agreement, without any charge except for any tax or other governmental charge imposed in connection therewith which is not payable by the Company pursuant to Section 9 of the Fifth Closing Warrant Agreement. 

Upon the exercise of less than all of the Warrants evidenced by this Certificate, the Company shall forthwith issue to the holder hereof a new
Warrant Certificate representing such numbered of unexercised Warrants. 
 The Company may deem and treat the registered holder(s) hereof as
the absolute owner(s) of this Warrant Certificate (notwithstanding any notation of ownership or other writing hereon made by anyone), for the purpose of any exercise hereof and of any distribution to the holder(s) hereof and for all other purposes,
and the Company shall not be affected by any notice to the contrary. 

  
 2 

 All terms used in this Warrant Certificate which are not defined herein and are defined in the
Fifth Closing Warrant Agreement shall have the meanings assigned to them in the Fifth Closing Warrant Agreement. 

  
 3 

 IN WITNESS WHEREOF, the Company has caused this Warrant Certificate to be duly executed under its
corporate seal. 
 Dated: January     , 2010 

 

			
	VIRGIN AMERICA INC.
		
	By:	 	  

		
	Name:	 	  

		
	Title:	 	  

 [Signature page to Carola Holdings Limited Class C-5 Warrant] 

  
 4 

 ANNEX I 

FORM OF ASSIGNMENT 
 (To be
executed by the registered holder if such holder 
 desires to transfer the Warrant Certificate.) 

FOR VALUE RECEIVED,
                                         hereby
sells, assigns and transfers unto
                                        , whose
address is
                                        , this
Warrant Certificate, together with all right, title and interest therein, and does hereby irrevocably constitute and appoint
                                         attorney
to transfer the within Warrant Certificate on the books of the within-named Company, with full power of substitution. 
  

							
	Dated:	 		 	Signature:	 	  

				
		 		 		 	(Signature must conform in all respects to name of holder as specified on the face of the Warrant Certificate. If the Common Stock of the Company is listed on or quoted on an exchange or quotation system, signature must be
guaranteed by a bank or trust company having an office or correspondent in the United States or a broker or dealer which is a member of a registered securities exchange or the National Association of Securities Dealers, Inc.)
				
		 		 		 	  

		 		 		 	(Insert Social Security or Other Identifying Number of Holder)

  
 5 

 ANNEX II 

FORM OF ELECTION TO PURCHASE 

The undersigned hereby irrevocably elects to exercise the right, represented by this Warrant Certificate, to purchase
                 shares of Class C Common Stock at the applicable Exercise Price. The holder herewith makes payment of the Exercise Price by applying
$        , in cash,][by reducing the number of shares of Class C Common Stock obtainable upon exercise of the Warrants (which number, if the Exercise Price were paid in cash, is noted in the preceding
sentence) pursuant to a Cashless Exercise in accordance with the terms of the Fifth Closing Warrant Agreement. 
 The undersigned requests
that a certificate for such shares of Common Stock be registered in the name of
                                        , whose
address is
                                         and that
such certificate be delivered to
                                         whose
address is
                                        . 

 

							
	Dated:	 		 	Signature:	 	  

				
		 		 		 	(Signature must conform in all respects to name of holder as specified on the face of the Warrant Certificate. If the Common Stock of the Company is listed on or quoted on an exchange or quotation system, signature must be
guaranteed by a bank or trust company having an office or correspondent in the United States or a broker or dealer which is a member of a registered securities exchange or the National Association of Securities Dealers, Inc.)
				
		 		 		 	  

		 		 		 	(Insert Social Security or Other Identifying Number of Holder

  
 6EX-10.41

 Exhibit 10.41 
  

 
 FIFTH CLOSING INVESTOR LLC-MBO LLC
WARRANT AGREEMENT 
 Dated as of January 12, 2010 

among 
 VIRGIN AMERICA INC.,

 CYRUS AVIATION INVESTOR, LLC 

and 
 VAI MBO INVESTORS,
LLC 
  
  

 This FIFTH CLOSING INVESTOR LLC-MBO LLC WARRANT AGREEMENT (this “Agreement”),
dated as of January 12, 2010, is by and among Virgin America Inc., a Delaware corporation (the “Company”), Cyrus Aviation Investor, LLC, a Delaware limited liability company (“Investor LLC”), VAI MBO Investors,
LLC, a Delaware limited liability company (“MBO LLC” and, with Investor LLC, the “Initial Holders”). Capitalized terms used herein but not defined herein have the meanings ascribed to such terms in the Third Amended
and Restated Stockholders’ Agreement, dated as of January 12, 2010, among the Company, the Initial Holders, VAI Partners LLC, a Delaware limited liability company (the “Investor”) and the other parties named therein, as
may be amended, restated or superseded from time to time (the “Third Amended and Restated Stockholders’ Agreement”). 

WHEREAS, the Company wishes to facilitate an agreement among Carola Holdings Limited, a limited liability company organized under the laws of
the British Virgin Islands (“Carola”), VAI Management LLC, a Delaware limited liability company (“VAI”) and its U.S. citizen individual and institutional investors, including the Initial Holders, such that it may
obtain additional capital and continue to exercise the rights, privileges, and obligations of its certificate of public convenience and necessity issued by the Department of Transportation; 

WHEREAS, as provided in Section 1.1(i) of the Purchase and Restructuring Agreement, the Initial Holders will pay the Company an
aggregate of $60,000 in cash; 
 WHEREAS, pursuant to the Purchase and Restructuring Agreement, the Company wishes to issue to Investor LLC,
and Investor LLC wishes to purchase from the Company, a warrant to purchase 6,666,667 shares of non-voting, Class C Common Stock at a strike price of $10.00 per share (the “Fifth Closing C-7A Warrant”); 

WHEREAS, pursuant to the Purchase and Restructuring Agreement, the Company wishes to issue to MBO LLC, and MBO LLC wishes to purchase from the
Company, a warrant to purchase 3,333,333 shares of non-voting, Class C Common Stock at a strike price of $10.00 per share (the “Fifth Closing C-7B Warrant”); 

WHEREAS, pursuant to the Purchase and Restructuring Agreement, the Company wishes to issue to Investor LLC, and Investor LLC wishes to
purchase from the Company, a warrant to purchase 20,000,000 shares of non-voting, Class C Common Stock at a strike price of $15.00 per share (the “Fifth Closing C-8 Warrant”); and 

WHEREAS, pursuant to the Purchase and Restructuring Agreement, the Company wishes to issue to Investor LLC, and Investor LLC wishes to
purchase from the Company, a warrant to purchase 30,000,000 shares of non-voting, Class C Common Stock at a strike price of $20.00 per share (the “Fifth Closing C-9 Warrant” and, with the Fifth Closing C-7A Warrant, the Fifth
Closing C-7B Warrant and the Fifth Closing C-8 Warrant, the “Warrants”). 

  
 2 

 NOW, THEREFORE, for good and valuable consideration, the receipt and sufficiency of which is
hereby acknowledged, the parties hereto hereby agree as follows: 
 1. Grant. 

(a) The Company shall grant on the Fifth Closing Date to Investor LLC the Fifth Closing C-7A Warrant, which shall entitle the registered
holder thereof, subject to Section 3 and Section 5 below, to purchase from the Company up to an aggregate of 6,666,667 fully-paid and non-assessable shares (subject to adjustment as provided in Section 7) of non-voting Class C Common
Stock, par value $0.01 per share (the “Class C Common Stock”, and the shares of Class C Common Stock issuable pursuant to the Fifth Closing C-7A Warrant, the “Fifth Closing C-7A Warrant Shares”), at the exercise
price of $10.00 per share (the “Fifth Closing C-7A Warrant Exercise Price”), subject to adjustment as provided in Section 7. Pursuant to Section 4(b) below, upon exercise of the Fifth Closing C-7A Warrant, payment of the
Fifth Closing C-7A Warrant Exercise Price shall be made, at the holder’s option, in cash or pursuant to a Cashless Exercise (as defined below). 

(b) The Company shall grant on the Fifth Closing Date to MBO LLC the Fifth Closing C-7B Warrant, which shall entitle the registered holder
thereof, subject to Section 3 and Section 5 below, to purchase from the Company up to an aggregate of 3,333,333 fully-paid and non-assessable shares (subject to adjustment as provided in Section 7) of non-voting Class C Common Stock
(the “Fifth Closing C-7B Warrant Shares”), at the exercise price of $10.00 per share (the “Fifth Closing C-7B Warrant Exercise Price”), subject to adjustment as provided in Section 7. Pursuant to
Section 4(b) below, upon exercise of the Fifth Closing C-7B Warrant, payment of the Fifth Closing C-7B Warrant Exercise Price shall be made, at the holder’s option, in cash or pursuant to a Cashless Exercise (as defined below). 

(c) The Company shall grant on the Fifth Closing Date to Investor LLC the Fifth Closing C-8 Warrant, which shall entitle the registered holder
thereof, subject to Section 3 and Section 5 below, to purchase from the Company up to an aggregate of 20,000,000 fully-paid and non-assessable shares (subject to adjustment as provided in Section 7) of non-voting Class C Common Stock
(the “Fifth Closing C-8 Warrant Shares”), at the exercise price of $15.00 per share (the “Fifth Closing C-8 Warrant Exercise Price”), subject to adjustment as provided in Section 7. Pursuant to
Section 4(b) below, upon exercise of the Fifth Closing C-8 Warrant, payment of the Fifth Closing C-8 Warrant Exercise Price shall be made, at the holder’s option, in cash or pursuant to a Cashless Exercise (as defined below). 

(d) The Company shall grant on the Fifth Closing Date to Investor LLC the Fifth Closing C-9 Warrant, which shall entitle the registered holder
thereof, subject to Section 3 and Section 5 below, to purchase from the Company up to 30,000,000 fully-paid and non-assessable shares (subject to adjustment as provided in Section 7) of non-voting Class C Common Stock (the
“Fifth Closing C-9 Warrant Shares” and, with the Fifth Closing C-7A Warrant Shares, the Fifth Closing C-7B Warrant Shares and the Fifth Closing C-8 Warrant Shares, collectively the “Warrant Shares”), at the exercise
price of $20.00 per share (the “Fifth Closing C-9 Warrant Exercise Price” and, with the Fifth Closing C-7A Warrant Exercise Price, the Fifth Closing C-7B Warrant Exercise Price and the Fifth Closing C-8 Warrant Exercise Price,
collectively, the “Exercise Price”), subject to adjustment as provided in Section 7. Pursuant to Section 4(b) below, upon exercise of the Fifth Closing C-9 Warrant, payment of the Fifth Closing C-9 Warrant Exercise Price
shall be made, at the holder’s option, in cash or pursuant to a Cashless Exercise (as defined below). 

