Document:

<PAGE>
                                                                Exhibit 10.47

                               SEVERANCE AGREEMENT
                                (Mark Skaletsky)

     THIS SEVERANCE AGREEMENT (this "Agreement") is entered into as of July 27,
                                     ---------
2001, by and between Mark Skaletsky (the "Employee") and MICROCIDE
                                          --------
PHARMACEUTICALS, INC., a Delaware corporation (the "Company").
                                                    -------

     WHEREAS, the Employee has an employment agreement (the "Prior Agreement")
                                                             ----- ---------
with The Althexis Company, Inc., a Delaware corporation, pursuant to which he
has certain rights and obligations thereunder; and

     WHEREAS, simultaneously with and contingent upon the termination of the
Prior Agreement, this Agreement shall become effective.

     NOW, THEREFORE, the parties hereto hereby agree as follows:

     1. Term of Agreement.
        -----------------

     This Agreement shall remain in effect from the date of the termination of
the Prior Agreement until the earlier of:

          (a) The date when the Employee's employment with the Company
     terminates for any reason not described in Section 6; or

          (b) The date when the Company has met all of its obligations under
     this Agreement following a Termination Event, as defined in Section 6,
     below.

     2. Definition of Change in Control.
        -------------------------------

     For all purposes under this Agreement, "Change in Control" shall mean (i) a
                                             ------ -- -------
merger, reorganization or other transaction or series of related transactions
(other than financings) following which the shareholders of the Company do not
own a majority of the capital stock of the surviving corporation or (ii) the
sale of all or substantially all of the assets of the Company.

     3. Definition of Good Reason.
        -------------------------

     For all purposes under this Agreement, "Good Reason" shall mean that the
                                             ---- ------
Employee:

          (a) Has been demoted or has incurred a material reduction in his
     authority or responsibility as an employee of the Company, including
     (without limitation) a reduction or elimination of his authority to approve
     expenditures or to hire, promote, demote or terminate subordinates;

          (b) Has incurred a reduction in his total compensation (including
     benefits) as an employee of the Company, other than pursuant to a
     Company-wide reduction of total compensation (including benefits) for
     employees of the Company generally; or

<PAGE>

                                      -2-

          (c) Has been notified that his principal place of work as an employee
     of the Company will be relocated by a distance of 50 miles or more.

     4. Definition of Cause.
        -------------------

     For all purposes under this Agreement, "Cause", shall mean:

          (a) A willful act by the Employee which constitutes misconduct or
     fraud and which is injurious to the Company; provided, however, that no
                                                  --------  -------
     act, or failure to act, by the Employee shall be considered "willful"
                                                                  -------
     unless committed without good faith and without a reasonable belief that
     the act or omission was in the Company's best interest; or

          (b) Conviction of, or a plea of "guilty" or "no contest" to, a felony.
                                           ------      -- -------

     The Board of Directors of the Company shall have sole discretion with
respect to whether any act or failure to act constitutes "Cause" for purposes of
this Agreement.

     5. Definition of Continuation Period.
        ---------------------------------

     For all purposes under this Agreement, "Continuation Period" shall mean the
                                             ------------ ------
period commencing on the date when the termination of the Employee's employment
under Section 6 is effective and ending on the earlier of:

          (a) The date twelve (12) months after the date when the employment
     termination was effective; or

          (b) The date of the Employee's death.

     6. Entitlement to Severance Pay and Benefits.
        -----------------------------------------

     The Employee shall be entitled to receive the severance pay described in
Section 7 (the "Severance Pay") and the benefits described in Section 8 from the
                --------- ---
Company if, and only if, one of the following events occurs (each a "Termination
                                                                     -----------
Event"):
-----

          (a) Within the first 12 month period after the occurrence of a Change
     in Control, the Employee voluntarily resigns his employment for Good
     Reason; or

          (b) Within the first 12 month period after the occurrence of a Change
     in Control, the Company terminates the Employee's employment for any reason
     other than Cause.

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                                      -3-

     7. Amount of Severance Pay.
         -----------------------

     During the Continuation Period, the Company shall pay the Employee
Severance Pay at an annual rate equal to the Employee's base compensation at the
annual rate in effect on the date when the termination of his employment with
the Company is effective. Such amount shall be paid pro-rata at periodic
intervals in accordance with the Company's standard payroll procedures.

     8. Other Benefits.
        --------------

          (a) Stock Options and Restricted Stock. All unvested stock options and
              ----------------------------------
     shares of restricted stock granted to Employee by the Company shall vest
     immediately upon the occurrence of a Termination Event. The
     post-termination exercise grace period under the Employee's stock options
     shall commence at the end of the Continuation Period. The Employee
     represents that he has consulted or will consult a tax adviser regarding
     the impact of this Subsection (a) on the tax treatment of incentive stock
     options and shares of restricted stock.

          (b) Group Insurance. At the commencement of the Continuation Period,
              ---------------
     the Employee (and, where applicable, his dependents) shall be entitled to
     convert his key employee long-term disability policy and group life
     insurance policy into individual policies pursuant to the terms of such
     policies. Should the Employee elect to convert either or both of such
     policies, the Company will pay the premiums for such policy or policies
     during the Continuation Period. At the commencement of the Continuation
     Period, the Employee shall be eligible to continue his group health
     continuation coverage under the Consolidated Omnibus Budget Reconciliation
     Act of 1986, and the Company will pay the premiums for such coverage during
     the Continuation Period. The foregoing notwithstanding, in the event that
     the Employee becomes eligible for comparable group insurance coverage in
     connection with new employment, the premium payments by the Company under
     this Subsection (b) shall terminate immediately.

          (c) Outplacement Services. Upon the occurrence of a Termination Event,
              ---------------------
     the Employee shall be entitled to reasonable outplacement services at the
     Company's expense. Such services shall be provided by a firm selected by
     the Employee from a list compiled by the Company and shall be limited to a
     period of six consecutive months.

