メチロフィルス科

  メチロフィルス科（メチロフィルスか、Methylophilaceae）は真正細菌Pseudomonadota門ベータプロテオバクテリア綱スピリルム目の科の一つである。他の全てのPseudomonadota細菌と同様にメンバーは全てグラム陰性菌である。細胞は若干弯曲又は直線的な桿菌である。 以下の属を含む(2024年9月現在)。 Methylobacillus　メチロバチルス属 Yordy & Weaver 1977 (IJSEMリストに掲載 1980) Methylophilus　メチロフィルス属 Jenkins et al. 1987 Methyloradius　 Miyadera et al. 2022 (IJSEMリストに掲載 2022) Methylotenera　メチロテネラ属 Kalyuzhnaya et al. 2006 (IJSEMリストに掲載 2007)、修正　Kalyuzhnaya et al. 2012 (IJSEMリストに掲載 2012)、修正　Lv et al. 2020 (IJSEMリストに掲載 2020) Methylovorus　メチロボラス属 Govorukhina & Trotsenko 1991 (IJSEMリストに掲載 1991)、修正　Doronina et al. 2005 (IJSEMリストに掲載 2005) Novimethylophilus　ノビメチロフィルス属 Lv et al. 2018 (IJSEMリストに掲載 2018) Pseudomethylobacillus　シュードメチロバチルス属 Sheu et al. 2019 (IJSEMリストに掲載 2020) "Candidatus Methylopumilus" Salcher et al. 2015 (IJSEMリストに掲載 2020) [脚注の使い方] ^ a b Garrity GM, Bell JA, Lilburn T (2005). “Family I. Methylophilaceae fam. nov.”. In Brenner DJ, Krieg NR, Staley JT, Garrity GM. Bergey's Manual of Systematic Bacteriology, 2nd edn vol. 2 (The Proteobacteria), part C (The Alpha-, Beta-, Delta-, and Epsilonproteobacteria). New York: Springer. p. 770  ^ “List of new names and new combinations previously effectively, but not validly, published”. International Journal of Systematic and Evolutionary Microbiology: 1-6. (01 January 2006). doi:10.1099/ijs.0.64188-0.  ^ a b Owen Jenkins1, David Byrom2 and Dorothy Jones1 (1 Department of Microbiology, University of Leicester, Leicester LEI 7RH, United Kingdom ; 2 Biochemical Group, Research Department, ICI Agricultural Division, Billingham, Cleveland TS23 I LB, United Kingdom) (01 October 1987). “Methylophilus: a New Genus of Methanol-Utilizing Bacteria”. International Journal of Systematic and Evolutionary Microbiology 37 (4): 446-448. doi:10.1099/00207713-37-4-446.  ^ Jean P. Euzéby, Aidan C. Parte. “Family Methylophilaceae”. List of Prokaryotic names with Standing in Nomenclature. 2024年9月26日閲覧。 ^ JERRY R. YORDY1 and TERRY L. WEAVER1 (1 Department of Microbiology, Cornell University, Ithaca, New York 14853) (01 July 1977). “Methylobacillus: a New Genus of Obligately Methylotrophic Bacteria”. International Journal of Systematic and Evolutionary Microbiology 27 (3): 247-255. doi:10.1099/00207713-27-3-247.  ^ V. B. D. Skerman, Vicki. McGOWAN and P. H. A. Sneath (1: Department of Microbiology, University of Queensland, St. Lucia, Queensland 4067, Australia. 2: MRC Microbial Systematics Unit, University of Leicester, Leicester LE1 England 7RH) (01 January 1980). “Approved Lists of Bacterial Names”. International Journal of Systematic and Evolutionary Microbiology 30 (1): 225-420. doi:10.1099/00207713-30-1-225.  ^ Takeshi Miyadera 1 2, Hisaya Kojima 3, Manabu Fukui 2 (1 Graduate School of Environmental Science, Hokkaido University, Kita-10, Nishi-5, Kita-ku, Sapporo, 060-0810, Japan. ; 2 The Institute of Low Temperature Science, Hokkaido University, Kita-19, Nishi-8, Kita-ku, Sapporo, 060-0819, Japan. : 3 The Institute of Low Temperature Science, Hokkaido University, Kita-19, Nishi-8, Kita-ku, Sapporo, 060-0819, Japan.) (03 September 2021). “Methyloradius palustris gen. nov., sp. nov., a methanol-oxidizing bacterium isolated from snow”. Archives of Microbiology 203: 5715–5721. doi:10.1007/s00203-021-02559-1. PMID 34476514.  ^ Aharon Oren1ORCID icon and George M. Garrity2 (1 The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 9190401 Jerusalem, Israel ; 2 Department of Microbiology & Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA) (02 February 2022). “Valid publication of new names and new combinations effectively published outside the IJSEM. Validation List no. 203”. International Journal of Systematic and Evolutionary Microbiology 72 (1): 5167. doi:10.1099/ijsem.0.005167.  ^ Marina G Kalyuzhnaya 1, Sarah Bowerman 2, Jimmie C Lara 3, Mary E Lidstrom 3 1, Ludmila Chistoserdova 1 (1 Department of Chemical Engineering, University of Washington, Seattle, WA 98195, USA. ; 2 Department of Biology, University of Washington, Seattle, WA 98195, USA. 3 Department of Microbiology, University of Washington, Seattle, WA 98195, USA.) (01 December 2006). “Methylotenera mobilis gen. nov., sp. nov., an obligately methylamine-utilizing bacterium within the family Methylophilaceae”. International Journal of Systematic and Evolutionary Microbiology 56 (12): 2819-2823. doi:10.1099/ijs.0.64191-0. PMID 17158982.  ^ “Notification that new names and new combinations have appeared in volume 56, part 12, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 57 (3): 435-436. (01 March 2007). doi:10.1099/ijs.0.65006-0.  ^ Marina G Kalyuzhnaya 1, David A C Beck 2 3, Alexey Vorobev 2, Nicole Smalley 1, Dennis D Kunkel 4, Mary E Lidstrom 2 1, Ludmila Chistoserdova 2 (1 Department of Microbiology, University of Washington, Seattle, WA, USA. ; 2Department of Chemical Engineering, University of Washington, Seattle, WA, USA. ; 3 eScience Institute, University of Washington, Seattle, WA, USA. ; 4 Dennis Kunkel Microscopy, Inc., Box 2008 Kailua, HI 96734, USA. (01 January 2012). “Novel methylotrophic isolates from lake sediment, description of Methylotenera versatilis sp. nov. and emended description of the genus Methylotenera”. International Journal of Systematic and Evolutionary Microbiology 62 (1): 106-111. doi:10.1099/ijs.0.029165-0. PMID 21335496.  ^ “Notification that new names and new combinations have appeared in volume 62, part 1, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 62 (Pt_4). (01 April 2012). doi:10.1099/ijs.0.042309-0.  ^ Haoxin Lv 1 2, Nurettin Sahin 3, Akio Tani 2 (1 College of Food Science and Technology, Henan University of Technology, Zhengzhou, PR China. ; 2 Institute of Plant Science and Resources, Okayama University, Okayama, Japan. ; 3 Egitim Fakultesi, Mugla Sitki Kocman University, Kotekli, Mugla, Turkey.) (16 March 2020). “Methylotenera oryzisoli sp. nov., a lanthanide-dependent methylotrophic bacteria isolated from rice field soil”. International Journal of Systematic and Evolutionary Microbiology 70 (4): 2713-2718. doi:10.1099/ijsem.0.004098. PMID 32176600.  ^ Aharon Oren1 & George M. Garrity2 (1 The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 9190401 Jerusalem, Israel ; 2 Department of Microbiology & Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA) (30 July 2020). “Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 70, part 4 of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 70 (7): 4050-4060. doi:10.1099/ijsem.0.004260.  ^ NATALIA I. GOVORUKHINA1 and YURI A. TROTSENKO1 (1 Institute of Biochemistry and Physiology of Microorganisms, USSR Academy of Sciences, Pushchino, Moscow Region, 142292, USSR) (01 January 1991). “Methylovorus, a New Genus of Restricted Facultatively Methylotrophic Bacteria”. International Journal of Systematic and Evolutionary Microbiology 41 (1): 158-162. doi:10.1099/00207713-41-1-158.  ^ “Notification that New Names and New Combinations Have Appeared in the IJSB”. International Journal of Systematic and Evolutionary Microbiology 41 (3): 457-458. (01 July 1991). doi:10.1099/00207713-41-3-457.  ^ Nina V Doronina 1, Ekaterina G Ivanova 1, Yuri A Trotsenko 1 (1 G. K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences, Pushchino, Moscow region, 142290, Russia.) (01 March 2005). “Phylogenetic position and emended description of the genus Methylovorus”. International Journal of Systematic and Evolutionary Microbiology 55 (2): 903-906. doi:10.1099/ijs.0.63111-0. PMID 15774683.  ^ “Notification that new names and new combinations have appeared in volume 55, part 2, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 55 (4): 1399-1402. (01 July 2005). doi:10.1099/ijs.0.63844-0.  ^ Haoxin Lv 1, Nurettin Sahin 2, Akio Tani 1 (1 Institute of Plant Science and Resources, Okayama University, Okayama, Japan. ; 2 Egitim Fakultesi, Mugla Sitki Kocman University, 48170 Kotekli, Mugla, Turkey.) (06 February 2018). “Isolation and genomic characterization of Novimethylophilus kurashikiensis gen. nov. sp. nov., a new lanthanide-dependent methylotrophic species of Methylophilaceae”. Environmental Microbiology 20 (3): 1204-1223. doi:10.1111/1462-2920.14062. PMID 29411502.  ^ Aharon Oren1 and George M. Garrity2 (1 The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 9190401 Jerusalem, Israel ; 2Department of Microbiology and Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA) (05 September 2018). “List of new names and new combinations previously effectively, but not validly, published”. International Journal of Systematic and Evolutionary Microbiology 68 (9): 2707-2709. doi:10.1099/ijsem.0.002945.  ^ Ceshing Sheu 1, Cheng-Ye Cai 2, Shih-Yi Sheu 2, Zhi-Hao Li 3, Wen-Ming Chen 3 (1 Department of Applied Chemistry, Chaoyang University of Technology, No. 168, Jifong E. Rd., Wufeng, Taichung, Taiwan, ROC. ; 2 Department of Marine Biotechnology, National Kaohsiung University of Science and Technology, No. 142, Hai-Chuan Rd, Nan-Tzu, Kaohsiung City 811, Taiwan, ROC. 3 Laboratory of Microbiology, Department of Seafood Science, National Kaohsiung University of Science and Technology, No. 142, Hai-Chuan Rd, Nan-Tzu, Kaohsiung City 811, Taiwan, ROC.) (01 November 2019). “Pseudomethylobacillus aquaticus gen. nov., sp. nov., a new member of the family Methylophilaceae isolated from an artificial reservoir”. International Journal of Systematic and Evolutionary Microbiology 69 (11): 3551-3559. doi:10.1099/ijsem.0.00366110.1099/ijsem.0.003661. PMID 31424380.  ^ Aharon Oren1 & George M. Garrity2 (1 The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 9190401 Jerusalem, Israel ; 2 Department of Microbiology & Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA) (29 February 2020). “Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 69, part 11 of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 70 (2): 705-707. doi:10.1099/ijsem.0.003873.  ^ Michaela M Salcher 1 2, Stefan M Neuenschwander 1, Thomas Posch 1, Jakob Pernthaler 1 (1 Limnological Station, Institute of Plant Biology, University of Zurich, Kilchberg, Switzerland. ; 2 Institute of Hydrobiology, Biology Centre CAS, Ceske Budejovice, Czech Republic. (05 May 2015). “The ecology of pelagic freshwater methylotrophs assessed by a high-resolution monitoring and isolation campaign”. The ISME Journal 9 (11): 2442–2453. doi:10.1038/ismej.2015.55. PMC 4611508. PMID 25942006. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4611508/.  ^ Aharon Oren1ORCID icon, George M. Garrity2,3, Charles T. Parker3, Maria Chuvochina4 and Martha E. Trujillo5 (1 The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 9190401 Jerusalem, Israel ; 2 Department of Microbiology & Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA ; 3 NamesforLife, LLC, PO Box 769, Okemos MI 48805-0769, USA ; 4 Australian Centre for Ecogenomics, University of Queensland, St. Lucia QLD 4072, Brisbane, Australia ; 5 Departamento de Microbiología y Genética, Campus Miguel de Unamuno, Universidad de Salamanca, 37007, Salamanca, Spain) (30 June 2020). “Lists of names of prokaryotic Candidatus taxa”. International Journal of Systematic and Evolutionary Microbiology 70 (7): 3956-4042. doi:10.1099/ijsem.0.003789.