  
 3 

 (e) Prior to the exercise of the Warrants, no holder of a Warrant Certificate, as such, shall be
entitled to any rights of a stockholder of the Company, including, without limitation, the right to receive dividends or subscription rights, the right to vote, to consent, to exercise any preemptive right, to receive any notice of meetings of
stockholders for the election of directors of the Company or any other matter or to receive any notice of any proceedings of the Company, except as may be specifically provided for herein. The holders of the Warrants are not entitled to share in the
assets of the Company in the event of the liquidation, dissolution or winding up of the Company’s affairs. 
 2. Warrant
Certificates. The Warrants shall be evidenced by certificates issued pursuant to this Agreement (the “Warrant Certificates”) in the form set forth in Exhibit A hereto, with such appropriate insertions, omissions,
substitutions, and other variations as are required or permitted by this Agreement. 
 3. Exercise Period. The Warrants shall be
exercisable if and only if prior to the 30th anniversary of the Fifth Closing Date (a) the closing of a Liquidity Event (as defined in the Third Amended and Restated Stockholders’
Agreement, excluding, for purposes of this Agreement, clause (i) of such definition in the Third Amended and Restated Stockholders’ Agreement) occurs and (b) the offering price per share of Class A Common Stock (in the case of a
Liquidity Event that is a Qualified Public Offering, as defined in the Third Amended and Restated Stockholders’ Agreement) or aggregate consideration per share payable in respect of the Class C Common Stock (in the case of any other Liquidity
Event, excluding, for purposes of this Agreement, clause (i) of such definition in the Third Amended and Restated Stockholders’ Agreement) exceeds (i) $10.00 per share, with respect to the Fifth Closing C-7A Warrant and the Fifth
Closing C-7B Warrant, (ii) $15.00 per share, with respect to the Fifth Closing C-8 Warrant, and (iii) $20.00 per share, with respect to the Fifth Closing C-9 Warrant; provided, that the Initial Holders shall be entitled to exercise
the Warrants prior to the occurrence of such a Liquidity Event (excluding, for purposes of this Agreement, clause (i) of such definition in the Third Amended and Restated Stockholders’ Agreement), with the issuance of Warrant Shares and
the payment of the applicable Exercise Price pursuant to such Warrants to be contingent and effective upon the consummation of such Liquidity Event; and provided, further, that the Warrants shall only be exercisable if (x) the
then-current holder is a Citizen of the United States (a “United States Citizen”) as defined in Section 40102(a)(15) of Title 49 of the United States Code, as in effect on the date in question, or any successor statute or
regulation, as interpreted by the United States Department of Transportation (the “DOT”) or any other federal department or agency at the time administering the federal aviation laws codified in title 49 of the United States Code in
applicable precedent or (y) the exercise is otherwise permissible under the United States federal statutory and/or regulatory restrictions with respect to the ownership and control of U.S. airlines by non-United States Citizens (the
“Foreign Ownership Limitations”). The Warrants shall expire and cease to be exercisable upon the earlier of (i) immediately after the closing of a Liquidity Event (excluding, for purposes of this Agreement, clause (i) of
such definition in the Third Amended and Restated Stockholders’ Agreement), if and to the extent not exercised in connection with such Liquidity Event and (ii) on the 30th anniversary of
the Fifth Closing Date. 

  
 4 

 4. Exercise of Warrant. 

(a) DOT Notification. The Company will provide the DOT with 30-day advance written notice prior to the intended exercise of any of the
Warrants by any Person who is not a United States Citizen. 
 (b) Exercise. Subject to the provisions of this Agreement, upon
surrender to the Company at its principal office of a Warrant Certificate with the Election to Purchase substantially in the form attached as Annex II to such Warrant Certificate duly executed, together with payment in accordance with the last
sentence of this Section 4(b) of the applicable Exercise Price then in effect (the date of such surrender, the “Exercise Date”), the Company shall issue and deliver promptly to the registered holder of such Warrant Certificate,
a certificate or certificates for the applicable Warrant Shares or other securities or property to which the registered holder is entitled, registered in the name of such registered holder or, upon the written order of such registered holder, in
such name or names as such registered holder may designate. Any certificate or certificates representing Warrant Shares shall be deemed to have been issued and any person so designated to be named therein shall be deemed to have become the holder of
record of the applicable Warrant Shares as of the date of the surrender of such Warrant Certificate (together with such duly executed Form of Election to Purchase) and payment of the Exercise Price. Payment of the applicable Exercise Price with
respect to an exercise of Warrants pursuant to this Section 4(b) shall be made, at the holder’s option, (x) in cash or (y) without the payment of cash, by reducing the number of shares of Class C Common Stock obtainable upon the
exercise of such Warrants (an exercise as provided under this clause (y), a “Cashless Exercise”) so as to yield a number of shares of Class C Common Stock issued upon the exercise of such Warrants equal to the product of
(A) the number of shares of Class C Common Stock that would have been issued if the Warrants being exercised had been exercised upon the full payment of the applicable Exercise Price in cash and (B) a fraction, the numerator of which is
the excess of the current market price per share of Common Stock on the applicable Exercise Date (determined in accordance with Section 7(f)) over the Exercise Price as of such Exercise Date and the denominator of which is the current market
price per share of the Common Stock as of such Exercise Date (determined in accordance with Section 7(f)). 
 (c) Exercise in Whole
or in Part. The purchase rights pursuant to Section 3 evidenced by a Warrant Certificate shall be exercisable, at the election of the registered holder thereof, in whole or in part. 

(d) Fractional Shares. No fractional shares of Common Stock shall be issued upon exercise of any Warrants. Instead the Company shall
round the results of an exercise down to the nearest full share of Common Stock and pay the warrant holder an amount in cash equal to the amount of the fractional share not issued multiplied by the applicable Exercise Price per share. 

(e) Reservation of Shares. The Company will at all times reserve and keep available out of its authorized Common Stock solely for the
purpose of issuance upon exercise of the Warrants as herein provided, such number of shares of Common Stock as shall from time to time be issuable upon the exercise of all outstanding Warrants. All shares of Common Stock that may be issued upon
exercise of the Warrants must and will be duly authorized and, upon 

  
 5 

 
issuance, be validly issued, fully paid and nonassessable and not subject to preemptive rights of any stockholder or other Person and free from all taxes, liens, charges and security interests
with respect to the issuance thereof, other than those taxes, liens, charges and security interests as may be created by the holder of such Warrants or its affiliates. 

5. Restrictions on Transfer. 

(a) Restrictions Under Stockholders Agreement. It is acknowledged that the Warrants (and the Class C Common Stock issuable upon the
exercise thereof) are subject to certain restrictions on transfer as set forth in the Third Amended and Restated Stockholders’ Agreement, and that any transferee of the Warrants shall execute an instrument signifying its agreement to be bound
by the terms and conditions of the Third Amended and Restated Stockholders’ Agreement. 
 (b) Warrant Register. The Company
shall maintain at its principal office a Warrant Register for registration of Warrant Certificates and transfers thereof. The Company shall initially register each of the outstanding Warrants in the name of the applicable Initial Holder. The Company
may deem and treat the registered holder(s) of the Warrant Certificates as the absolute owner(s) thereof and of the Warrants represented thereby (notwithstanding any notation of ownership or other writing on the Warrant Certificates made by any
person) for the purpose of any exercise thereof or any distribution to the holder(s) thereof, and for all other purposes, and the Company shall not be affected by any notice to the contrary. For the purpose of this Agreement, all references to a
holder herein shall refer to a registered holder of Warrants. 
 (c) Warrants and Warrant Shares Not Registered. Each registered
holder of the Warrants, by acceptance thereof, represents and acknowledges that the Warrants and the Warrant Shares which may be purchased upon exercise of a Warrant (x) are not registered under the Securities Act of 1933, as amended (the
“Securities Act”) or under any state securities laws, that the issuance of the Warrants and the offering and sale of such Warrant Shares are being made in reliance on the exemption from registration under Section 4(2) of the
Securities Act and from similar exemptions under state securities laws as not involving any public offering and that the Company’s reliance on such exemption is predicated in part on the representations made by the Initial Holders of the
Warrants to and with the Company that such holder (1) is acquiring the Warrants for investment for its own account, with no present intention of reselling or otherwise distributing the same, (2) is an “accredited investor” as
defined in Regulation D under the Securities Act, and (3) has such knowledge and experience in financial and business matters that it is capable of evaluating the merits and risks of the investments made or to be made in connection with the
acquisition and exercise of the Warrants and (y) are subject to restrictions on transfer under the Third Amended and Restated Stockholders’ Agreement. Neither the Warrants nor the related Warrant Shares may be transferred except
(i) in compliance with the terms of the Third Amended and Restated Stockholders’ Agreement and (ii) (A) pursuant to an effective registration statement under the Securities Act, (B) pursuant to Rule 144 under the Securities
Act if the transfer is permitted by Rule 144 and the transferor delivers a certificate, in form and substance reasonably satisfactory to the Company, that such transfer complies with the requirements of Rule 144, or (C) pursuant to any other
available exemption from registration if such transferee makes the representations set forth in the preceding sentence in writing to the Company and, in the case of any transfer pursuant to clause (B) or (C), accompanied by the

  
 6 

 
delivery to the Company of an opinion of counsel reasonably satisfactory to the Company by counsel reasonably satisfactory to the Company, stating that no registration is required under the
Securities Act. 
 (d) Warrants and Warrant Shares Not Registered. Each registered holder of the Warrants, by acceptance thereof,
agrees that prior to any disposition by such holder of the Warrants or of any Warrant Shares, such holder will give written notice to the Company expressing such holder’s intention to effect such disposition and describing briefly such
holder’s intention as to the manner in which the Warrants or the Warrant Shares theretofore issued or thereafter issuable upon exercise hereof, are to be disposed of together with the opinion described in Section 5(c), if required,
whereupon, but only if such transfer is not restricted pursuant to the Third Amended and Restated Stockholders’ Agreement and is otherwise permitted pursuant to Section 5(c) above, such transferring holder shall be entitled to dispose of
the Warrants and/or the Warrant Shares theretofore issued upon the exercise thereof, all in accordance with the terms of the notice delivered by such holder to the Company. In the event of such transfer, the Company shall register the transfer of
any outstanding Warrants in the Warrant Register upon surrender of the Warrant Certificate(s) evidencing such Warrants to the Company at its principal office, accompanied by a written instrument of transfer in form reasonably satisfactory to it,
duly executed by the registered holder thereof. Upon any such registration or transfer, new Warrant Certificate(s) evidencing such transferred Warrants shall be issued to the transferee(s) and the surrendered Warrant Certificate(s) shall be
canceled. 
 6. Listing on Securities Exchanges. If the Common Stock is listed on a stock exchange or quoted on the Nasdaq National
Market, the Company will use its reasonable efforts to procure at its sole expense the listing of all Warrant Shares (subject to issuance or notice of issuance) on all stock exchanges on which the Common Stock is then listed, or the quotation of the
Warrant Shares on the Nasdaq National Market, as the case may be, and maintain the listing or quotation of such shares and other securities after issuance. 