     9. Limitation on Payments.
        ----------------------

          (a) Basic Rule. Any other provision of this Agreement notwithstanding,
              ----------
     the Company shall not be required to make any payment or property transfer
     to, or for the benefit of, the Employee (under this Agreement or otherwise)
     that would be nondeductible by the Company by reason of Section 280G of the
     Internal Revenue Code of 1986, as amended (the "Code"), or that would
                                                     ----
     subject the Employee to the excise tax described in Section 4999 of the
     Code. All calculations required by this Section 9 shall be performed by the
     independent auditors retained by the Company most recently prior to the
     Change in Control (the "Auditors"), based on information supplied by the
                             --------
     Company and the Employee, and shall be binding on the Company and the
     Employee. All fees and expenses of the Auditors shall be paid by the
     Company.

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                                      -4-

               (b) Reductions. If the amount of the aggregate payments or
                   ----------
          property transfers to the Employee must be reduced under this Section
          9, then the Employee shall direct in which order the payments or
          transfers are to be reduced, but no change in the timing of any
          payment or transfer shall be made without the Company's consent. As a
          result of uncertainty in the application of sections 280G and 4999 of
          the Code at the time of an initial determination by the Auditors
          hereunder, it is possible that a payment will have been made by the
          Company that should not have been made (an "Overpayment") or that an
                                                      -----------
          additional payment that will not have been made by the Company could
          have been made (an "Underpayment"). In the event that the Auditors,
                              ------------
          based upon the assertion of a deficiency by the Internal Revenue
          Service against the Company or the Employee that the Auditors believe
          has a high probability of success, determine that an Overpayment has
          been made, such Overpayment shall be treated for all purposes as a
          loan to the Employee that he shall repay to the Company, together with
          interest at the applicable federal rate specified in section
          7872(f)(2) of the Code; provided, however, that no amount shall be
                                  --------  -------
          payable by the Employee to the Company if and to the extent that such
          payment would not reduce the amount that is nondeductible under
          section 280G of the Code or is subject to an excise tax under section
          4999 of the Code. In the event that the Auditors determine that an
          Underpayment has occurred, such Underpayment shall promptly be paid or
          transferred by the Company to, or for the benefit of, the Employee,
          together with interest at the applicable federal rate specified in
          section 7872(f)(2) of the Code.

     10.  Non-Solicitation.
          ----------------

     After the occurrence of a Termination Event, the Employee agrees that for a
period of two years from the date of the Termination Event (the
"Non-Solicitation Term") he will not directly or indirectly solicit for
 ---------------- ----
employment any employee of the Company who was employed by the Company at the
time of the occurrence of the Termination Event and remains in the employment of
the Company during the Non-Solicitation Term.

     11. Successors.
         ----------

               (a) Company's Successors. The Company shall require any successor
                   --------------------
          (whether direct or indirect and whether by purchase, lease, merger,
          consolidation, liquidation or otherwise) to all or substantially all
          of the Company's business and/or assets, by an agreement in substance
          and form satisfactory to the Employee, to assume this Agreement and to
          agree expressly to perform this Agreement in the same manner and to
          the same extent as the Company would be required to perform it in the
          absence of a succession. For all purposes under this Agreement, the
          term "Company" shall include any successor to the Company's business
                -------
          and/or assets which executes and delivers the assumption agreement
          described in this Subsection (a) or which becomes bound by this
          Agreement by operation of law.

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                                      -5-

               (b) Employee's Successors. This Agreement and all rights of the
                   ----------------------
          Employee hereunder shall inure to the benefit of, and be enforceable
          by, the Employee's personal or legal representatives, executors,
          administrators, successors, heirs, distributees, devisees and
          legatees.

          12.  Miscellaneous Provisions.
               ------------------------

               (a) Notice. Notices and all other communications contemplated by
                   ------
          this Agreement shall be in writing and shall be deemed to have been
          duly given when personally delivered or when mailed by U.S. registered
          or certified mail, return receipt requested and postage prepaid. In
          the case of the Employee, mailed notices shall be addressed to him at
          the home address which he most recently communicated to the Company in
          writing. In the case of the Company, mailed notices shall be addressed
          to its corporate headquarters, and all notices shall be directed to
          the attention of its Secretary.

               (b) Waiver. No provision of this Agreement shall be modified,
                   ------
          waived or discharged unless the modification, waiver or discharge is
          agreed to in writing and signed by the Employee and by an authorized
          officer of the Company (other than the Employee). No waiver by either
          party of any breach of, or of compliance with, any condition or
          provision of this Agreement by the other party shall be considered a
          waiver of any other condition or provision or of the same condition or
          provision at another time.

               (c) Whole Agreement. No agreements, representations or
                   ---------------
          understandings (whether oral or written and whether express or
          implied) which are not expressly set forth in this Agreement have been
          made or entered into by either party with respect to the subject
          matter hereof.

               (d) No Setoff; Withholding Taxes. There shall be no right of
                   ----------------------------
          setoff or counterclaim, with respect to any claim, debt or obligation,
          against payments to the Employee under this Agreement. All payments
          made under this Agreement shall be subject to reduction to reflect
          taxes required to be withheld by law.

               (e) Choice of Law. The validity, interpretation, construction and
                   -------------
          performance of this Agreement shall be governed by the laws of the
          Commonwealth of Massachusetts.

               (f) Severability. The invalidity or unenforceability of any
                   ------------
          provision or provisions of this Agreement shall not affect the
          validity or enforceability of any other provision hereof, which shall
          remain in full force and effect.

               (g) Potential Pooling Transactions. In the event the Board
                   --------------------------------
          determines that the acceleration of options pursuant to Sections 8(a)
          above would preclude accounting for a proposed business transaction
          involving a Change in Control as a "Pooling of Interests," but the
          Board otherwise desires to approve and account for such transaction as
          a "Pooling of Interests," the acceleration of options described in
          Sections 8(a) above shall be null and void, and the Company shall
          enter into a consulting agreement with the employee covering services
          and compensation to be determined by the parties at that time. Such
          agreement shall be for a period of three years and shall not be
          subject to earlier termination unless by mutual consent of the
          parties.

