カンピロバクター目

カンピロバクター目（－もく、Campylobacterales）は真正細菌Pseudomonadota門イプシロンプロテオバクテリア綱の目の一つである。 グラム陰性。種で最大のグループは微好気性生物である。 2006年に報告されたゲノムの比較解析により、カンピロバクター目のほぼすべての種に特有の49種類のタンパク質が特定された。加えて、2種の保存シグネチャーインデルが特定されており、これらは特有タンパク質とともに、目の分子マーカーとして利用できる。このインデルはUvr ABCエンドヌクレアーゼシステムのアミノ酸3個の挿入、及びフェニルアラニンtRNA合成酵素のアミノ酸2個の欠失である。 現在の分類体系はList of Prokaryotic names with Standing in Nomenclature（LPSN）とアメリカ国立生物工学情報センター（NCBI）により提供されている。 LTP_08_2023提供の16S rRNA遺伝子配列に基づく系統樹 GTDB 08-RS214提供の120個のマーカータンパク質のシングルコピー遺伝子配列に基づく系統樹 ^ a b Garrity GM, Bell JA, Lilburn T (2005). “Order I. Campylobacterales ord. nov.”. In Garrity, George M.; Brenner, Don J.; Krieg, Noel R.; Staley, James T. Bergey's Manual of Systematic Bacteriology, Volume Two: The Proteobacteria, Part C: The Alpha-, Beta-, Delta-, and Epsilonproteobacteria. Springer, New York. p. 1145  ^ a b “List of new names and new combinations previously effectively, but not validly, published”. International Journal of Systematic and Evolutionary Microbiology: 1-6. 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International Journal of Systematic and Evolutionary Microbiology 60 (9): 2016-2022. doi:10.1099/ijs.0.017152-0. PMID 19801389.  ^ “Notification that new names and new combinations have appeared in volume 60, part 9, of the IJSEM”. International Journal of Systematic and Evolutionary Microbiology 60 (12): 2695-2696. (01 December 2010). doi:10.1099/ijs.0.029710-0.  ^ a b c David W Waite, Inka Vanwonterghem, Christian Rinke, Donovan H Parks, Ying Zhang, Ken Takai, Stefan M Sievert, Jörg Simon, Barbara J Campbell, Thomas E Hanson, Tanja Woyke, Martin G Klotz, Philip Hugenholtz (24 April 2017). “Comparative Genomic Analysis of the Class Epsilonproteobacteria and Proposed Reclassification to Epsilonbacteraeota (phyl. nov.)”. Frontiers in Microbiology 8: 682. doi:10.3389/fmicb.2017.00682. PMC 5401914. PMID 28484436. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5401914/.  ^ a b Aharon Oren and George M. Garrity (29 May 2020). “List of new names and new combinations previously effectively, but not validly, published”. International Journal of Systematic and Evolutionary Microbiology 70 (5): 2960-2966. doi:10.1099/ijsem.0.004156.  ^ P. Vandamme and J. De Ley (01 July 1991). “Proposal for a New Family, Campylobacteraceae”. International Journal of Systematic and Evolutionary Microbiology 41 (3): 451-455. doi:10.1099/00207713-41-3-451.  ^ “Notification that New Names and New Combinations Have Appeared in the IJSB”. International Journal of Systematic and Evolutionary Microbiology 41 (4): 581. (01 October 1991). doi:10.1099/00207713-41-4-581.  ^ Garrity GM, Bell JA, Lilburn T (2005). “Family II. Helicobacteraceae fam. nov.”. In Garrity, George M.; Brenner, Don J.; Krieg, Noel R.; Staley, James T. Bergey's Manual of Systematic Bacteriology, Volume Two: The Proteobacteria, Part C: The Alpha-, Beta-, Delta-, and Epsilonproteobacteria. Springer, New York. p. 1168  ^ David W. Waite, Maria S. Chuvochina, Philip Hugenholtz (16 September 2019). “Road Map of the Phylum Campylobacterota”. Bergey's Manual of Systematics of Archaea and Bacteria. doi:10.1002/9781118960608.bm00040  ^ Adrien Assié, Nikolaus Leisch, Dimitri V Meier, Harald Gruber-Vodicka, Halina E Tegetmeyer, Anke Meyerdierks, Manuel Kleiner, Tjorven Hinzke, Samantha Joye, Matthew Saxton, Nicole Dubilier, Jillian M Petersen (27 September 2019). “Horizontal acquisition of a patchwork Calvin cycle by symbiotic and free-living Campylobacterota (formerly Epsilonproteobacteria)”. The ISME Journal 14 (1): 104–122. doi:10.1038/s41396-019-0508-7. PMC 6908604. PMID 31562384. https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6908604/.  ^ Aharon Oren and George M. Garrity (31 January 2022). “CANDIDATUS LIST No. 3. Lists of names of prokaryotic Candidatus taxa”. International Journal of Systematic and Evolutionary Microbiology 72 (1): 5186. doi:10.1099/ijsem.0.005186.  ^ a b Jean P. Euzéby, Aidan C. Parte. “Order Campylobacterales”. List of Prokaryotic names with Standing in Nomenclature (LPSN). 2024年7月22日閲覧。 ^ Sayers. “Campylobacterales”. National Center for Biotechnology Information (NCBI) taxonomy database. 2023年9月9日閲覧。 ^ “GTDB release 08-RS214”. Genome Taxonomy Database. 10 May 2023閲覧。 ^ “bac120_r214.sp_label”. Genome Taxonomy Database. 10 May 2023閲覧。 ^ “Taxon History”. Genome Taxonomy Database. 10 May 2023閲覧。 ^ “GTDB release 08-RS214”. Genome Taxonomy Database. 10 May 2023閲覧。 ^ “bac120_r214.sp_label”. Genome Taxonomy Database. 10 May 2023閲覧。 ^ “Taxon History”. Genome Taxonomy Database. 10 May 2023閲覧。