7. Adjustment of the Number of Warrant Shares Issuable. Subject to the limitations set forth herein, the number of Warrant Shares
issuable upon the exercise of each Warrant is subject to adjustment from time to time upon the occurrence following the Fifth Closing Date of the events enumerated in this Section 7. For purposes of this Section 7, “Common Stock”
means shares now or hereafter authorized of any class of common stock of the Company, including but not limited to the Class C Common Stock, and any other stock of the Company, however designated, that has the right (subject to any prior rights of
any class or series of preferred stock) to participate in any distribution of the assets or earnings of the Company without limit as to per share amount, but excluding any shares of any class of common stock of the Company issued or issuable upon
exercise or conversion of equity securities issued prior to the Fifth Closing Date. 
 (a) Adjustment for Change in Capital Stock. If
the Company: 
  

	 	(i)	pays a dividend or makes a distribution on its Common Stock, in either case in shares of its Common Stock; 

  

	 	(ii)	subdivides its outstanding shares of Common Stock into a greater number of shares; 

  
 7 

	 	(iii)	combines its outstanding shares of Common Stock into a smaller number of shares; 

  

	 	(iv)	makes a distribution on its Common Stock in shares of its capital stock other than Common Stock; or 

  

	 	(v)	issues by reclassification of its Common Stock any shares of its capital stock, 

 then the number of shares of
Common Stock issuable upon exercise of each Warrant immediately prior to such action shall be proportionately adjusted so that the holder of any Warrant thereafter exercised shall receive the aggregate number and kind of shares of capital stock of
the Company which he would have owned immediately following such action if such Warrant had been exercised immediately prior to such action. 

The adjustment shall become effective immediately after the record date in the case of a dividend or distribution and immediately after the
effective date in the case of a subdivision, combination or reclassification. 
 Such adjustment shall be made successively whenever any
event listed above shall occur. 
 (b) Adjustment for Rights Issue. 

If the Company distributes any rights, options or warrants to all holders of its Common Stock entitling them to purchase shares of Common
Stock at a price per share less than the current market price per share on the record date for determining holders entitled to the distribution of rights, options or warrants, the number of shares of Common Stock issuable upon exercise of each
Warrant shall be adjusted in accordance with the formula: 
  

									
		 	 N1 =

 
	 	 N x
  
	  	 O + A
	  	
	 	 	  	O + (A x P/M)	  	

 where: 
  

					
	N1	 	=	    	the adjusted number of shares of Common Stock issuable upon exercise of each Warrant.
			
	N	 	=	    	the current number of shares of Common Stock issuable upon exercise of each Warrant.
			
	O	 	=	    	the number of shares of Common Stock outstanding on the record date.
			
	A	 	=	    	the number of additional shares of Common Stock offered.
			
	P	 	=	    	the purchase price per share of the additional shares.
			
	M	 	=	    	the current market price per share of Common Stock on the record date.

  
 8 

 The adjustment shall be made successively whenever any such rights, options or warrants are
issued and shall become effective immediately after the record date for the determination of stockholders entitled to receive the rights, options or warrants. If at the end of the period during which such rights, options or warrants are exercisable,
not all rights, options or warrants shall have been exercised, the number of shares of Common Stock issuable upon exercise of each Warrant shall be immediately readjusted to what it would have been if “N” in the above formula had been the
number of shares actually issued at the end of the period. 
 (c) Adjustment for Other Distributions. If the Company distributes to
all holders of its Common Stock any of its assets (excluding cash distributions for which Section 7(p) hereof is applicable) or debt or other securities or any rights, options or warrants to purchase the assets or debt or other securities of
the Company, the number of shares of Common Stock issuable upon exercise of each Warrant shall be adjusted in accordance with the formula: 
  

									
		 	 N’ =
  
	 	 N  x  
  
	  	 M
	  	
	 	 	  	        M - F        	  	

 where: 
  

					
	N’	 	=	    	the adjusted number of shares of Common Stock issuable upon exercise of each Warrant.
			
	N	 	=	    	the current number of shares of Common Stock issuable upon exercise of each Warrant.
			
	M	 	=	    	the current market price per share of Common Stock on the record date mentioned below.
			
	F
	 	=	    	the fair market value on the record date of the assets, securities, rights, options or warrants distributable to one share of Common Stock after taking into account, in the case of any rights, options or warrants, the consideration
required to be paid upon exercise thereof. The Board shall reasonably determine the fair market value in good faith and such determination shall be conclusive.

 The adjustment shall be made successively whenever any such distribution is made and shall become effective
immediately after the record date for the determination of stockholders entitled to receive the distribution. This Section 7(c) does not apply to rights, options or warrants referred to in Section 7(b). If any adjustment is made pursuant
to this Section 7(c) as a result of the issuance of rights, options or warrants and at the end of the period during which any such rights, options or warrants are exercisable, not all such rights, options or warrants shall have been exercised,
the Warrant shall be immediately readjusted as if “F” in the above formula was the fair market value described in the definition of “F” on the record date of the assets or securities actually distributed upon exercise of such
rights, options or warrants divided by the number of shares of Common Stock outstanding on the record date. Notwithstanding anything to the contrary contained in this Section 7(c), if “M-F” in the above formula is less than $1.00, the
Company may elect to, and if “M-F” is a negative number, the Company shall, in lieu of the adjustment otherwise required by this Section 7(c), distribute to the 

  
 9 

 
holders of the Warrants, upon exercise thereof, the assets, securities, rights, options or warrants (or the proceeds thereof) which would have been distributed to such holders had such Warrants
been exercised immediately prior to the record date for such distribution. 
 (d) Adjustment for Common Stock Issue. If the Company
issues shares of Common Stock for a consideration per share less than the current market price per share on the date the Company fixes the offering price of such additional shares, the number of shares of Common Stock issuable upon exercise of each
Warrant shall be adjusted in accordance with the formula: 
  

									
		 	 N’ =
  
	 	 N  x  
  
	  	 A
	  	
	 	 	  	        O + P/M        	  	

 where: 
  

					
	N’	 	=	    	the adjusted number of shares of Common Stock issuable upon exercise of each Warrant.
			
	N	 	=	    	the current number of shares of Common Stock issuable upon exercise of each Warrant.
			
	O	 	=	    	the number of shares outstanding immediately prior to the issuance of such additional shares.
			
	P	 	=	    	the aggregate consideration received for the issuance of such additional shares.
			
	M	 	=	    	the current market price per share on the date of issuance of such additional shares.
			
	A	 	=	    	the number of shares of Common Stock outstanding immediately after the issuance of such additional shares.

 The adjustment shall be made successively whenever any such issuance is made, and shall become effective
immediately after such issuance. 
 This Section 7(d) does not apply to: 

 

	 	(i)	any of the transactions described in Sections 7(b) and 7(c), 

  

	 	(ii)	the exercise of Warrants, or the conversion or exchange of other securities convertible or exchangeable for Common Stock, or the issuance of Common Stock upon the exercise of rights, options or warrants issued to the
holders of Common Stock, 

  

	 	(iii)	 Common Stock (and options, restricted stock units and other equity incentives exercisable, convertible or exchangeable therefor)

  
 10 

	 	
issued to the Company’s employees, officers, directors, consultants or advisors (whether or not still in such capacity on the date of exercise) under bona fide employee benefit plans or
equity incentive plans adopted by the Board and approved by the holders of Common Stock when required by law, if such Common Stock would otherwise be covered by this Section 7(d), and 

 

	 	(iv)	Common Stock issued in a bona fide public offering. 

 (e) Adjustment for Convertible
Securities Issue. If the Company issues any securities convertible into or exchangeable for Common Stock (other than securities issued in transactions described in Sections 7(b) and 7(c)) for a consideration per share of Common Stock initially
deliverable upon conversion or exchange of such securities less than the current market price per share on the date of issuance of such securities, the number of shares of Common Stock issuable upon exercise of each Warrant shall be adjusted in
accordance with this formula: 
  

									
		 	 N’ =
  
	 	 N  x  
  
	  	 O + D
	  	
	 	 	  	        O + P/M        	  	

 where: 
  

					
	N’	 	=	    	the adjusted number of shares of Common Stock issuable upon exercise of each Warrant.
			
	N	 	=	    	the current number of shares of Common Stock issuable upon exercise of each Warrant.
			
	O	 	=	    	the number of shares of Common Stock outstanding immediately prior to the issuance of such securities.
			
	P	 	=	    	the aggregate consideration received for the issuance of such securities.
			
	M	 	=	    	the current market price per share on the date of issuance of such securities.
			
	D	 	=	    	the maximum number of shares of Common Stock deliverable upon conversion or in exchange for such securities at the initial conversion or exchange rate.

 The adjustment shall be made successively whenever any such issuance is made, and shall become effective
immediately after such issuance. 
 If all of the Common Stock deliverable upon conversion or exchange of such securities have not been
issued when such securities are no longer outstanding, then the number of shares of Common Stock issuable upon exercise of each Warrant shall promptly be readjusted to what it would have been had the adjustment upon the issuance of such securities
been made on the basis of the actual number of shares of Common Stock issued upon conversion or exchange of such securities. 

  
 11 

 This Section 7(e) does not apply to (i) options, restricted stock units and other
equity incentives exercisable, convertible or exchangeable for Common Stock that are issued to the Company’s employees, officers, directors, consultants or advisors (whether or not still in such capacity on the date of exercise) under bona fide
employee benefit plans or equity incentive plans adopted by the Board and approved by the holders of Common Stock when required by law or (ii) convertible securities issued in a bona fide public offering. 

(f) Current Market Price. In Sections 7(b), (c), (d) and (e), the current market price per share of Common Stock on any date is
the average of the Closing Prices (as defined below) of the Common Stock for 20 consecutive trading days commencing 30 trading days before the date in question. The term “Closing Price” shall mean, for each trading day, (A) in the
case of a security listed or admitted for trading on any United States national securities exchange or quotation system, the last reported sale price regular way, on such day, or if no sale takes place on such day, the average of the closing bid and
asked prices in the over-the-counter market as furnished by any New York Stock Exchange member firm selected from time to time by the Company for that purpose, (B) in the case of a security not then listed or admitted for trading on any United
States national securities exchange or quotation system and as to which no such reported sale price or bid or asked prices are available, the average or the reported high bid and low asked prices on such day, as reported by a reputable quotation
service, or a newspaper of general circulation in the Borough of Manhattan, City and State of New York, customarily published on each Business Day, designated by the Company, or if there shall be no bid and asked prices on such day, the average of
the high bid and low asked prices, as so reported, on the most recent day (not more than thirty (30) days prior to the date in question) for which prices have been so reported and (C) if there are not bid and asked prices reported during
the thirty (30) days prior to the date in question, the Closing Price will be the Fair Market Value. “Fair Market Value” means, as to any share of Common Stock, the cash price at which a willing seller would sell and a willing
buyer would buy such share of Common Stock in an arm’s length negotiated transaction without time constraints, as determined by a nationally recognized valuation firm selected by mutual agreement of the Initial Holders and the Company, whose
determination shall be final and binding on the parties hereto; provided, however, that (i) with respect to a sale of securities approved unanimously by the members of the Board of Directors of the Company, the Fair Market Value
of such securities shall be the price actually paid by the purchaser or purchasers of such securities, and (ii) with respect to a sale of securities pursuant to a public offering by the Company, the Fair Market Value of such securities shall be
the offering price of such securities. The fees and expenses of the valuation firm pursuant to the preceding sentence, if applicable, shall be paid by the Company. 