<PAGE>

                                      -6-

               (h) Arbitration. Except as otherwise provided in Section 9, any
                   -----------
          dispute or controversy arising under or in connection with this
          Agreement shall be settled exclusively by arbitration in Boston,
          Massachusetts, in accordance with the rules of the American
          Arbitration Association then in effect. Judgment may be entered on the
          arbitrator's award in any court having jurisdiction. Punitive damages
          shall not be awarded.

               (i) No Assignment of Benefits. The rights of any person to
                   -------------------------
          payments or benefits under this Agreement shall not be made subject to
          option or assignment, either by voluntary or involuntary assignment or
          by operation of law, including (without limitation) bankruptcy,
          garnishment, attachment, or other creditor's process, and any action
          in violation of this Subsection (i) shall be void.

               (j) Employment Taxes. All payments made pursuant to this
                   -----------------
          Agreement will be subject to withholding of applicable income and
          employment taxes.

               (k) Counterparts. This Agreement may be executed in counterparts,
                   ------------
          each of which shall be deemed an original, but all of which together
          will constitute one and the same instrument.

            [The remainder of this page is intentionally left blank]

<PAGE>

                                 Microcide Pharmaceuticals, Inc.

                                 By:    /s/ James E. Rurka
                                    -------------------------------------------
                                    Name: James E. Rurka

                                    Title: President and Chief Executive Officer

                                        /s/ Mark Skaletsky
                                    --------------------------------------------
                                            Mark Skaletsky<PAGE>
                                                                Exhibit 10.48

                           THE ALTHEXIS COMPANY, INC.
                           FIRST AMENDED AND RESTATED
                       EXECUTIVE STOCK PURCHASE AGREEMENT

         This FIRST AMENDED AND RESTATED EXECUTIVE STOCK PURCHASE AGREEMENT
(this "Agreement") is made as of this 27th day of July, 2001, by and among The
       ---------
Althexis Company, Inc., a Delaware corporation (the "Company"), Paul J. Mellett
                                                     -------
(the "Purchaser"), and Mark Skaletsky, in his capacity as President of the
      ---------
Company and escrow holder hereunder (the "Escrow Holder").
                                          ------ ------

         WHEREAS, the Purchaser is the Vice President and Chief Financial
Officer of the Company;

         WHEREAS, the Company sold to the Purchaser, and the Purchaser purchased
from the Company, 136,078 shares of the Company's common stock, par value $0.01
per share ("Common Stock"), according to the terms and conditions of that
            ------ -----
certain Executive Stock Purchase Agreement, dated as of April 18, 2001 (the
"Original Purchase Agreement");
 -------- -------- ---------

         WHEREAS, the Company is entering into a certain Agreement and Plan of
Merger, of even date herewith (the "Merger Agreement"), by and among the
                                    ------ ---------
Company, Microcide Pharmaceuticals, Inc., a Delaware corporation ("Microcide"),
                                                                   ---------
and a wholly owned subsidiary of Microcide (the "Sub"), whereby the Sub will
                                                 ---
merge with and into the Company (the "Merger") with the Company as the surviving
                                      ------
entity and, as a condition to such Merger the Company has agreed to amend and
restate the terms of the Original Purchase Agreement; and

         WHEREAS, the parties to the Original Purchase Agreement (including a
secured promissory note and stock pledge agreement that were executed in
connection with the Original Purchase Agreement), desire to enter into this
First Amended and Restated Executive Stock Purchase Agreement to amend and
restate the terms of the Original Purchase Agreement (including the related note
and stock pledge agreement) in their entirety as set forth herein and therein.

         NOW, THEREFORE, in consideration of the promises and mutual covenants
herein set forth, and other good and valuable consideration, receipt of which is
hereby acknowledged, the parties hereto hereby mutually covenant and agree as
follows:

<PAGE>

                                      -2-

         1.       Definitions.  For purposes of this Agreement, the following
                  -----------
terms shall have the meanings provided therefor below in this Section 1 or
elsewhere in this Agreement as referred to below in this Section 1:

                  "Cause" shall mean: (i) any failure by the Purchaser to
                   -----
                  perform the services requested or assigned to the Purchaser by
                  the President or the Board of Directors of the Company, which
                  failure is not cured within 10 days after receipt of written
                  notice of such failure, (ii) negligence or willful misconduct
                  by the Purchaser in the performance of the Purchaser's
                  services to the Company that causes harm (or reasonably could
                  be expected to cause harm) to the business and operations of
                  the Company, (iii) any breach by the Purchaser of the
                  Purchaser's fiduciary duty to the Company, (iv) any act of
                  larceny, embezzlement, conversion or any other similar act
                  involving the misappropriation of Company funds, (v) the
                  Purchaser's breach of any provision of any agreement or
                  contract between the Purchaser and the Company, or (vi) the
                  Purchaser's conviction of, or entry of a pleading of guilty
                  to, any felony or a crime involving moral turpitude.

