ズーグレア科

ズーグレア科（ズーグレアか、Zoogloeaceae）は真正細菌Pseudomonadota門ベータプロテオバクテリア綱ロドシクルス目の科の一つである。 以下の属を含む(2024年9月現在)。 Aromatoleum　 Rabus et al. 2019 (IJSEMリストに掲載 2019) Azoarcus　アゾアーカス属 Reinhold-Hurek et al. 1993 (IJSEMリストに掲載 1993)修正　Fu et al. 2019 (IJSEMリストに掲載 2019) Cognatazoarcus　 Huang et al. 2022 (IJSEMリストに掲載 2022) Denitromonas　デニトロモナス属 (ex Orla-Jensen 1909) Reyes-Umana & Coates 2024 (IJSEMリストに掲載 2024) Nitrogeniibacter　 Liao et al. 2021 (IJSEMリストに記載 2021) Niveibacterium　 Chun et al. 2016(IJSEMリストに記載 2016) Parazoarcus　 Huang et al. 2022 (IJSEMリストに掲載 2022) Pseudazoarcus　 Huang et al. 2022 (IJSEMリストに掲載 2022) Pseudothauera　 Huang et al. 2022 (IJSEMリストに掲載 2022) Thauera　タウエラ属 Macy et al. 1993 (IJSEMリストに掲載 1993)、修正　Anders et al. 1995 (IJSEMリストに掲載 1995)、修正　Song et al. 1998 (IJSEMリストに掲載 1998)、修正　Yin et al. 2017 (IJSEMリストに掲載 2018) Uliginosibacterium　 Weon et al. 2008 (IJSEMリストに掲載 2008)、修正　Kang et al. 2017 (IJSEMリストに掲載 2018) Zoogloea　ズーグレア属 Itzigsohn 1868 (IJSEMリストに掲載 1980)、修正　Shin et al. 1993 (IJSEMリストに掲載 1994)、修正　Dahal et al. 2020 (IJSEMリストに掲載 2021) ^ Boden, R; Hutt, LP, Rae AW (2017). “Reclassification of Thiobacillus aquaesulis (Wood & Kelly, 1995) as Annwoodia aquaesulis gen. nov., comb. nov., transfer of Thiobacillus (Beijerinck, 1904) from the Hydrogenophilales to the Nitrosomonadales, proposal of Hydrogenophilalia class. nov. within the 'Proteobacteria', and four new families within the orders Nitrosomonadales and Rhodocyclales”. International Journal of Systematic and Evolutionary Microbiology 67 (5): 1191–1205. doi:10.1099/ijsem.0.001927. hdl:10026.1/8740. PMID 28581923.  ^ Aharon Oren1 and George M. Garrity2 (1: The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 91904 Jerusalem, Israel, 2: Department of Microbiology & Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA) (01 August 2017). “Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 67, part 5, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 67 (8): 2495-2498. doi:10.1099/ijsem.0.002156.  ^ a b Itzigsohn H (19 November 1867). “Entwicklungsvorgänge von Zoogloea, Oscillaria, Synedra, Staurastrum, Spirotaenia und chroolepus”. Sitzungs-Berichte der Gesellschaft naturforschender Freunde zu Berlin (Akademische Buchdruckerei in der Nicolai'schen Buchhandlung, Berlin).  ^ a b V. B. D. Skerman, Vicki McGowan and P. H. A. Sneath (1: Department of Microbiology, University of Queensland, St. Lucia, Queensland 4067, Australia, 2: MRC Microbial Systematics Unit, University of Leicester, Leicester LE1 England 7RH) (01 January 1980). “Approved Lists of Bacterial Names”. International Journal of Systematic and Evolutionary Microbiology. doi:10.1099/00207713-30-1-225.  ^ a b Yong Kook Shin1, Akira Hiraishi2 and Junta Sugiyama1 (1: Institute of Molecular and Cellular Biosciences, University of Tokyo, Yayoi 1-1-1, Bunkyo-ku, Tokyo 113, Japan, 2: Laboratory of Environmental Biotechnology, Konishi Co., Yokokawa, Sumida-ku, Tokyo 130, Japan) (01 October 1993). “Molecular Systematics of the Genus Zoogloea and Emendation of the Genus”. International Journal of Systematic and Evolutionary Microbiology 43 (4): 826-31. doi:10.1099/00207713-43-4-826. PMID 8240962.  ^ a b “Notification that New Names and New Combinations Have Appeared in Volume 43, No. 4, of the IJSB”. International Journal of Systematic and Evolutionary Microbiology 44 (1): 184. (01 January 1994). doi:10.1099/00207713-44-1-184.  ^ a b Ram Hari Dahal1, Dhiraj Kumar Chaudhary2, Dong-Uk Kim3 and Jaisoo Kim1 (1: Department of Life Science, College of Natural Sciences, Kyonggi University, Suwon, Kyonggi-Do 16227, Republic of Korea, 2: Department of Environmental Engineering, Korea University Sejong Campus, Sejong City 30019, Republic of Korea, 3: Department of Biological Science, College of Science and Engineering, Sangji University, Wonju, Republic of Korea) (25 August 2020). “Zoogloea dura sp. nov., a N2-fixing bacterium isolated from forest soil and emendation of the genus Zoogloea and the species Zoogloea oryzae and Zoogloea ramigera”. International Journal of Systematic and Evolutionary Microbiology 70 (10): 5312-5318. doi:10.1099/ijsem.0.004416. PMID 32841112.  ^ a b Aharon Oren1 and George M. Garrity2 (1: The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 9190401 Jerusalem, Israel, 2: Department of Microbiology & Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA) (29 January 2021). “Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 70, part 10 of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 71 (1): 4565. doi:10.1099/ijsem.0.004565.  ^ Jean P. Euzéby, Aidan C. Parte. “Family Zoogloeaceae”. List of Prokaryotic names with Standing in Nomenclature. 2024年9月22日閲覧。 ^ Ralf Rabus1, Lars Wöhlbrand1, Daniela Thies2, Markus Meyer3, Barbara Reinhold-Hurek4 and Peter Kämpfer5 (1: Institute for Chemistry and Biology of the Marine Environment (ICBM), Carl von Ossietzky University Oldenburg, Carl-von-Ossietzky Str. 9-11, D-26111 Oldenburg, Germany. 2: Max Planck Institute for Marine Microbiology, Celsiusstraße 1, D-28359 Bremen, Germany. 3: Bruker Daltonik GmbH, Fahrenheitstr. 4, D-28359 Bremen, Germany. 4: Laboratory for General Microbiology, University Bremen, PO Box 330440, D-28334 Bremen, Germany. 5: Department for Applied Microbiology, Justus Liebig University, Heinrich-Buff-Ring 26-32, D-35392 Giessen, Germany.) (14 February 2019). “Aromatoleum gen. nov., a novel genus accommodating the phylogenetic lineage including Azoarcus evansii and related species, and proposal of Aromatoleum aromaticum sp. nov., Aromatoleum petrolei sp. nov., Aromatoleum bremense sp. nov., Aromatoleum toluolicum sp. nov. and Aromatoleum diolicum sp. nov.”. International Journal of Systematic and Evolutionary Microbiology 69 (4): 982-997. doi:10.1099/ijsem.0.003244. PMID 30762514.  ^ Aharon Oren1 and George M. Garrity2 (1: The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 9190401 Jerusalem, Israel. 2: Department of Microbiology and Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA) (01 July 2019). “Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 69, part 4 of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 69 (7): 1847-1849. doi:10.1099/ijsem.0.003433.  ^ Barbara Reinhold-Hurek1, Thomas Hurek2, Monique Gillis1, Bart Hoste1, Marc Vancanneyt1, Karel Kersters1 and Jozef De Ley1 (1: Laboratorium voor Microbiologie, Universiteit Gent, K.-L. Ledeganckstraat 35, B-9000 Ghent, Belgium. 2: Biozentrum der Universität, Abteilung Mikrobiologie, CH-4056 Basel, Switzerland) (01 July 1993). “Azoarcus gen. nov., Nitrogen-Fixing Proteobacteria Associated with Roots of Kallar Grass (Leptochloa fusca (L.) Kunth), and Description of Two Species, Azoarcus indigens sp. nov. and Azoarcus communis sp. nov.”. International Journal of Systematic and Evolutionary Microbiology 43 (3): 574-584. doi:10.1099/00207713-43-3-574.  ^ “Notification that New Names and New Combinations Have Appeared in Volume 43, No. 3, of the IJSB”. International Journal of Systematic and Evolutionary Microbiology 43 (4): 866. (01 October 1993). doi:10.1099/00207713-43-4-866.  ^ Ge-yi Fu1, Xiao-yun Yu2, Xiao-dong Yu3, Zhe Zhao3, Can Chen1, Rui-jun Wang1, Min Wu1,3 and Xin-qi Zhang4 (1: Ocean College, Zhejiang University, Zhoushan 316021, PR China. 2: Department of Clinical Laboratory, Zhejiang Provincial People's Hospital, People's Hospital of Hangzhou Medical College, Hangzhou, 310004, PR China. 3: College of Life Sciences, Zhejiang University, Hangzhou 310058, PR China. 4: College of Forestry and Biotechnology, Zhejiang Agricultural and Forestry University, Lin’an 311300, PR China) (18 March 2019). “Azoarcus pumilus sp. nov., isolated from seawater in Sanya, China”. International Journal of Systematic and Evolutionary Microbiology 69 (5): 1459-1464. doi:10.1099/ijsem.0.003341. PMID 30882295.  ^ Aharon Oren1 and George M. Garrity2 (1: The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 9190401 Jerusalem, Israel. 2: Department of Microbiology & Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA) (01 August 2019). “Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 69, part 5 of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 69 (8): 2177-2178. doi:10.1099/ijsem.0.003470.  ^ a b c d Zhaobin Huang 1 2, Renju Liu 3, Fenghua Chen 1, Qiliang Lai 3, Aharon Oren 4, Zongze Shao 3 (1: College of Oceanology and Food Science, Quanzhou Normal University, Quanzhou, China. 2: Key Laboratory of Inshore Resources Biotechnology (Quanzhou Normal University), Fujian Province University, Quanzhou, China. 3: Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources, Xiamen, China. 4: The Institute of Life Sciences, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Jerusalem, Israel.) (2021 Oct 20). “Nitrogeniibacter aestuarii sp. nov., a Novel Nitrogen-Fixing Bacterium Affiliated to the Family Zoogloeaceae and Phylogeny of the Family Zoogloeaceae Revisited”. Frontiers in Microbiology 12: 755908. doi:10.3389/fmicb.2021.755908. PMC 8565577. PMID 34745064. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8565577/.  ^ a b c d Aharon Oren1ORCID icon and George M. Garrity2 (1: The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 9190401 Jerusalem, Israel. 2: Department of Microbiology & Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA.) (02 February 2022). “Valid publication of new names and new combinations effectively published outside the IJSEM. Validation List no. 203”. International Journal of Systematic and Evolutionary Microbiology 72 (1): 5167. doi:10.1099/ijsem.0.005167.  ^ Orla-Jensen S (1909). “Die Hauptlinien des natürlichen Bakteriensystems”. Centralblatt f. Bakt. etc. II. Abt. 22: 305-346.  ^ Victor M Reyes-Umana 1, John D Coates 1 (29 September 2023). “A description of the genus Denitromonas nom. rev.: Denitromonas iodatirespirans sp. nov., a novel iodate-reducing bacterium, and two novel perchlorate-reducing bacteria, Denitromonas halophila and Denitromonas ohlonensis, isolated from San Francisco Bay intertidal mudflats”. Microbiology Spectrum 11 (5): e0091523. doi:10.1128/spectrum.00915-23. PMC 10581121. PMID 37772843. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10581121/.  ^ Aharon Oren and Markus Göker (1: The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 9190401 Jerusalem, Israel. 2: Leibniz Institute DSMZ – German Collection of Microorganisms and Cell Cultures, Inhoffenstrasse 7B, 38124 Braunschweig, Germany.) (03 June 2024). “Validation List no. 217. Valid publication of new names and new combinations effectively published outside the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 74 (5): 6275. doi:10.1099/ijsem.0.006275.  ^ Hu Liao1,2,3, Mingming Qu1, Xinyue Hou1, Xiaolan Lin1, Hu Li2, Chen-song Duan2,3 and Yun Tian1,4 (1: Key Laboratory of the Ministry of Education for Coastal and Wetland Ecosystems, School of Life Sciences, Xiamen University, Xiamen 361102, PR China. 2: Key Laboratory of Urban Environment and Health, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, PR China. 3: University of Chinese Academy of Sciences, Beijing, PR China 4State Key Laboratory of Marine Environmental Science, Xiamen University, Xiamen 361102, PR China.) (09 August 2021). “Nitrogeniibacter mangrovi gen. nov., sp. nov., a novel anaerobic and aerobic denitrifying betaproteobacterium and reclassification of Azoarcus pumilus as Aromatoleum pumilum comb. nov.”. 10.1099/ijsem.0.004946 71 (8): 5057. PMID 34369861.  ^ Aharon Oren, George M. Garrity (1: The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Campus, 9190401 Jerusalem, Israel. 2: Department of Microbiology & Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA.) (01 December 2021). “Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 71, part 8 of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 71 (11): 5057. doi:10.1099/ijsem.0.005057.  ^ Jeesun Chun1, Ji Young Kang1,2, Young Cheol Jung1 and Kwang Yeop Jahng1,3 (1: Department of Life Sciences, Chonbuk National University, Jeonju-si, 561-756, Republic of Korea. 2: Applied Microbiology Research Center, Bio-Materials Research Institute, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Jeongeup-si, 580-185, Republic of Korea. 3: Institute for Molecular Biology and Genetics, Chonbuk National University, Jeonju-si, 561-756, Republic of Korea.) (01 February 2016). “Niveibacterium umoris gen. nov., sp. nov., isolated from wetland freshwater”. International Journal of Systematic and Evolutionary Microbiology 66 (2): 997-1002. doi:10.1099/ijsem.0.000826. PMID 26643899.  ^ Aharon Oren1 and George M. Garrity2 (1 Department of Plant and Environmental Sciences, Institute of Life Sciences, The Hebrew University of Jerusalem, Jerusalem 91904, Israel ;2 Department of Microbiology & Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA) (01 May 2016). “Notification that new names of prokaryotes, new combinations, and new taxonomic opinions have appeared in volume 66, part 2, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 66 (5): 1916-1919. doi:10.1099/ijsem.0.001042.  ^ J. M. Macy1, S. Rech1, G. Auling2, M. Dorsch3, E. Stackebrandt3 and L. I. Sly3 (1: Department of Animal Science, University of California, Davis, Davis, California 95616. 2: Institut für Mikrobiologie, Universität Hannover, 3000 Hannover 1, Germany. 3: Centre for Bacterial Diversity and Identification, Department of Microbiology, The University of Queensland, Brisbane, Australia 4072.) (01 January 1993). “Thauera selenatis gen. nov., sp. nov., a Member of the Beta Subclass of Proteobacteria with a Novel Type of Anaerobic Respiration”. International Journal of Systematic and Evolutionary Microbiology 43 (1): 135-42. doi:10.1099/00207713-43-1-135. PMID 8427805.  ^ “Notification that New Names and New Combinations Have Appeared in IJSB”. International Journal of Systematic and Evolutionary Microbiology 43 (2): 399. (01 April 1993). doi:10.1099/00207713-43-2-399.  ^ HANS-JOACHIM ANDERS1, ANETTE KAETZKE1, PETER KÄMPFER2, WOLFGANG LUDWIG3 and GEORG FUCHS1,4 (1: Abteilung Angewandte Mikrobiologie und Mykologie, Universität Ulm, Ulm, Germany. 2: Fachgebiet Hygiene. Technische Universität Berlin, Berlin, Germany 3 Lehrstuhl für Mikrobiologie, Technische Universität München, Munich, Germany. 4: Lehrstuhl für Mikrobiologie, Institut für Biologie II, Universität Freiburg, Freiburg, Germany.) (01 April 1995). “Taxonomic Position of Aromatic-Degrading Denitrifying Pseudomonad Strains K 172 and KB 740 and Their Description as New Members of the Genera Thauera, as Thauera aromatica sp. nov., and Azoarcus, as Azoarcus evansii sp. nov., Respectively, Members of the Beta Subclass of the Proteobacteria”. International Journal of Systematic and Evolutionary Microbiology 45 (2): 327-33. doi:10.1099/00207713-45-2-327. PMID 7537067.  ^ “Notification that New Names and New Combinations Have Appeared in Volume 45, No. 2, of the IJSB”. International Journal of Systematic and Evolutionary Microbiology 45 (3). (01 July 1995). doi:10.1099/00207713-45-3-621.  ^ Bongkeun Song1, Lily Y. Young1 and Norberto J. Palleroni1 (1: Biotechnology Center for Agriculture and the Environment, Foran Hall, Rutgers University, Cook College, 59 Dudley Road, New Brunswick, NJ 08901—8520, USA.) (01 July 1998). “Identification of denitrifier strain T1 as Thauera aromatica and proposal for emendation of the genus Thauera definition”. International Journal of Systematic and Evolutionary Microbiology 48 (3): 889-94. doi:10.1099/00207713-48-3-889. PMID 9734042.  ^ “Notification that new names and new combinations have appeared in volume 48, part 3, of the IJSB”. International Journal of Systematic and Evolutionary Microbiology 48 (4): 1085-1087. (01 October 1998). doi:10.1099/00207713-48-4-1085.  ^ Yajie Yin 1, Yanan Wang 2, Wei Tang 1, Liyan Song 3 (1: Environmental Microbiology and Ecology Research Center, Chongqing Institute of Green and Intelligent Technology, Chinese Academy of Sciences, No. 266 Fangzheng Avenue, Shuitu Hi-tech Industrial Park, Shuitu Town, Beibei District, Chongqing, 400714, People's Republic of China. 2: Key Laboratory of Microbial Engineering at the Institute of Biology, Henan Academy of Sciences, Zhengzhou, 450008, People's Republic of China. 3: Environmental Microbiology and Ecology Research Center, Chongqing Institute of Green and Intelligent Technology, Chinese Academy of Sciences, No. 266 Fangzheng Avenue, Shuitu Hi-tech Industrial Park, Shuitu Town, Beibei District, Chongqing, 400714, People's Republic of China. (03 August 2017). “Thauera phenolivorans sp. nov., a phenol degrading bacterium isolated from activated sludge”. Antonie van Leeuwenhoek 110 (12): 1681–1690. doi:10.1007/s10482-017-0918-3. PMID 28776118.  ^ Aharon Oren1 and George M. Garrity2 (1: The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 9190401 Jerusalem, Israel. 2: Department of Microbiology and Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA.) (01 July 2018). “Notification of changes in taxonomic opinion previously published outside the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 68 (7): 2137-2138. doi:10.1099/ijsem.0.002830.  ^ Hang-Yeon Weon1, Byung-Yong Kim2, Seung-Hee Yoo2, Soon-Wo Kwon2, Seung-Joo Go2 and Erko Stackebrandt3 (1: Applied Microbiology Division, National Institute of Agricultural Science and Technology, Rural Development Administration (RDA), Suwon 441-707, Republic of Korea. 2: KACC-Korean Agricultural Culture Collection, Microbial Genetics Division, National Institute of Agricultural Biotechnology, RDA, Suwon 441-707, Republic of Korea. 3: DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH, Inhoffenstraße 7b, 38124 Braunschweig, Germany.) (01 January 2008). “Uliginosibacterium gangwonense gen. nov., sp. nov., isolated from a wetland, Yongneup, in Korea”. International Journal of Systematic and Evolutionary Microbiology 58 (1): 131-5. doi:10.1099/ijs.0.64567-0. PMID 18175697.  ^ “Notification that new names and new combinations have appeared in volume 58, part 1, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 58 (4): 747-748. (01 April 2008). doi:10.1099/ijs.0.2008/001446-0.  ^ Ji Young Kang 1, Jeesun Chun 2, Kwang Yeop Jahng 3 (1: Industrial Microbiology and Bioprocess Research Center, Korea Research Institute of Bioscience and Biotechnology, Jeongeup, 56212, Republic of Korea. 2: Department of Life Sciences, Chonbuk National University, Jeongeup, 54896, Republic of Korea. 3: Department of Life Sciences, Chonbuk National University, Jeongeup, 54896, Republic of Korea.) (28 July 2017). “Uliginosibacterium flavum sp. nov. isolated from an artificial lake”. Journal of Microbiology 55 (8): 595–599. doi:10.1007/s12275-017-7002-6. PMID 28752297.  ^ Aharon Oren1 and George M. Garrity2 (1: The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 9190401 Jerusalem, Israel. 2: Department of Microbiology and Molecular Genetics, Biomedical Physical Sciences, Michigan State University, East Lansing, MI 48824-4320, USA.) (01 January 2018). “Notification of changes in taxonomic opinion previously published outside the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 68 (1): 7-8. doi:10.1099/ijsem.0.002502.