(g) Consideration Received. For purposes of any computation respecting consideration received pursuant to Sections 7(b), (d) or
(e), the following shall apply: 
 (A) in the case of the issuance of shares of Common Stock for cash, the consideration
shall be the gross proceeds to the Company from such issuance, which shall not include any deductions for any commissions, discounts, other expenses incurred by the Company in connection therewith or amounts paid or payable for accrued interest or
accrued dividends; 

  
 12 

 (B) in the case of the issuance of shares of Common Stock for a consideration in
whole or in part other than cash or, subject to clause (C) below, securities, the consideration other than cash shall be deemed to be the fair market value thereof as determined in good faith by the Board (irrespective of the accounting
treatment thereof), whose determination shall be conclusive; 
 (C) in the case of the issuance of shares of Common Stock for
a consideration in whole or in part consisting of securities, the value of any securities shall be deemed to be: (x) if traded on a securities exchange or through the Nasdaq National Market, the average of the closing prices of the securities
on such quotation system over the 30-day period ending three days preceding the day in question, (y) if actively traded over-the-counter, the average of the closing bid or sale prices (whichever is applicable) over the 30-day period ending
three days preceding the day in question and (z) if there is no active public market, the fair market value thereof, determined as provided in clause (B) above; and 

(D) in the case of the issuance of securities convertible into, exercisable for or exchangeable for shares of Common Stock, the
aggregate consideration received therefor shall be deemed to be the consideration received by the Company for the issuance of such securities plus the additional minimum consideration, if any, to be received by the Company upon the conversion,
exercise or exchange thereof for the maximum number of shares used to calculate the adjustment (the consideration in each case to be determined in the same manner as provided in clauses (A) through (C) of this Section 7(g). 

(h) When De Minimis Adjustment May Be Deferred. 

No adjustment in the number of shares of Common Stock issuable upon exercise of each Warrant need be made unless the adjustment would require
an increase or decrease of at least 1% in such number. Any adjustments that are not made shall be carried forward and taken into account in any subsequent adjustment. 

All calculations under this Section 7 shall be made to the nearest cent or to the nearest 1/100th of a share, as the case may be. 

(i) When No Adjustment Required. No adjustment need be made for a transaction referred to in Sections 7(b), (c), (d) or
(e) if the relevant Warrant holders are to participate, without requiring the Warrants to be exercised, in the transaction on a basis and with notice that the Board reasonably determines to be fair and appropriate in light of the basis and
notice on which holders of Common Stock participate in the transaction. A Warrant holder’s having the opportunity to participate in a transaction shall not of itself trigger the applicability of this subsection (i) in the absence of actual
participation (or election to participate) in such transaction by such Warrant holder. 
 To the extent the relevant Warrants become
convertible into cash, no adjustment need be made thereafter as to the amount of cash into which such Warrants are exercisable. Interest will not accrue on the cash. 

  
 13 

 (j) Notice of Adjustment. Upon any adjustment of the number of shares or Exercise Price
pursuant to Section 7, the Company shall within five days, mail to registered holders of the applicable Warrants, first class, postage prepaid, a notice of the adjustment together with a certificate from the Company’s independent public
accountants briefly stating the facts requiring the adjustment and the manner of computing it. 
 (k) Notice of Certain Transactions.
If: 
  

	 	(i)	the Company takes any action that would require an adjustment in the number of shares of Common Stock issuable upon exercise of a Warrant or Exercise Price pursuant to Sections 7(a), (b), (c), (d) or (e) and
if the Company does not arrange for the applicable Warrant holders to participate pursuant to Section 7(i); 

  

	 	(ii)	the Company takes any action that would require a supplemental Fifth Closing Investor LLC-MBO LLC Warrant Agreement pursuant to Section 7(l); or 

 

	 	(iii)	there is a liquidation or dissolution of the Company, 

 the Company shall mail to registered holders of the
applicable Warrants, first class, postage prepaid, a notice stating the proposed record date for a dividend or distribution or the proposed effective date of a subdivision, combination, reclassification, consolidation, merger, transfer, lease,
liquidation or dissolution. The Company shall mail the notice at least 15 days before such date. Failure to mail the notice or any defect in it shall not affect the validity of the transaction. 

(l) Reorganization of Company. If the Company (i) consolidates or merges with or into any person and upon completion of such
consolidation or merger any of Cyrus Aviation Partners II, L.P., the members of MBO LLC, Carola Holdings Limited or any of their respective Affiliates (as defined in the Third Amended and Restated Stockholders’ Agreement) holds 50% or more of
the voting power of such person (whether individually or in combination) or (ii) sells, transfers or disposes of all or substantially all of the assets to any or a combination of any of Cyrus Aviation Partners II, L.P., the members of MBO LLC,
Carola Holdings Limited or any of their respective Affiliates (the transactions contemplated by the foregoing clauses (i) and (ii) collectively, the “Reorganization”), then concurrently with the consummation of the
Reorganization, the corporation or other entity formed by or surviving such consolidation or merger or acquiring all or substantially all of the assets of the Company, as applicable, shall enter into a supplemental Fifth Closing Investor LLC-MBO LLC
Warrant Agreement providing for appropriate adjustments, if any, necessary to give full effect to the intent of this Agreement. The successor corporation or other entity shall mail to Warrant holders a notice describing the supplemental Fifth
Closing Investor LLC-MBO LLC Warrant Agreement. 
 If the issuer of securities deliverable upon exercise of Warrants under the supplemental
Fifth Closing Investor LLC-MBO LLC Warrant Agreement is an affiliate of the formed, surviving, transferee or lessee corporation, that issuer shall join in the supplemental Fifth Closing Investor LLC-MBO LLC Warrant Agreement. 

If this Section 7(l) applies, Sections 7(a), (b), (c), (d) and (e) do not apply. 

  
 14 

 (m) When Issuance or Payment May Be Deferred. In any case in which this Section 7
shall require that an adjustment in the number of shares of Common Stock issuable upon exercise of a Warrant be made effective as of a record date for a specified event, the Company may elect to defer until the occurrence of such event issuing to
the holder of any applicable Warrant exercised after such record date the Warrant Shares and other capital stock of the Company, if any, issuable upon such exercise over and above the Warrant Shares and other capital stock of the Company, if any,
issuable upon such exercise on the basis of the number of shares of Common Stock issuable upon exercise of the Warrant; provided, however, that the Company shall deliver to such holder a due bill or other appropriate instrument evidencing such
holder’s right to receive such additional Warrant Shares, other capital stock and cash upon the occurrence of the event requiring such adjustment. 

(n) Adjustment in Exercise Price. 

Upon each event that provides for an adjustment of the number of shares of Common Stock issuable upon exercise of a Warrant pursuant to this
Section 7, each applicable Warrant outstanding prior to the making of the adjustment shall thereafter have an adjusted applicable Exercise Price (calculated to the nearest ten millionth) obtained from the following formula: 

 

											
	 E1   

 
	 	 =  
  
	 	 E  
  
	  	 x
  
	  	 N
	  	
	 	 	  	  	N1	  	

 where: 
  

					
	E1	 	=	    	the adjusted Exercise Price.
			
	E	 	=	    	the Exercise Price prior to adjustment.
			
	N1	 	=	    	the adjusted number of Warrant Shares issuable upon exercise of an applicable Warrant by payment of the adjusted Exercise Price.
			
	N	 	=	    	the number of Warrant Shares previously issuable upon exercise of an applicable Warrant by payment of the Exercise Price prior to adjustment.

 Following any adjustment to the applicable Exercise Price pursuant to this Section 7, the amount payable,
when adjusted and together with any consideration allocated to the issuance of the applicable Warrants, shall never be less than the par value per Warrant Share at the time of such adjustment. Such adjustment shall be made successively whenever any
event listed above shall occur. The Company hereby agrees with each holder of Warrants that it shall not increase the par value of the Common Stock above its current par value of $.01 per share. 

(o) Form of Warrants. Irrespective of any adjustment in the number or kind of shares issuable upon the exercise of the Warrants or the
payment of the applicable Exercise Price, Warrant Certificates theretofore or thereafter issued may continue to state the same number and kind of shares and the same applicable Exercise Price as are stated in the Warrant Certificates initially
issuable pursuant to this Agreement without affecting the number and kind of such shares issuable upon the exercise of the Warrants or payment of the applicable Exercise Price. 

  
 15 

 (p) Cash Distributions. If the Company distributes cash as a dividend or other
distribution to all holders of its Common Stock no adjustment shall be made to the number of shares of Common Stock issuable upon the exercise of each Warrant pursuant to this Section 7. 

8. Exchange and Replacement of Warrant Certificates. Each Warrant Certificate is exchangeable without expense, upon the surrender
thereof by the registered holder thereof at the principal executive office of the Company, for a new Warrant Certificate of like tenor and date representing in the aggregate the right to purchase the same number of Warrant Shares in such
denominations as shall be designated by the registered holder thereof at the time of such surrender. Upon receipt by the Company of evidence reasonably satisfactory to it of the loss, theft, destruction or mutilation of any Warrant Certificate, and,
in case of loss, theft or destruction, of indemnity reasonably satisfactory to it, and reimbursement to the Company of all reasonable expenses incidental thereto, and upon surrender and cancellation of such Warrant Certificate, if mutilated, the
Company will make and deliver a new Warrant Certificate of like tenor, in lieu thereof. 
 9. Payment of Taxes. The Company will pay
all documentary stamp taxes attributable to the initial issuance of the Warrants and of the Warrant Shares upon the exercise of Warrants; provided, however, that the Company shall not be required to pay any tax or taxes which may be payable in
respect of any transfer involved in the issuance of any Warrant Certificates or any certificates for Warrant Shares in a name other than that of the registered holder of such Warrant Certificate, and the Company shall not be required to issue or
deliver such Warrant Certificates unless or until the person or persons requesting the issuance thereof shall have paid to the Company the amount of such tax or shall have established to the reasonable satisfaction of the Company that such tax has
been paid. 
 10. Legends. (a) This Warrant and the Warrant Shares issuable upon exercise hereof are subject in all respects to
the terms and conditions of the Third Amended and Restated Stockholders’ Agreement. No transfer, sale, assignment, hypothecation or other disposition of this Warrant or the Warrant Shares issuable upon exercise hereof may be made except in
accordance with the provisions of the Third Amended and Restated Stockholders’ Agreement. The holder of the Warrant, by acceptance of this Warrant, agrees to be bound by the applicable provisions of the Third Amended and Restated
Stockholders’ Agreement and all applicable benefits of the Third Amended and Restated Stockholders’ Agreement shall inure to such holder. 