                  "Change in Control" shall mean any Sale Transaction in which
                   ------ -- -------
                  the stockholders of the Company immediately prior to such Sale
                  Transaction do not own or hold, directly or indirectly,
                  immediately after consummation of such Sale Transaction,
                  shares of capital stock of the surviving person or entity or
                  acquiring person or entity, as applicable, in connection with
                  such Sale Transaction representing at least a majority of the
                  total voting power of the outstanding capital stock of such
                  surviving person or entity or such acquiring person or entity,
                  as the case may be, provided, however, that if any such Sale
                                      --------  -------
                  Transaction involves the sale by the Company of newly issued
                  shares of capital stock of the Company, such Sale Transaction
                  shall not constitute a Change in Control within the meaning of
                  this definition if (i) the purchaser of such newly issued
                  shares of capital stock in such Sale Transaction is a venture
                  capital fund, any other public or private equity fund, a
                  financial institution or other type or kind of financial
                  investor, or (ii) the purchaser of such newly issued shares of
                  capital stock in such Sale Transaction has entered into an
                  agreement expressly prohibiting such purchaser from electing
                  or appointing fifty percent (50%) or more of the members of
                  the Board of Directors of the Company. For purposes of this
                  calculation, only those shares of capital stock of the
                  surviving person or entity or acquiring person or entity, as
                  applicable, that were issued in exchange for outstanding
                  securities of the

<PAGE>

                                      -3-

                  Company  shall be counted as being owned by the stockholders
                  of the Company immediately after the consummation of the Sale
                  Transaction

                  "Closing" shall have the meaning ascribed to such term in
                   -------
                  Section 6 below.

                  "Note" shall have the meaning ascribed to such term in Section
                   ----
                  3 below.

                  "Notice" shall have the meaning ascribed to such term in
                   ------
                  Section 6 below.

                  "Option" shall have the meaning ascribed to such term in
                   ------
                  Section 6 below.

                  "Sale Transaction" shall mean shall mean any merger or
                   ---- -----------
                  consolidation of the Company with and into another person or
                  entity, the sale or transfer of all or substantially all of
                  the assets of the Company, or the sale or transfer of shares
                  of capital stock of the Company, in each case in a single
                  transaction or in a series of related transactions.

                  "Shares" shall have the meaning ascribed to such term in
                   ------
                  Section 2 below.

                  "Shares Certificate" shall have the meaning ascribed to such
                   ------ -----------
                  term in Section 4 below.

                  "Stock Pledge Agreement" shall have the meaning ascribed to
                   ----- ------ ---------
                  such term in Section 3 below.

                  "Unvested Shares" shall mean, at the relevant time of
                   -------- ------
                  reference thereto, those Shares that have not vested on or
                  prior to such time pursuant to Section 5 or Section 6 hereof.

                  "Vested Shares" shall mean, at the relevant time of reference
                   ------ ------
                  thereto, those Shares that have vested on or prior to such
                  time pursuant to Section 5 or Section 6 hereof.

         2.       Sale of Stock. Pursuant to the Original Purchase Agreement,
                  -------------
the Company has sold to the Purchaser, and the Purchaser has purchased from the
Company, an aggregate of 136,078 shares of Common Stock (subject to adjustment
pursuant to Section 10 hereof, the "Shares"), at the price of $0.50 per share,
                                    ------
for an aggregate purchase price of $68,039.00.

<PAGE>

                                      -4-

         3.       Payment of Purchase Price. Pursuant to the Original Purchase
                  -------------------------
Agreement, the Purchaser paid $13,607.00 of the aggregate purchase price for the
Shares in cash and agreed to pay the remaining purchase price by the execution
and delivery to the Company of a secured promissory note, substantially in the
form of Exhibit A hereto (the "Note"), in the principal amount of $54,432.00
        ------- -              ----
payable to the Company. The Purchaser shall continue to secure payment and
performance of his obligations under the Note by the pledge of a portion of the
Shares to the Company pursuant to, and in accordance with, the terms and
conditions of a Stock Pledge Agreement substantially in the form of Exhibit B
                                                                    ------- -
hereto (the "Stock Pledge Agreement").
             ----- ------ ---------

         4.       Issuance of Shares. Pursuant to the Original Purchase
                  ------------------
Agreement, the Company prepared and duly executed a stock certificate,
registered in the name of the Purchaser, representing 136,078 shares of Common
Stock (the "Initial Shares Certificate"). The Initial Shares Certificate and any
            ------- ------ -----------
stock certificate prepared and duly executed by the Company, registered in the
name of the Purchaser, representing any Shares issued to the Purchaser at any
time after the date of this Agreement (each, an "Additional Shares
                                                 ---------- ------
Certificate"), shall each be endorsed with the legend set forth in Section 8(b)
-----------
below for so long as such legends are applicable. The Initial Shares Certificate
and each Additional Shares Certificate, if any, each accompanied by stock powers
or other appropriate instruments of assignment thereof duly executed in blank by
the Purchaser, have been or shall be delivered to the Escrow Holder to be held
in escrow pursuant to the provisions of Section 7 hereof. The Company shall
remove each legend from the Initial Shares Certificate and each Additional
Shares Certificate, if any, at such time as the legend is no longer applicable
to the shares represented by the certificate.

         5.       Vesting of Shares.
                  -----------------

                  (a)      Vesting Schedule. Subject to all of the provisions of
                           ----------------
this Section 5 and to the vesting provisions of Section 6 below, the Shares
shall vest over time, with 25% percent of the Shares vesting on April 1, 2002
and the remainder vesting in monthly installments, in as equal number of shares
as possible, at the end of each calendar month beginning April 30, 2002 and
ending April 30, 2005.

<PAGE>

                                      -5-

                  (b)      Acceleration of Vesting.
                           -----------------------

                           (i)     Notwithstanding anything in Section 5(a)
above or in Section 5(c) below to the contrary, in the event that the Company or
Microcide terminates the Purchaser's employment with the Company or Microcide
without Cause at any time prior to March 31, 2002, then the vesting of the
Shares that are then outstanding shall be accelerated such that twenty-five
percent (25%) of the Shares shall be fully vested on the date of such
termination.

                           (ii)    Notwithstanding anything in Section 5(a)
above to the contrary but subject to the provisions of Section 5(c) below, in
the event a Change in Control of Microcide occurs on or after September 31,
2002, then the vesting of all of the Shares that are outstanding immediately
prior to such Change in Control and that have not already previously vested
shall be accelerated such that all of such Shares shall be fully vested
immediately prior to the occurrence of such Change in Control.