(b) Except as otherwise provided in this Section 10, each Warrant Certificate and certificate for Warrant Shares initially issued upon
the exercise of this Warrant, and each Warrant Certificate and certificate for Warrants or Warrant Shares issued to any transferee of any such certificates, shall be stamped or otherwise imprinted with a legend in substantially the following form:

 “THE SECURITIES REPRESENTED BY THIS CERTIFICATE AND THE WARRANT SHARES ISSUABLE UPON EXERCISE HEREOF MAY NOT BE TRANSFERRED, SOLD,
ASSIGNED, PLEDGED, HYPOTHECATED OR OTHERWISE DISPOSED OF UNLESS SUCH TRANSFER, SALE, ASSIGNMENT, PLEDGE, HYPOTHECATION OR OTHER DISPOSITION COMPLIES WITH THE PROVISIONS OF THE THIRD AMENDED AND 

  
 16 

 
RESTATED STOCKHOLDERS’ AGREEMENT, DATED AS OF JANUARY 12, 2010 (THE “STOCKHOLDERS’ AGREEMENT”), AS MAY BE AMENDED, RESTATED OR SUPERSEDED FROM TIME TO TIME, AMONG
VIRGIN AMERICA INC. (THE “COMPANY”), CAROLA HOLDINGS LIMITED, VAI PARTNERS LLC AND THE OTHER PARTIES NAMED THEREIN, A COPY OF WHICH IS ON FILE AT THE REGISTERED OFFICE OF THE COMPANY. THE HOLDER OF THIS CERTIFICATE AND THE WARRANTS
SHARES ISSUABLE UPON EXERCISE HEREOF AGREES TO BE BOUND BY THE TERMS OF THE STOCKHOLDERS’ AGREEMENT. 
 IN ADDITION, THE SECURITIES
REPRESENTED BY THIS CERTIFICATE AND THE WARRANT SHARES ISSUABLE UPON EXERCISE HEREOF HAVE NOT BEEN REGISTERED UNDER UNITED STATES SECURITIES LAWS AND MAY NOT BE TRANSFERRED TO ANY PERSON UNLESS SUCH SECURITIES ARE REGISTERED OR TRANSFERRED IN
ACCORDANCE WITH AN EXEMPTION FROM REGISTRATION IN THE UNITED STATES. 
 THE SECURITIES EVIDENCED BY THIS CERTIFICATE AND THE WARRANT SHARES
ISSUABLE UPON EXERCISE HEREOF ARE SUBJECT TO RESTRICTIONS ON VOTING PROVIDED FOR IN THE STOCKHOLDERS’ AGREEMENT AND NO VOTE OF SUCH SECURITIES THAT CONTRAVENES SUCH STOCKHOLDERS’ AGREEMENT SHALL BE EFFECTIVE. 

THE TRANSFER OF THE WARRANTS REPRESENTED BY THIS CERTIFICATE AND THE WARRANT SHARES ISSUABLE UPON EXERCISE HEREOF IS RESTRICTED IN ACCORDANCE
WITH THE FIFTH CLOSING INVESTOR LLC-MBO LLC WARRANT AGREEMENT REFERRED TO HEREIN.” 
 (c) Notwithstanding the provisions of
Section 10(b), (i) the Company shall deliver certificates for Warrants or Warrant Shares without the second paragraph of the legend set forth in such paragraph if the securities referred to in such paragraph shall have been registered
under the Securities Act or if such legend is otherwise not required under the Securities Act, and if such legend has been set forth on any previously delivered certificates, such legend shall be removed from any certificates at the request of the
holder if the securities referred to in such clause have been registered under the Securities Act, or upon delivery of a legal opinion by such holder from counsel reasonably satisfactory to the Company that such legend is not otherwise required
under the Securities Act, and (ii) the Company shall deliver certificates for Warrants or Warrant Shares without the first and third paragraphs of the legend set forth in such clause if such legend is no longer required pursuant to the terms of
the Third Amended and Restated Stockholders’ Agreement. 
 11. Notices. All notices, requests, consents and other communications
hereunder shall be in writing and shall be deemed to have been duly made when delivered by hand or sent 

  
 17 

 
by facsimile transmission (with receipt confirmed), or, if timely delivered to an air courier guaranteeing overnight delivery service, on the next business day, or five business days after being
deposited in the mail, first class, certified or registered, postage prepaid, return receipt requested, in each case addressed as follows (or to such other place or places as either of the parties shall designate by written notice to the other):

  

	 	(i)	if to registered holder, to the address set forth on the Warrant Register maintained by the Company; and 

  

	 	(ii)	if to the Company, to: 

 Virgin America Inc. 

555 Airport Blvd., 
 Suite 200

 Burlingame, CA 94010 

Attention: General Counsel 

Telecopier: (###) ###-#### 
 12.
Amendment. The Company with the consent of the registered holders of at least a majority of the then-outstanding and unexercised Warrants may amend or supplement this Agreement or waive compliance by the Company in a particular instance with
any provision of this Agreement; provided that without the consent of each registered holder affected, no such amendment shall (a) with respect to Warrants held by a non-consenting registered holder, increase the applicable Exercise
Price, or decrease the number of Warrant Shares issuable upon exercise of any Warrant (other than pursuant to adjustments otherwise provided for in this Agreement, including the adjustments provided for in Section 7 hereof), (b) alter the
Company’s obligation to issue Warrant Shares upon exercise of the underlying Warrant (other than pursuant to adjustments otherwise provided for in this Agreement, including the adjustments provided for in Section 7 hereof),
(c) shorten the expiration date of the Warrants, (d) waive the application of the adjustment provisions contained in Section 7 in connection with any events to which such provisions apply or otherwise modify the adjustment provisions
contained in Section 7 in a manner that would have an adverse economic impact on the holders, or (e) otherwise be effective against such holder unless such amendment, modification or waiver does not treat such holder differently in any
respect from any other holder. The Company shall not amend, modify or change any provision of its articles or certificate of incorporation or bylaws to the extent that such amendment, modification or change would result in the Company being unable
to perform or comply with its obligations hereunder. 
 13. Successors. Except as otherwise provided herein, all the covenants and
provisions of this Agreement by or for the benefit of the Company and the registered holders of the Warrants shall inure to the benefit of their respective successors and assigns hereunder. 

14. Governing Law. This Agreement and each Warrant Certificate issued hereunder shall be deemed to be a contract made under the laws of
the State of New York and for all purposes shall be construed in accordance with the laws of such State. 

  
 18 

 15. Benefits of This Agreement. Nothing in this Agreement shall be construed to give to
any person other than the Company and the registered holders of the unexercised Warrant Certificates any legal or equitable right, remedy or claim under this Agreement, and this Agreement shall be for the sole and exclusive benefit of the Company
and such registered holders. 
 16. Counterparts. This Agreement may be executed in any number of counterparts and each of such
counterparts shall for all purposes be deemed to be an original, and such counterparts shall together constitute one and the same instrument. 

17. Headings. The headings in this Agreement are intended solely for convenience of reference and shall be given no effect in the
construction or interpretation of this Agreement. 
 18. Remedies. The Company and the holder hereof each stipulates that the
remedies at law of each party hereto in the event of any default or threatened default by the other party in the performance or compliance with any of the terms of this Warrant are not and will not be adequate and that, to the fullest extent
permitted by law, such terms may be specifically enforced by a decree for the specific performance of any agreement contained herein or by an injunction against a violation of any of the terms hereof or otherwise. 

19. Severability. The provisions of this Agreement are severable, and if any clause or provision shall be held invalid, illegal or
unenforceable in whole or in part in any jurisdiction, then such invalidity or unenforceability shall affect in that jurisdiction only such clause or provision, or part thereof, and shall not in any manner affect such clause or provision in any
other jurisdiction or any other clause or provision of this Agreement in any jurisdiction. 
 20. Effective Date. This Agreement
shall become effective immediately upon the Fifth Closing. 
 [Signature Page Follows] 

  
 19 

 IN WITNESS WHEREOF, the parties hereto have caused this Fifth Closing Investor LLC-MBO LLC
Warrant Agreement to be duly executed as of the day and year first above written. 
  

					
	VIRGIN AMERICA INC.
		
	By:	 	 /s/ Holly Nelson

		 	Name:	 	Holly Nelson
		 	Title:	 	SVP & Chief Financial Officer

  
 20 

 IN WITNESS WHEREOF, the parties hereto have caused this Fifth Closing Investor LLC-MBO LLC
Warrant Agreement to be duly executed as of the day and year first above written. 
  

					
	CYRUS AVIATION INVESTOR, LLC
		
	By:	 	 CYRUS AVIATION PARTNERS II, L.P.

Its Managing Member

		
	By:	 	 CYRUS CAPITAL PARTNERS GP, L.L.C.

Its General Partner

		
	By:	 	 /s/ Stephen C. Friedheim

		 	Name:	 	Stephen C. Friedheim
		 	Title:	 	Managing Member

  
 21 

 IN WITNESS WHEREOF, the parties hereto have caused this Fifth Closing Investor LLC-MBO LLC
Warrant Agreement to be duly executed as of the day and year first above written. 
  

					
	VAI MBO INVESTORS, LLC
		
	By:	 	 /s/ David Cush

		 	Name:	 	David Cush
		 	Title:	 	Manager

  
 22 

 Exhibit A 

THE SECURITIES REPRESENTED BY THIS CERTIFICATE AND THE WARRANT SHARES ISSUABLE UPON EXERCISE HEREOF MAY NOT BE TRANSFERRED, SOLD, ASSIGNED,
PLEDGED, HYPOTHECATED OR OTHERWISE DISPOSED OF UNLESS SUCH TRANSFER, SALE, ASSIGNMENT, PLEDGE, HYPOTHECATION OR OTHER DISPOSITION COMPLIES WITH THE PROVISIONS OF THE THIRD AMENDED AND RESTATED STOCKHOLDERS’ AGREEMENT, DATED AS OF
JANUARY 12, 2010 (THE “STOCKHOLDERS’ AGREEMENT”), AS MAY BE AMENDED, RESTATED OR SUPERSEDED FROM TIME TO TIME, AMONG VIRGIN AMERICA INC. (THE “COMPANY”), CAROLA HOLDINGS LIMITED, VAI PARTNERS LLC AND THE
OTHER PARTIES NAMED THEREIN, A COPY OF WHICH IS ON FILE AT THE REGISTERED OFFICE OF THE COMPANY. THE HOLDER OF THIS CERTIFICATE AND THE WARRANTS SHARES ISSUABLE UPON EXERCISE HEREOF AGREES TO BE BOUND BY THE TERMS OF THE STOCKHOLDERS’
AGREEMENT. 
 IN ADDITION, THE SECURITIES REPRESENTED BY THIS CERTIFICATE AND THE WARRANT SHARES ISSUABLE UPON EXERCISE HEREOF HAVE NOT BEEN
REGISTERED UNDER UNITED STATES SECURITIES LAWS AND MAY NOT BE TRANSFERRED TO ANY PERSON UNLESS SUCH SECURITIES ARE REGISTERED OR TRANSFERRED IN ACCORDANCE WITH AN EXEMPTION FROM REGISTRATION IN THE UNITED STATES. 

THE SECURITIES EVIDENCED BY THIS CERTIFICATE AND THE WARRANT SHARES ISSUABLE UPON EXERCISE HEREOF ARE SUBJECT TO RESTRICTIONS ON VOTING
PROVIDED FOR IN THE STOCKHOLDERS’ AGREEMENT AND NO VOTE OF SUCH SECURITIES THAT CONTRAVENES SUCH STOCKHOLDERS’ AGREEMENT SHALL BE EFFECTIVE. 

THE TRANSFER OF THE WARRANTS REPRESENTED BY THIS CERTIFICATE AND THE WARRANT SHARES ISSUABLE UPON EXERCISE HEREOF IS RESTRICTED IN ACCORDANCE
WITH THE FIFTH CLOSING INVESTOR LLC-MBO LLC WARRANT AGREEMENT REFERRED TO HEREIN. 
 No. W-     

FIFTH CLOSING C-7A WARRANT CERTIFICATE 

This Warrant Certificate certifies that, for value received, Cyrus Aviation Investor LLC (“Holder”), is the registered holder
of warrants (the “Warrants”) to purchase, subject to the conditions set forth in Section 3 of the Fifth Closing Investor LLC-MBO LLC Warrant Agreement dated as of January 12, 2010 between the Company, Holder and the other
parties 

  
 1 

 
named therein (the “Fifth Closing Investor LLC-MBO LLC Warrant Agreement”), up to 6,666,667 fully-paid and non-assessable shares (subject to adjustment in certain events as
provided in Section 7 of the Fifth Closing Investor LLC-MBO LLC Warrant Agreement) of Class C common stock, $0.01 par value (“Class C Common Stock”), of VIRGIN AMERICA INC., a Delaware corporation (the
“Company”), at the exercise price of $10.00 per share, subject to adjustment as provided in Section 7 of the Fifth Closing Investor LLC-MBO LLC Warrant Agreement (the “Exercise Price”), upon surrender of this
Warrant Certificate, together with the attached Form of Election to Purchase duly executed, and payment of the Exercise Price at the principal office of the Company, subject to the terms and conditions set forth herein and in the Fifth Closing
Investor LLC-MBO LLC Warrant Agreement. Upon exercise of the Warrants, payment of the applicable Exercise Price shall be made, at the holder’s option, in cash or pursuant to a Cashless Exercise (as defined in the Fifth Closing Investor LLC-MBO
LLC Warrant Agreement). 
 The Warrants evidenced by this Warrant Certificate may only be exercised at such times and in such amounts as are
provided for in the Fifth Closing Investor LLC-MBO LLC Warrant Agreement. 
 The Warrants evidenced by this Warrant Certificate are issued
pursuant to the Fifth Closing Investor LLC-MBO LLC Warrant Agreement, which Fifth Closing Investor LLC-MBO LLC Warrant Agreement is hereby incorporated by reference in and made a part of this instrument and is hereby referred to for a
description of the rights, limitation of rights, obligations, duties and immunities thereunder of the Company and the holders (the words “holders” or “holder” meaning the registered holders or registered holder) of the Warrants.
A copy of the Fifth Closing Investor LLC-MBO LLC Warrant Agreement may be obtained by the holder(s) hereof upon written request directed to the Company. 

The Fifth Closing Investor LLC-MBO LLC Warrant Agreement provides that upon the occurrence of certain events, the type and/or number of the
Company’s securities issuable upon exercise of the Warrants, and the Exercise Price, may, subject to certain conditions, be adjusted. 

Upon due presentment for registration of transfer of this Warrant Certificate at the principal office of the Company, a new Warrant
Certificate or Warrant Certificates of like tenor and evidencing in the aggregate a like number of Warrants shall be issued to the transferee(s) in exchange for this Warrant Certificate, subject to the limitations provided herein and in the Fifth
Closing Investor LLC-MBO LLC Warrant Agreement, without any charge except for any tax or other governmental charge imposed in connection therewith which is not payable by the Company pursuant to Section 9 of the Fifth Closing Investor LLC-MBO
LLC Warrant Agreement. 
 The Company may deem and treat the registered holder(s) hereof as the absolute owner(s) of this Warrant
Certificate (notwithstanding any notation of ownership or other writing hereon made by anyone), for the purpose of any exercise hereof and of any distribution to the holder(s) hereof and for all other purposes, and the Company shall not be affected
by any notice to the contrary. 

  
 2 

 All terms used in this Warrant Certificate which are not defined herein and are defined in the
Fifth Closing Investor LLC-MBO LLC Warrant Agreement shall have the meanings assigned to them in the Fifth Closing Investor LLC-MBO LLC Warrant Agreement. 

  
 3 

 IN WITNESS WHEREOF, the Company has caused this Warrant Certificate to be duly executed under its
corporate seal. 
 Dated: January     , 2010 

 

			
	VIRGIN AMERICA INC.
		
	By:	 	  

		
	Name:	 	  

		
	Title:	 	  

 [Signature page to Fifth Closing C-7A Warrant] 

  
 4 

 ANNEX I 

FORM OF ASSIGNMENT 
 (To be
executed by the registered holder if such holder 
 desires to transfer the Warrant Certificate.) 

FOR VALUE RECEIVED,
                                         hereby
sells, assigns and transfers unto
                                        , whose
address is
                                        , this
Warrant Certificate, together with all right, title and interest therein, and does hereby irrevocably constitute and appoint
                                         attorney
to transfer the within Warrant Certificate on the books of the within-named Company, with full power of substitution. 
  

							
	Dated:	 		 	Signature:	 	  

				
		 		 		 	(Signature must conform in all respects to name of holder as specified on the face of the Warrant Certificate. If the Common Stock of the Company is listed on or quoted on an exchange or quotation system, signature must be
guaranteed by a bank or trust company having an office or correspondent in the United States or a broker or dealer which is a member of a registered securities exchange or the National Association of Securities Dealers, Inc.)
				
		 		 		 	  

		 		 		 	(Insert Social Security or Other Identifying Number of Holder)

  
 5 

 ANNEX II 

FORM OF ELECTION TO PURCHASE 

The undersigned hereby irrevocably elects to exercise the right, represented by this Warrant Certificate, to purchase
                 shares of Class C Common Stock at the applicable Exercise Price. The holder herewith makes payment of the Exercise Price by applying
$        , in cash,][by reducing the number of shares of Class C Common Stock obtainable upon exercise of the Warrants (which number, if the Exercise Price were paid in cash, is noted in the preceding
sentence) pursuant to a Cashless Exercise in accordance with the terms of the Fifth Closing Investor LLC-MBO LLC Warrant Agreement. 
 The
undersigned requests that a certificate for such shares of Common Stock be registered in the name of
                                        , whose
address is
                                         and that
such certificate be delivered to
                                         whose
address is
                                        . 

 

							
	Dated:	 		 	Signature:	 	  

				
		 		 		 	(Signature must conform in all respects to name of holder as specified on the face of the Warrant Certificate. If the Common Stock of the Company is listed on or quoted on an exchange or quotation system, signature must be
guaranteed by a bank or trust company having an office or correspondent in the United States or a broker or dealer which is a member of a registered securities exchange or the National Association of Securities Dealers, Inc.)
				
		 		 		 	  

		 		 		 	(Insert Social Security or Other Identifying Number of Holder

  
 6 

 Exhibit B 

THE SECURITIES REPRESENTED BY THIS CERTIFICATE AND THE WARRANT SHARES ISSUABLE UPON EXERCISE HEREOF MAY NOT BE TRANSFERRED, SOLD, ASSIGNED,
PLEDGED, HYPOTHECATED OR OTHERWISE DISPOSED OF UNLESS SUCH TRANSFER, SALE, ASSIGNMENT, PLEDGE, HYPOTHECATION OR OTHER DISPOSITION COMPLIES WITH THE PROVISIONS OF THE THIRD AMENDED AND RESTATED STOCKHOLDERS’ AGREEMENT, DATED AS OF
JANUARY 12, 2010 (THE “STOCKHOLDERS’ AGREEMENT”), AS MAY BE AMENDED, RESTATED OR SUPERSEDED FROM TIME TO TIME, AMONG VIRGIN AMERICA INC. (THE “COMPANY”), CAROLA HOLDINGS LIMITED, VAI PARTNERS LLC AND THE
OTHER PARTIES NAMED THEREIN, A COPY OF WHICH IS ON FILE AT THE REGISTERED OFFICE OF THE COMPANY. THE HOLDER OF THIS CERTIFICATE AND THE WARRANTS SHARES ISSUABLE UPON EXERCISE HEREOF AGREES TO BE BOUND BY THE TERMS OF THE STOCKHOLDERS’
AGREEMENT. 
 IN ADDITION, THE SECURITIES REPRESENTED BY THIS CERTIFICATE AND THE WARRANT SHARES ISSUABLE UPON EXERCISE HEREOF HAVE NOT BEEN
REGISTERED UNDER UNITED STATES SECURITIES LAWS AND MAY NOT BE TRANSFERRED TO ANY PERSON UNLESS SUCH SECURITIES ARE REGISTERED OR TRANSFERRED IN ACCORDANCE WITH AN EXEMPTION FROM REGISTRATION IN THE UNITED STATES. 

THE SECURITIES EVIDENCED BY THIS CERTIFICATE AND THE WARRANT SHARES ISSUABLE UPON EXERCISE HEREOF ARE SUBJECT TO RESTRICTIONS ON VOTING
PROVIDED FOR IN THE STOCKHOLDERS’ AGREEMENT AND NO VOTE OF SUCH SECURITIES THAT CONTRAVENES SUCH STOCKHOLDERS’ AGREEMENT SHALL BE EFFECTIVE. 

THE TRANSFER OF THE WARRANTS REPRESENTED BY THIS CERTIFICATE AND THE WARRANT SHARES ISSUABLE UPON EXERCISE HEREOF IS RESTRICTED IN ACCORDANCE
WITH THE FIFTH CLOSING INVESTOR LLC-MBO LLC WARRANT AGREEMENT REFERRED TO HEREIN. 
 No. W-     

FIFTH CLOSING C-7B WARRANT CERTIFICATE 

This Warrant Certificate certifies that, for value received, VAI MBO Investors LLC (“Holder”), is the registered holder of
warrants (the “Warrants”) to purchase, subject to the conditions set forth in Section 3 of the Fifth Closing Investor LLC-MBO LLC Warrant Agreement dated as of January 12, 2010 between the Company, Holder and the other
parties 

  
 1 

 
named therein (the “Fifth Closing Investor LLC-MBO LLC Warrant Agreement”), up to 3,333,333 fully-paid and non-assessable shares (subject to adjustment in certain events as
provided in Section 7 of the Fifth Closing Investor LLC-MBO LLC Warrant Agreement) of Class C common stock, $0.01 par value (“Class C Common Stock”), of VIRGIN AMERICA INC., a Delaware corporation (the
“Company”), at the exercise price of $10.00 per share, subject to adjustment as provided in Section 7 of the Fifth Closing Investor LLC-MBO LLC Warrant Agreement (the “Exercise Price”), upon surrender of this
Warrant Certificate, together with the attached Form of Election to Purchase duly executed, and payment of the Exercise Price at the principal office of the Company, subject to the terms and conditions set forth herein and in the Fifth Closing
Investor LLC-MBO LLC Warrant Agreement. Upon exercise of the Warrants, payment of the applicable Exercise Price shall be made, at the holder’s option, in cash or pursuant to a Cashless Exercise (as defined in the Fifth Closing Investor LLC-MBO
LLC Warrant Agreement). 
 The Warrants evidenced by this Warrant Certificate may only be exercised at such times and in such amounts as are
provided for in the Fifth Closing Investor LLC-MBO LLC Warrant Agreement. 
 The Warrants evidenced by this Warrant Certificate are issued
pursuant to the Fifth Closing Investor LLC-MBO LLC Warrant Agreement, which Fifth Closing Investor LLC-MBO LLC Warrant Agreement is hereby incorporated by reference in and made a part of this instrument and is hereby referred to for a
description of the rights, limitation of rights, obligations, duties and immunities thereunder of the Company and the holders (the words “holders” or “holder” meaning the registered holders or registered holder) of the Warrants.
A copy of the Fifth Closing Investor LLC-MBO LLC Warrant Agreement may be obtained by the holder(s) hereof upon written request directed to the Company. 