                  (c)      No Further Vesting Following Termination. Except if
                           ----------------------------------------
and to the extent otherwise expressly provided in Section 5(b)(i) or Section 6,
upon termination of the Purchaser's employment with the Company or Microcide for
any reason or for no reason, regardless of whether such termination is effected
by the Company or Microcide, by the Purchaser (whether voluntarily or
involuntarily) or upon the Purchaser's death, none of the Unvested Shares owned
of record or beneficially by the Purchaser on the date of termination shall
thereafter vest.

                  (d)      Change in Control. In the event that, in connection
                           -----------------
with a Change in Control transaction, the Purchaser receives or acquires any
shares of stock in any person or entity or other property or assets of any kind
(collectively, the "New Property") in exchange for shares of stock in the
                    --- --------
Company (including, without limitation, the Shares) or other property or assets,
in either case that is owned or held by the Purchaser subject to this Agreement
(collectively, the "Subject Property"), then, following the Change in Control,
                    ------- --------
the provisions of this Agreement shall apply to such New Property to the same
extent as they would have applied to the Subject Property and the Purchaser
shall hold such New Property subject to all of the provisions of this Agreement
and shall comply and perform with all of his obligations under this Agreement
with respect to such New Property and such New Property shall thereafter be
deemed to be and treated as Subject Property.

                  (e)      Delivery of Vested Shares. Vested Shares shall, at
                           -------------------------
the request of the Purchaser, be released from the escrow provided for in
Section 7 hereof and shall be delivered to the Purchaser.

<PAGE>

                                      -6-

                  (f)      Escrow of Unvested Shares.  All Unvested Shares shall
                           -------------------------
be held in escrow pursuant to Section 7 below.

         6.       Repurchase Right.
                  ----------------

         (a) In the event of the termination of the Purchaser's employment with
the Company or Microcide for any reason or for no reason at any time, regardless
of whether such termination is effected by the Company or Microcide, by the
Purchaser (whether voluntarily or involuntarily) or upon the Purchaser's death,
the Company shall have the right, but not the obligation, to repurchase all or
any number of the Shares that are then Unvested Shares (after giving effect to
the acceleration of vesting provisions of Section 5(b), if applicable) subject
to and in accordance with the terms of this Section 6. The Company may exercise
its repurchase rights under this Section 6(a), by giving written notice of
exercise in accordance with the provisions of Section 6(b) below, within thirty
(30) days following the date of the termination or death of the Purchaser.

         (b) The Company may exercise its repurchase rights in this Section 6 by
delivering to the Purchaser, within the time periods specified in Section 6(a),
a written notice (the "Notice") of its intention to exercise its repurchase
                       ------
right under this Section 6, specifying the number of Unvested Shares that the
Company desires to repurchase, whereupon, subject to the provisions of this
Section 6, the Company shall become legally obligated to repurchase from the
Purchaser, and the Purchaser shall become legally obligated to sell to the
Company, at the Closing (as such term is defined below), the number of Unvested
Shares referred to in the Notice. The purchase price per share for all of the
Unvested Shares repurchased by the Company pursuant to this Section 6 shall be
$0.50 (subject to adjustment pursuant to Section 10 hereof and subject to
adjustment after the Merger taking into account the Exchange Ratio (as such term
is defined in the Merger Agreement)), payable, at the election of the Company,
in cash or through the cancellation of indebtedness. The closing (the "Closing")
                                                                       -------
of the repurchase by the Company of all or any number of Unvested Shares
pursuant to this Section 6 shall take place at the offices of Bingham Dana LLP,
150 Federal Street, Boston, MA 02110 at such time and on such date as the
Company shall specify in the Notice, provided that the date of the Closing shall
                                     --------
in no event be later than sixty (60) days after the date of the Notice. At the
Closing, the Purchaser shall deliver to the Company a certificate or
certificates evidencing the number of Unvested Shares to be repurchased, duly
endorsed for transfer or accompanied by duly executed stock powers, against
payment by the Company of the purchase price therefor in accordance with the
terms of this Section 6. In the event that the Company has a right to repurchase
any Unvested Shares pursuant to this Section 6 and elects not to, or fails to,
repurchase all or a portion of such Unvested Shares in accordance with the
provisions of this Section 6, then all of the Unvested Shares not so repurchased
shall

<PAGE>

                                      -7-

automatically become fully vested and, thereafter, shall be treated as Vested
Shares for all purposes of this Agreement.

         7.       Escrow of Unvested Shares.
                  -------------------------

                  (a)      Escrow Holder. Each stock certificate representing
                           -------------
Unvested Shares shall be held in escrow by the Escrow Holder, together with a
stock assignment, in the form attached hereto as Exhibit C, executed in blank by
                                                 ------- -
the Purchaser with respect to the Unvested Shares represented by such stock
certificate. Subject to the provisions of Section 5(e) hereof, each stock
certificate representing Unvested Shares shall be held in escrow pursuant to
this Section 7 until all of such Unvested Shares become fully vested pursuant
to, and in accordance with, the provisions of Section 5 or Section 6 hereof or
until all of such Unvested Shares are repurchased by the Company pursuant to,
and in accordance with, the provisions of Section 6 hereof, whichever occurs
earlier.

                  (b)      Rights of Purchaser with respect to Unvested Shares
                           ---------------------------------------------------
held in Escrow. Subject to the terms hereof, the Purchaser shall have all the
--------------
rights of a stockholder with respect to the Unvested Shares while they are held
in escrow, including without limitation, the right to vote such Unvested Shares
and receive any cash dividends declared thereon. If there is (i) any stock
dividend, stock split or other change in the Unvested Shares, or (ii) any merger
or sale of all or substantially all of the assets or other acquisition of the
Company, then, subject to the acceleration provisions set forth in Section 5(b)
hereof, any and all new, substituted or additional securities to which the
Purchaser is entitled by reason of his ownership of the Unvested Shares shall be
immediately subject to this escrow, deposited with the Escrow Holder and
included thereafter as "Unvested Shares" for purposes of this Agreement.