The Fifth Closing Investor LLC-MBO LLC Warrant Agreement provides that upon the occurrence of certain events, the type and/or number of the
Company’s securities issuable upon exercise of the Warrants, and the Exercise Price, may, subject to certain conditions, be adjusted. 

Upon due presentment for registration of transfer of this Warrant Certificate at the principal office of the Company, a new Warrant
Certificate or Warrant Certificates of like tenor and evidencing in the aggregate a like number of Warrants shall be issued to the transferee(s) in exchange for this Warrant Certificate, subject to the limitations provided herein and in the Fifth
Closing Investor LLC-MBO LLC Warrant Agreement, without any charge except for any tax or other governmental charge imposed in connection therewith which is not payable by the Company pursuant to Section 9 of the Fifth Closing Investor LLC-MBO
LLC Warrant Agreement. 
 The Company may deem and treat the registered holder(s) hereof as the absolute owner(s) of this Warrant
Certificate (notwithstanding any notation of ownership or other writing hereon made by anyone), for the purpose of any exercise hereof and of any distribution to the holder(s) hereof and for all other purposes, and the Company shall not be affected
by any notice to the contrary. 

  
 2 

 All terms used in this Warrant Certificate which are not defined herein and are defined in the
Fifth Closing Investor LLC-MBO LLC Warrant Agreement shall have the meanings assigned to them in the Fifth Closing Investor LLC-MBO LLC Warrant Agreement. 

  
 3 

 IN WITNESS WHEREOF, the Company has caused this Warrant Certificate to be duly executed under its
corporate seal. 
 Dated: January     , 2010 

 

			
	VIRGIN AMERICA INC.
		
	By:	 	  

		
	Name:	 	  

		
	Title:	 	  

 [Signature page to Fifth Closing C-7B Warrant] 

  
 4 

 ANNEX I 

FORM OF ASSIGNMENT 
 (To be
executed by the registered holder if such holder 
 desires to transfer the Warrant Certificate.) 

FOR VALUE RECEIVED,
                                         hereby
sells, assigns and transfers unto
                                        , whose
address is
                                        , this
Warrant Certificate, together with all right, title and interest therein, and does hereby irrevocably constitute and appoint
                                         attorney
to transfer the within Warrant Certificate on the books of the within-named Company, with full power of substitution. 
  

							
	Dated:	 		 	Signature:	 	  

				
		 		 		 	(Signature must conform in all respects to name of holder as specified on the face of the Warrant Certificate. If the Common Stock of the Company is listed on or quoted on an exchange or quotation system, signature must be
guaranteed by a bank or trust company having an office or correspondent in the United States or a broker or dealer which is a member of a registered securities exchange or the National Association of Securities Dealers, Inc.)
				
		 		 		 	  

		 		 		 	(Insert Social Security or Other Identifying Number of Holder)

  
 5 

 ANNEX II 

FORM OF ELECTION TO PURCHASE 

The undersigned hereby irrevocably elects to exercise the right, represented by this Warrant Certificate, to purchase
                 shares of Class C Common Stock at the applicable Exercise Price. The holder herewith makes payment of the Exercise Price by applying
$        , in cash,][by reducing the number of shares of Class C Common Stock obtainable upon exercise of the Warrants (which number, if the Exercise Price were paid in cash, is noted in the preceding
sentence) pursuant to a Cashless Exercise in accordance with the terms of the Fifth Closing Investor LLC-MBO LLC Warrant Agreement. 
 The
undersigned requests that a certificate for such shares of Common Stock be registered in the name of
                                        , whose
address is
                                         and that
such certificate be delivered to
                                         whose
address is
                                        . 

 

							
	Dated:	 		 	Signature:	 	  

				
		 		 		 	(Signature must conform in all respects to name of holder as specified on the face of the Warrant Certificate. If the Common Stock of the Company is listed on or quoted on an exchange or quotation system, signature must be
guaranteed by a bank or trust company having an office or correspondent in the United States or a broker or dealer which is a member of a registered securities exchange or the National Association of Securities Dealers, Inc.)
				
		 		 		 	  

		 		 		 	(Insert Social Security or Other Identifying Number of Holder

  
 6 

 Exhibit C 

THE SECURITIES REPRESENTED BY THIS CERTIFICATE AND THE WARRANT SHARES ISSUABLE UPON EXERCISE HEREOF MAY NOT BE TRANSFERRED, SOLD, ASSIGNED,
PLEDGED, HYPOTHECATED OR OTHERWISE DISPOSED OF UNLESS SUCH TRANSFER, SALE, ASSIGNMENT, PLEDGE, HYPOTHECATION OR OTHER DISPOSITION COMPLIES WITH THE PROVISIONS OF THE THIRD AMENDED AND RESTATED STOCKHOLDERS’ AGREEMENT, DATED AS OF
JANUARY 12, 2010 (THE “STOCKHOLDERS’ AGREEMENT”), AS MAY BE AMENDED, RESTATED OR SUPERSEDED FROM TIME TO TIME, AMONG VIRGIN AMERICA INC. (THE “COMPANY”), CAROLA HOLDINGS LIMITED, VAI PARTNERS LLC AND THE
OTHER PARTIES NAMED THEREIN, A COPY OF WHICH IS ON FILE AT THE REGISTERED OFFICE OF THE COMPANY. THE HOLDER OF THIS CERTIFICATE AND THE WARRANTS SHARES ISSUABLE UPON EXERCISE HEREOF AGREES TO BE BOUND BY THE TERMS OF THE STOCKHOLDERS’
AGREEMENT. 
 IN ADDITION, THE SECURITIES REPRESENTED BY THIS CERTIFICATE AND THE WARRANT SHARES ISSUABLE UPON EXERCISE HEREOF HAVE NOT BEEN
REGISTERED UNDER UNITED STATES SECURITIES LAWS AND MAY NOT BE TRANSFERRED TO ANY PERSON UNLESS SUCH SECURITIES ARE REGISTERED OR TRANSFERRED IN ACCORDANCE WITH AN EXEMPTION FROM REGISTRATION IN THE UNITED STATES. 

THE SECURITIES EVIDENCED BY THIS CERTIFICATE AND THE WARRANT SHARES ISSUABLE UPON EXERCISE HEREOF ARE SUBJECT TO RESTRICTIONS ON VOTING
PROVIDED FOR IN THE STOCKHOLDERS’ AGREEMENT AND NO VOTE OF SUCH SECURITIES THAT CONTRAVENES SUCH STOCKHOLDERS’ AGREEMENT SHALL BE EFFECTIVE. 

THE TRANSFER OF THE WARRANTS REPRESENTED BY THIS CERTIFICATE AND THE WARRANT SHARES ISSUABLE UPON EXERCISE HEREOF IS RESTRICTED IN ACCORDANCE
WITH THE FIFTH CLOSING INVESTOR LLC-MBO LLC WARRANT AGREEMENT REFERRED TO HEREIN. 
 No. W-     

FIFTH CLOSING C-8 WARRANT CERTIFICATE 

This Warrant Certificate certifies that, for value received, Cyrus Aviation Investor LLC (“Holder”), is the registered holder
of warrants (the “Warrants”) to purchase, subject to the conditions set forth in Section 3 of the Fifth Closing Investor LLC-MBO LLC Warrant Agreement dated as of January 12, 2010 between the Company, Holder and the other
parties 

  
 1 

 
named therein (the “Fifth Closing Investor LLC-MBO LLC Warrant Agreement”), up to 20,000,000 fully-paid and non-assessable shares (subject to adjustment in certain events as
provided in Section 7 of the Fifth Closing Investor LLC-MBO LLC Warrant Agreement) of Class C common stock, $0.01 par value (“Class C Common Stock”), of VIRGIN AMERICA INC., a Delaware corporation (the
“Company”), at the exercise price of $15.00 per share, subject to adjustment as provided in Section 7 of the Fifth Closing Investor LLC-MBO LLC Warrant Agreement (the “Exercise Price”), upon surrender of this
Warrant Certificate, together with the attached Form of Election to Purchase duly executed, and payment of the Exercise Price at the principal office of the Company, subject to the terms and conditions set forth herein and in the Fifth Closing
Investor LLC-MBO LLC Warrant Agreement. Upon exercise of the Warrants, payment of the applicable Exercise Price shall be made, at the holder’s option, in cash or pursuant to a Cashless Exercise (as defined in the Fifth Closing Investor LLC-MBO
LLC Warrant Agreement). 
 The Warrants evidenced by this Warrant Certificate may only be exercised at such times and in such amounts as are
provided for in the Fifth Closing Investor LLC-MBO LLC Warrant Agreement. 
 The Warrants evidenced by this Warrant Certificate are issued
pursuant to the Fifth Closing Investor LLC-MBO LLC Warrant Agreement, which Fifth Closing Investor LLC-MBO LLC Warrant Agreement is hereby incorporated by reference in and made a part of this instrument and is hereby referred to for a
description of the rights, limitation of rights, obligations, duties and immunities thereunder of the Company and the holders (the words “holders” or “holder” meaning the registered holders or registered holder) of the Warrants.
A copy of the Fifth Closing Investor LLC-MBO LLC Warrant Agreement may be obtained by the holder(s) hereof upon written request directed to the Company. 

The Fifth Closing Investor LLC-MBO LLC Warrant Agreement provides that upon the occurrence of certain events, the type and/or number of the
Company’s securities issuable upon exercise of the Warrants, and the Exercise Price, may, subject to certain conditions, be adjusted. 

Upon due presentment for registration of transfer of this Warrant Certificate at the principal office of the Company, a new Warrant
Certificate or Warrant Certificates of like tenor and evidencing in the aggregate a like number of Warrants shall be issued to the transferee(s) in exchange for this Warrant Certificate, subject to the limitations provided herein and in the Fifth
Closing Investor LLC-MBO LLC Warrant Agreement, without any charge except for any tax or other governmental charge imposed in connection therewith which is not payable by the Company pursuant to Section 9 of the Fifth Closing Investor LLC-MBO
LLC Warrant Agreement. 
 The Company may deem and treat the registered holder(s) hereof as the absolute owner(s) of this Warrant
Certificate (notwithstanding any notation of ownership or other writing hereon made by anyone), for the purpose of any exercise hereof and of any distribution to the holder(s) hereof and for all other purposes, and the Company shall not be affected
by any notice to the contrary. 

  
 2 

 All terms used in this Warrant Certificate which are not defined herein and are defined in the
Fifth Closing Investor LLC-MBO LLC Warrant Agreement shall have the meanings assigned to them in the Fifth Closing Investor LLC-MBO LLC Warrant Agreement. 

  
 3 

 IN WITNESS WHEREOF, the Company has caused this Warrant Certificate to be duly executed under its
corporate seal. 
 Dated: January     , 2010 

 

			
	VIRGIN AMERICA INC.
		
	By:	 	  

		
	Name:	 	  

		
	Title:	 	  

 [Signature page to Fifth Closing C-8 Warrant] 

  
 4 

 ANNEX I 

FORM OF ASSIGNMENT 
 (To be
executed by the registered holder if such holder 
 desires to transfer the Warrant Certificate.) 