                  (c)      Obligations and Liabilities of the Escrow Holder. The
                           ------------------------------------------------
Escrow Holder shall be obligated only for the performance of such duties as are
specifically set forth herein and may rely and shall be protected in relying or
refraining from acting on any instrument reasonably believed by him to be
genuine and to have been signed or presented by the proper party or parties. The
Escrow Holder shall not be personally liable for any act he may do or refrain
from doing hereunder as Escrow Holder or as attorney-in-fact for the Purchaser,
provided that the Escrow Holder acts or refrains from acting in good faith and
--------
in the exercise of his own good judgment, and any act that he does or refrains
from doing pursuant to the advice of his own attorneys, who may be counsel to
the Company, shall be conclusive evidence of such good faith.

<PAGE>

                                      -8-

                  (d)      Duties of the Escrow Holder.
                           ---------------------------

                           (i)     In the event of any repurchase of Unvested
                  Shares pursuant to, and in accordance with, the provisions of
                  Section 6 hereof, the Escrow Holder shall take all steps
                  necessary to consummate such repurchase, including, but not
                  limited to, presentment of stock certificates representing
                  the Unvested Shares subject to such repurchase, together
                  with stock powers executed by or in the name of the
                  Purchaser appropriately completed by the Escrow Holder, to
                  the Company or its transfer agent with irrevocable
                  instructions to register the transfer of such Unvested
                  Shares into the name of the Company or its designee. The
                  Purchaser hereby appoints the Escrow Holder his irrevocable
                  attorney-in-fact to execute in his name, acknowledge and
                  deliver all stock powers and other instruments as may be
                  necessary or desirable with respect to the repurchase of any
                  Unvested Shares pursuant to, and in accordance with, the
                  provisions of Section 6 hereof.

                           (ii)    Upon the vesting of any Unvested Shares, the
                  Escrow Holder shall, at the request of the Purchaser, either
                  (i) promptly deliver to the Purchaser the certificate or
                  certificates representing such Unvested Shares that have
                  become vested or (ii) promptly cause a new certificate
                  endorsed with the appropriate legends to be issued for such
                  Unvested Shares that have become vested and shall deliver such
                  certificate to the Purchaser.

                           (iii)   The Escrow Holder may, but need not, submit a
                  memorandum to the Purchaser and to the Company setting forth
                  action the Escrow Holder intends to take with respect to the
                  escrow of the Unvested Shares and requesting the parties to
                  acknowledge the propriety of the intended action. If, in any
                  such case, either party fails or refuses to acknowledge the
                  propriety of the intended action, the Escrow Holder may seek
                  the advice of counsel, who may be counsel to the Company, and
                  any action taken in accordance with the written advice of such
                  counsel shall be full protection to the Escrow Holder in
                  respect thereto against any person. It is agreed that in any
                  event the Escrow Holder shall not be liable for any action or
                  failure to act taken in good faith, and that his liability
                  shall be limited to actions or inaction constituting gross
                  negligence or willful misconduct.

                           (iv)    It is understood and agreed that should any
                  dispute arise with respect to the delivery, ownership or right
                  of possession of the

<PAGE>

                                      -9-

                  Unvested Shares or other securities held by the Escrow Holder
                  hereunder, he is authorized and directed to retain in his
                  possession without liability to anyone all or any part of said
                  Unvested Shares or other securities until such dispute shall
                  have been settled either by mutual written agreement of the
                  parties concerned or by a final order, decree or judgment of a
                  court of competent jurisdiction after the time for appeal has
                  expired and no appeal has been perfected, but he shall be
                  under no duty whatsoever to institute or defend any such
                  proceedings.

                           (v)     The Escrow Holder is hereby expressly
                  authorized to comply with and obey orders, judgments or
                  decrees of any court. In case the Escrow Holder obeys or
                  complies with any such order, judgment or decree, he shall
                  not be liable to any of the parties hereto or to any other
                  person, firm or corporation by reason of such compliance,
                  notwithstanding any such order, judgment or decree being
                  subsequently reversed, modified, annulled, set aside,
                  vacated or found to have been entered without jurisdiction.

                           (vi)    The parties hereto understand that the Escrow
                  Holder is legal counsel to the Company, and that said counsel
                  may continue to act as such in the event of any dispute in
                  connection with this Agreement or any other transaction
                  contemplated herein or affected hereby.

                           (vii)   By signing this Agreement, the Escrow Holder
                  becomes a party to this Agreement only for the purposes of
                  this Section 7.

                  (e)      Change of Duties. The Escrow Holder's duties
                           ----------------
hereunder may be altered, amended, modified, or revoked only by a writing signed
by all of the parties hereto; provided, however, that the Company may at any
                              --------  -------
time, at its option, elect to terminate this escrow by notice to the Purchaser
and the Escrow Holder.

                  (f)      Costs and Fees. All reasonable costs, fees and
                           --------------
disbursements incurred by the Escrow Holder in connection with the performance
of his duties hereunder shall be borne by the Company.

                  (g)      Resignation. The Escrow Holder reserves the right,
                           -----------
upon notice to the Company and the Purchaser, to resign from his duties as
Escrow Holder and to appoint a substitute Escrow Holder.

<PAGE>

                                      -10-

         8.       Restrictions on Transfer.
                  ------------------------

                  (a)      No Transfers of Unvested Shares. Except for (i) the
                           -------------------------------
escrow described in Section 7 above or (ii) the transfer of any Unvested Shares
to the Company or in connection with a Change in Control of the Company as
contemplated by this Agreement, none of the Unvested Shares or any beneficial
interest therein shall be transferred, encumbered or otherwise disposed of in
any way until such Unvested Shares have become vested pursuant to, and in
accordance with, the provisions of Section 5 or Section 6 hereof.

                  (b)      Legend for Unvested Shares.  The certificates
                           --------------------------
evidencing any of the Unvested Shares shall be endorsed with a legend
substantially as follows:

                  "THIS CERTIFICATE AND THE SHARES REPRESENTED BY THIS
                  CERTIFICATE ARE SUBJECT TO A FIRST AMENDED AND RESTATED
                  EXECUTIVE STOCK PURCHASE AGREEMENT AND TO THE RESTRICTIONS
                  UPON TRANSFER CONTAINED THEREIN. A COPY OF SUCH EXECUTIVE
                  STOCK PURCHASE AGREEMENT WILL BE FURNISHED TO ANY INTERESTED
                  PARTY UPON WRITTEN REQUEST FREE OF CHARGE."

         9.       Investment Intent.  The Purchaser represents and warrants
                  -----------------
that any Shares acquired by him or that may be acquired by him are being or will
be, as the case may be, acquired for his own account for the purpose of
investment and not with a view to the resale or distribution thereof.

         10.      Adjustment for Stock Splits, etc.
                  --------------------------------

                  (a)      In the event that at any time after the date of this
Agreement the Company implements any stock dividend, reclassification,
recapitalization or other change in or with respect to the Common Stock
resulting in shares of any series of capital stock of the Company (other than
Common Stock) or other securities, property or assets of the Company being
distributed in respect of, or being exchanged for, shares of Common Stock
subject to this Agreement, then all references in this Agreement to such shares
of Common Stock and the repurchase price set forth in Section 6(b) shall be
appropriately adjusted to take into account any such shares of any series of
capital stock of the Company (other than Common Stock) or other securities,
property or assets of the Company distributed in respect of, or exchanged for,
outstanding shares of Common Stock and all of such shares of any series of
capital stock of the Company (other than

<PAGE>

                                      -11-

Common Stock) or other securities, property or assets of the Company shall be
held subject to all of the terms and conditions of this Agreement to the same
extent as if they were shares of Common Stock subject to this Agreement.

                  (b)      In the event that at any time after the date of this
Agreement the Company implements any stock split, stock dividend or reverse
stock split in or with respect to the Common Stock resulting in an increase or
decrease in the outstanding shares of Common Stock of the Company, then all
references in this Agreement to any number of shares of Common Stock shall be
appropriately adjusted to reflect any such stock split, stock dividend, or
reverse stock split.

                  (c)      In the event that any stock split, stock dividend,
reverse stock split, reclassification, recapitalization or other change in or
with respect to the Common Stock which may be adopted by the Company after the
date of this Agreement would cause an adjustment in any number of shares of
Common Stock or any number of shares of any other series or class of capital
stock of the Company that would otherwise result in fractional shares of Common
Stock or such other series or class of capital stock of the Company, or in the
event that any calculation or determination of the number of Shares that are or
have vested or that are subject to vesting under this Agreement would otherwise
result in fractional shares of Common Stock or any other series or class of
capital stock of the Company, then such fractional shares shall be disregarded
by rounding down to the nearest whole number of shares.

                  (d)      In the event that at any time after the date of this
Agreement the Company implements any stock split, stock dividend, reverse stock
split, reclassification, recapitalization or other change in or with respect to
the Common Stock, then all references in this Agreement to the purchase price
for any shares of Common Stock shall be appropriately adjusted to take into
account any such stock split, stock dividend, reverse stock split,
reclassification, recapitalization or other change in or with respect to the
Common Stock. Notwithstanding the foregoing, the purchase price with respect to
any shares of Common Stock shall never be reduced to a value below the par value
of such shares of Common Stock.

                  (e)      The foregoing provisions of this Section 10 shall
apply successively to one or more stock splits, stock dividends, reverse stock
splits, reclassifications, recapitalizations or other changes in or with respect
to the Common Stock.

         11.      Tax Consequences.
                  ----------------

                  (a)      Withholding Taxes.  It is understood by the parties
                           -----------------
hereto that the issuance and/or sale of any of the Shares to the Purchaser may
be deemed compensatory

<PAGE>

                                      -12-

in purpose and in effect and that, as a result, the Purchaser may be obligated
to advance to the Company amounts sufficient to pay withholding taxes in respect
of such Shares at the time Purchaser becomes subject to Federal income taxation
with respect to the receipt of such Shares. In the event that such withholding
tax obligations arise, the parties hereby agree that the Company shall have no
obligation to pay such withholding taxes, that payment of such withholding taxes
shall be the exclusive obligation of the Purchaser and that the Company shall be
entitled to withhold amounts from other sources of compensation otherwise due to
the Purchaser by the Company for purposes of satisfying such withholding taxes
if and to the extent that such withholding taxes have not been otherwise paid or
satisfied by the Purchaser. The Purchaser agrees on his behalf, and on behalf of
his successors and assigns, to indemnify the Company with respect to any
withholding tax payment that the Company is required to make that arises from
the issuance and/or sale of any of the Shares to the Purchaser.

                  (b)      Section 83(b) Election. Purchaser hereby acknowledges
                           ----------------------
delivery to the Company of a signed copy of any instrument, letter or other
document he executed and filed with the Internal Revenue Service evidencing his
election under Section 83(b)(2) of the Internal Revenue Code of 1986, as
amended, to treat his receipt of any of the Shares under the Original Purchase
Agreement as included in the Purchaser's gross income in the year of receipt.

         12.      General Provisions.
                  ------------------

                  (a)      Governing Law. This Agreement shall be governed by
                           -------------
the internal substantive laws of The Commonwealth of Massachusetts, without
reference to any conflict of laws provisions thereof that would implicate the
substantive or procedural laws of any other jurisdiction.

                  (b)      Entire Agreement. This Agreement represents the
                           ----------------
entire agreement between the parties with respect to the purchase of Common
Stock by the Purchaser from the Company and supersedes all prior written and
oral agreements and understandings between the parties (including, without
limitation, the Original Purchase Agreement) to the extent that such prior
written and oral agreements relate or pertain to the subject matter of this
Agreement. This Agreement may only be modified or amended pursuant to a written
agreement or instrument signed by the Company and the Purchaser or, with respect
to Section 7, the Company, the Purchaser and the Escrow Holder.