FOR VALUE RECEIVED,
                                         hereby
sells, assigns and transfers unto
                                        , whose
address is
                                        , this
Warrant Certificate, together with all right, title and interest therein, and does hereby irrevocably constitute and appoint
                                         attorney
to transfer the within Warrant Certificate on the books of the within-named Company, with full power of substitution. 
  

							
	Dated:	 		 	Signature:	 	  

				
		 		 		 	(Signature must conform in all respects to name of holder as specified on the face of the Warrant Certificate. If the Common Stock of the Company is listed on or quoted on an exchange or quotation system, signature must be
guaranteed by a bank or trust company having an office or correspondent in the United States or a broker or dealer which is a member of a registered securities exchange or the National Association of Securities Dealers, Inc.)
				
		 		 		 	  

		 		 		 	(Insert Social Security or Other Identifying Number of Holder)

  
 5 

 ANNEX II 

FORM OF ELECTION TO PURCHASE 

The undersigned hereby irrevocably elects to exercise the right, represented by this Warrant Certificate, to purchase
                 shares of Class C Common Stock at the applicable Exercise Price. The holder herewith makes payment of the Exercise Price [by applying
$        , in cash] [by reducing the number of shares of Class C Common Stock obtainable upon exercise of the Warrants (which number, if the Exercise Price were paid in cash, is noted in the preceding
sentence) pursuant to a Cashless Exercise] in accordance with the terms of the Fifth Closing Investor LLC-MBO LLC Warrant Agreement. 
 The
undersigned requests that a certificate for such shares of Common Stock be registered in the name of
                                        , whose
address is
                                         and that
such certificate be delivered to
                                         whose
address is
                                        . 

 

							
	Dated:	 		 	Signature:	 	  

				
		 		 		 	(Signature must conform in all respects to name of holder as specified on the face of the Warrant Certificate. If the Common Stock of the Company is listed on or quoted on an exchange or quotation system, signature must be
guaranteed by a bank or trust company having an office or correspondent in the United States or a broker or dealer which is a member of a registered securities exchange or the National Association of Securities Dealers, Inc.)
				
		 		 		 	  

		 		 		 	(Insert Social Security or Other Identifying Number of Holder

  
 6 

 Exhibit D 

THE SECURITIES REPRESENTED BY THIS CERTIFICATE AND THE WARRANT SHARES ISSUABLE UPON EXERCISE HEREOF MAY NOT BE TRANSFERRED, SOLD, ASSIGNED,
PLEDGED, HYPOTHECATED OR OTHERWISE DISPOSED OF UNLESS SUCH TRANSFER, SALE, ASSIGNMENT, PLEDGE, HYPOTHECATION OR OTHER DISPOSITION COMPLIES WITH THE PROVISIONS OF THE THIRD AMENDED AND RESTATED STOCKHOLDERS’ AGREEMENT, DATED AS OF
JANUARY 12, 2010 (THE “STOCKHOLDERS’ AGREEMENT”), AS MAY BE AMENDED, RESTATED OR SUPERSEDED FROM TIME TO TIME, AMONG VIRGIN AMERICA INC. (THE “COMPANY”), CAROLA HOLDINGS LIMITED, VAI PARTNERS LLC AND THE
OTHER PARTIES NAMED THEREIN, A COPY OF WHICH IS ON FILE AT THE REGISTERED OFFICE OF THE COMPANY. THE HOLDER OF THIS CERTIFICATE AND THE WARRANTS SHARES ISSUABLE UPON EXERCISE HEREOF AGREES TO BE BOUND BY THE TERMS OF THE STOCKHOLDERS’
AGREEMENT. 
 IN ADDITION, THE SECURITIES REPRESENTED BY THIS CERTIFICATE AND THE WARRANT SHARES ISSUABLE UPON EXERCISE HEREOF HAVE NOT BEEN
REGISTERED UNDER UNITED STATES SECURITIES LAWS AND MAY NOT BE TRANSFERRED TO ANY PERSON UNLESS SUCH SECURITIES ARE REGISTERED OR TRANSFERRED IN ACCORDANCE WITH AN EXEMPTION FROM REGISTRATION IN THE UNITED STATES. 

THE SECURITIES EVIDENCED BY THIS CERTIFICATE AND THE WARRANT SHARES ISSUABLE UPON EXERCISE HEREOF ARE SUBJECT TO RESTRICTIONS ON VOTING
PROVIDED FOR IN THE STOCKHOLDERS’ AGREEMENT AND NO VOTE OF SUCH SECURITIES THAT CONTRAVENES SUCH STOCKHOLDERS’ AGREEMENT SHALL BE EFFECTIVE. 

THE TRANSFER OF THE WARRANTS REPRESENTED BY THIS CERTIFICATE AND THE WARRANT SHARES ISSUABLE UPON EXERCISE HEREOF IS RESTRICTED IN ACCORDANCE
WITH THE FIFTH CLOSING INVESTOR LLC-MBO LLC WARRANT AGREEMENT REFERRED TO HEREIN. 
 No. W-     

FIFTH CLOSING C-9 WARRANT CERTIFICATE 

This Warrant Certificate certifies that, for value received, Cyrus Aviation Investor LLC (“Holder”), is the registered holder
of warrants (the “Warrants”) to purchase, subject to the conditions set forth in Section 3 of the Fifth Closing Investor LLC-MBO LLC Warrant Agreement dated as of January 12, 2010 between the Company, Holder and the other
parties 

  
 1 

 
named therein (the “Fifth Closing Investor LLC-MBO LLC Warrant Agreement”), up to 30,000,000 fully-paid and non-assessable shares (subject to adjustment in certain events as
provided in Section 7 of the Fifth Closing Investor LLC-MBO LLC Warrant Agreement) of Class C common stock, $0.01 par value (“Class C Common Stock”), of VIRGIN AMERICA INC., a Delaware corporation (the
“Company”), at the exercise price of $20.00 per share, subject to adjustment as provided in Section 7 of the Fifth Closing Investor LLC-MBO LLC Warrant Agreement (the “Exercise Price”), upon surrender of this
Warrant Certificate, together with the attached Form of Election to Purchase duly executed, and payment of the Exercise Price at the principal office of the Company, subject to the terms and conditions set forth herein and in the Fifth Closing
Investor LLC-MBO LLC Warrant Agreement. Upon exercise of the Warrants, payment of the applicable Exercise Price shall be made, at the holder’s option, in cash or pursuant to a Cashless Exercise (as defined in the Fifth Closing Investor LLC-MBO
LLC Warrant Agreement). 
 The Warrants evidenced by this Warrant Certificate may only be exercised at such times and in such amounts as are
provided for in the Fifth Closing Investor LLC-MBO LLC Warrant Agreement. 
 The Warrants evidenced by this Warrant Certificate are issued
pursuant to the Fifth Closing Investor LLC-MBO LLC Warrant Agreement, which Fifth Closing Investor LLC-MBO LLC Warrant Agreement is hereby incorporated by reference in and made a part of this instrument and is hereby referred to for a
description of the rights, limitation of rights, obligations, duties and immunities thereunder of the Company and the holders (the words “holders” or “holder” meaning the registered holders or registered holder) of the Warrants.
A copy of the Fifth Closing Investor LLC-MBO LLC Warrant Agreement may be obtained by the holder(s) hereof upon written request directed to the Company. 

The Fifth Closing Investor LLC-MBO LLC Warrant Agreement provides that upon the occurrence of certain events, the type and/or number of the
Company’s securities issuable upon exercise of the Warrants, and the Exercise Price, may, subject to certain conditions, be adjusted. 

Upon due presentment for registration of transfer of this Warrant Certificate at the principal office of the Company, a new Warrant
Certificate or Warrant Certificates of like tenor and evidencing in the aggregate a like number of Warrants shall be issued to the transferee(s) in exchange for this Warrant Certificate, subject to the limitations provided herein and in the Fifth
Closing Investor LLC-MBO LLC Warrant Agreement, without any charge except for any tax or other governmental charge imposed in connection therewith which is not payable by the Company pursuant to Section 9 of the Fifth Closing Investor LLC-MBO
LLC Warrant Agreement. 
 The Company may deem and treat the registered holder(s) hereof as the absolute owner(s) of this Warrant
Certificate (notwithstanding any notation of ownership or other writing hereon made by anyone), for the purpose of any exercise hereof and of any distribution to the holder(s) hereof and for all other purposes, and the Company shall not be affected
by any notice to the contrary. 

  
 2 

 All terms used in this Warrant Certificate which are not defined herein and are defined in the
Fifth Closing Investor LLC-MBO LLC Warrant Agreement shall have the meanings assigned to them in the Fifth Closing Investor LLC-MBO LLC Warrant Agreement. 

  
 3 

 IN WITNESS WHEREOF, the Company has caused this Warrant Certificate to be duly executed under its
corporate seal. 
 Dated: January     , 2010 

 

			
	VIRGIN AMERICA INC.
		
	By:	 	  

		
	Name:	 	  

		
	Title:	 	  

 [Signature page to Fifth Closing C-9 Warrant] 

  
 4 

 ANNEX I 

FORM OF ASSIGNMENT 
 (To be
executed by the registered holder if such holder 
 desires to transfer the Warrant Certificate.) 

FOR VALUE RECEIVED,
                                         hereby
sells, assigns and transfers unto
                                        , whose
address is
                                        , this
Warrant Certificate, together with all right, title and interest therein, and does hereby irrevocably constitute and appoint
                                         attorney
to transfer the within Warrant Certificate on the books of the within-named Company, with full power of substitution. 
  

							
	Dated:	 		 	Signature:	 	  

				
		 		 		 	(Signature must conform in all respects to name of holder as specified on the face of the Warrant Certificate. If the Common Stock of the Company is listed on or quoted on an exchange or quotation system, signature must be
guaranteed by a bank or trust company having an office or correspondent in the United States or a broker or dealer which is a member of a registered securities exchange or the National Association of Securities Dealers, Inc.)
				
		 		 		 	  

		 		 		 	(Insert Social Security or Other Identifying Number of Holder)

  
 5 

 ANNEX II 

FORM OF ELECTION TO PURCHASE 

The undersigned hereby irrevocably elects to exercise the right, represented by this Warrant Certificate, to purchase
                 shares of Class C Common Stock at the applicable Exercise Price. The holder herewith makes payment of the Exercise Price [by applying
$        , in cash,][by reducing the number of shares of Class C Common Stock obtainable upon exercise of the Warrants (which number, if the Exercise Price were paid in cash, is noted in the preceding
sentence) pursuant to a Cashless Exercise] in accordance with the terms of the Fifth Closing Investor LLC-MBO LLC Warrant Agreement. 
 The
undersigned requests that a certificate for such shares of Common Stock be registered in the name of
                                        , whose
address is
                                         and that
such certificate be delivered to
                                         whose
address is
                                        . 

 

							
	Dated:	 		 	Signature:	 	  

				
		 		 		 	(Signature must conform in all respects to name of holder as specified on the face of the Warrant Certificate. If the Common Stock of the Company is listed on or quoted on an exchange or quotation system, signature must be
guaranteed by a bank or trust company having an office or correspondent in the United States or a broker or dealer which is a member of a registered securities exchange or the National Association of Securities Dealers, Inc.)
				
		 		 		 	  

		 		 		 	(Insert Social Security or Other Identifying Number of Holder

  
 6

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