                  (c)      Notices. Any notice, demand, request or other
                           -------
communication hereunder to any party shall be deemed to be sufficient if
contained in a written instrument delivered in person or duly sent by first
class registered, certified or overnight mail, postage prepaid, or telecopied
with a confirmation copy by regular, certified or

<PAGE>

                                      -13-

overnight mail, postage prepaid, or sent by electronic mail with a confirmation
copy by regular, certified or overnight mail, postage prepaid, to such party at
the address, telecopier number or email address, as the case may be, set forth
below or such other address, telecopier number, or email address, as the case
may be, as may hereafter be designated in writing by the addressee to the
addressor listing all parties:

         if to the Company, to:

                  The Althexis Company, Inc.
                  1365 Main Street
                  Waltham, Massachusetts  02154
                  Attention:  Manuel Navia and/or Patrick Connelly
                  Facsimile:  (781) 647-5552

                  and

                  The Althexis Company, Inc.
                  c/o Paul Mass
                  Mass Ventures LLC
                  945 East Paces Ferry Road
                  Resurgens Plaza, Suite 2250
                  Atlanta, GA 30326
                  Facsimile:  (404) 760-2701

                  with a copy to:

                  Bingham Dana llp
                  150 Federal Street
                  Boston, MA  02110

                  Attention:  Julio E. Vega, Esq.
                  Facsimile:  (617) 951-8736

         if to the Purchaser, to:

                  Paul J. Mellett
                  108 Cedar Street
                  Walpole, MA  02081
                  Facsimile: ____________

<PAGE>

                                      -14-

                  with a copy to:

                  Elizabeth Grammer, Esq.
                  26 High Ridge Road
                  Topsfield, MA  01983
                  Facsimile:  (978) 887-1271

         if to the Escrow Holder, to:

                  The Althexis Company, Inc.
                  1365 Main Street
                  Waltham, Massachusetts  02154
                  Attention:  Mark Skaletsky
                  Facsimile:  (781) 647-5552

         All such notices, requests and other communications shall be deemed to
have been received: (i) in the case of personal delivery, on the date of such
delivery; (ii) in the case of mail, on the third day following deposit into the
mail; and (iii) in the case of facsimile transmission, when confirmed by
facsimile machine report.

                  (d)      Binding Effect. This Agreement shall inure to the
                           --------------
benefit of, be binding upon, the heirs, personal representatives, executors,
administrators, successors and/or permitted assigns of the parties. This
Agreement shall also inure to the benefit of, and be binding upon, any
transferee of the Shares.

                  (e)      Assignment. The rights, benefits and obligations of
                           ----------
the Company under this Agreement shall be transferable to any one or more
persons or entities, and all covenants and agreements hereunder shall inure to
the benefit of, and be enforceable by, the Company's successors and assigns;
provided, that any assignee agrees in writing to be bound by the terms and
--------
obligations of the Company hereunder. The Purchaser may not delegate any of its
obligations under this Agreement without the Company's prior written consent.

                  (f)      No Waiver. Either party's failure to enforce any
                           ---------
provision or provisions of this Agreement shall not in any way be construed as a
waiver of any such provision or provisions, nor prevent the party thereafter
from enforcing each and every other provision of this Agreement. The rights
granted both parties herein are cumulative and shall not constitute a waiver of
either party's right to assert all other legal remedies available to it under
the circumstances.

<PAGE>

                                      -15-

                  (g)      Severability. If any provision of this Agreement
                           ------------
shall be held illegal, invalid or unenforceable, such illegality, invalidity or
unenforceability shall attach only to such provision and shall not in any manner
affect or render illegal, invalid or unenforceable any other severable
provisions of this Agreement.

                  (h)      Headings.  Headings are for convenience only and are
                           --------
not deemed to be part of this Agreement.

                  (i)      Further Assurances.  The Purchaser agrees upon
                           ------------------
request to execute any further documents or instruments necessary or desirable
to carry out the purposes or intent of this Agreement.

                  (j)      Counterparts. This Agreement may be executed in
                           ------------
counterparts, all of which together shall for all purposes constitute one
Agreement, binding on each of the parties hereto notwithstanding that each such
party shall not have signed the same counterpart.

                  (k)      Relationship with Purchaser. The Company is not by
                           ---------------------------
reason of this Agreement or the issuance of any Shares obligated to continue the
Purchaser's association with the Company as an officer, director, employee, or
in any other capacity (other than as a stockholder).

                  (l)      Consent to Jurisdiction. In case of any dispute
                           -----------------------
hereunder, the parties will submit to the exclusive jurisdiction and venue of
any court of competent jurisdiction sitting in Suffolk County, Massachusetts,
and will comply with all requirements necessary to give such court jurisdiction
over the parties and the controversy.

                  (m)      Effectiveness of Agreement. This Agreement shall only
                           --------------------------
take effect at, and simultaneous with, the Effective Time (as such term is
defined in the Merger Agreement). In the event that the Merger is not
consummated, this Agreement shall be null and void and of no further effect, in
which case the terms of the Original Purchase Agreement shall continue in full
force and effect to govern the agreement of the parties with respect to the
matters contemplated thereby.

                [Remainder of this page intentionally left blank]

<PAGE>

         IN WITNESS WHEREOF, the parties have duly executed this First Amended
and Restated Executive Stock Purchase Agreement under seal as of the day and
year first set forth above.

PURCHASER

         /s/ Paul J. Mellett
------------------------------------
Paul J. Mellett

THE ALTHEXIS COMPANY, INC.

By:      /s/ Mark Skaletsky
   ---------------------------------
Name:    Mark Skaletsky
Title:   President

ESCROW HOLDER

         /s/ Mark Skaletsky
------------------------------------
Mark Skaletsky, President of
The Althexis Company, Inc.

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