黄杆菌属

黄杆菌属（学名：Flavobacterium）為黄杆菌目黄杆菌科的一属好氧或兼性厌氧发酵型革兰氏阴性杆菌。直杆状，端圆。广泛分布在土壤和水中，在生肉、乳类和其他食物以及医院环境和人类的临床标本中都有检出。此属的模式种为水生黄杆菌(Flavobacterium aquatile)。 本属包括以下物种： Flavobacterium acidificum Steinhaus 1941 Flavobacterium aciduliphilum Kang et al. 2013 Flavobacterium acidurans Millar 1973 Flavobacterium aestivum Jo et al. 2023 Flavobacterium aquiphilum Jo et al. 2023 Flavobacterium ahnfeltiae Nedashkovskaya et al. 2015 栖阿卡亚黄杆菌 Flavobacterium akiainvivens Kuo et al. 2013 Flavobacterium album Baek et al. 2018 居藻黄杆菌 Flavobacterium algicola Miyashita et al. 2010 Flavobacterium algoritolerans Yin et al. 2023 碱土黄杆菌 Flavobacterium alkalisoli Xu et al. 2020 Flavobacterium alvei Lee and Jeon 2018 Flavobacterium amnicola Sheu et al. 2019 Flavobacterium amnigenum Patil et al. 2019 Flavobacterium amniphilum Sheu et al. 2017 安纳托利亚黄杆菌 Flavobacterium anatoliense Kacagan et al. 2013，异名 安徽黄杆菌 Flavobacterium anhuiense Liu et al. 2008 橙黄徽黄杆菌 Flavobacterium antarcticum Yi et al. 2005 Flavobacterium aquariorum Joung et al. 2020 Flavobacterium aquaticum Subhash et al. 2013 水生黄杆菌 Flavobacterium aquatile (Frankland and Frankland 1889) Bergey et al. 1923 Flavobacterium aquicola Hatayama et al. 2016 硬水黄杆菌 Flavobacterium aquidurense Cousin et al. 2007 Flavobacterium aquimarinum Kristyanto et al. 2018 Flavobacterium araucananum Kämpfer et al. 2012 Flavobacterium arcticum Li et al. 2017 Flavobacterium ardleyense Zhou et al. 2017 芳香黄杆菌 Flavobacterium aromatium Flavobacterium arsenatis Ao et al. 2014 Flavobacterium arsenitoxidans Khianngam et al. 2015 Flavobacterium artemisiae Zhao et al. 2018 Flavobacterium aurantiibacter Cai et al. 2018 Flavobacterium autothermophilum Goto et al. 1978 Flavobacterium azizsancarii Otur et al. 2023，以诺贝尔奖获得者阿齐兹·桑卡尔（Aziz Sancar）教授博士的名字命名 Flavobacterium azooxidireducens Behrendt et al. 2023 大比目鱼黄杆菌 Flavobacterium balustinum Harrison 1929，异名 Flavobacterium banpakuense Kim et al. 2011 北部湾黄杆菌 Flavobacterium beibuense Fu et al. 2011 Flavobacterium bizetiae Mühle et al. 2021 Flavobacterium bomense Liu et al. 2019，也拼作：Flavobacterium bomensis Flavobacterium branchiarum Zamora et al. 2016 Flavobacterium branchiicola Zamora et al. 2016 嗜枝黄杆菌 Flavobacterium branchiophilum Wakabayashi et al. 1989，嗜鳍黄杆菌，也拼作Flavobacterium branchiophila 短黄杆菌 Flavobacterium breve (ex Lustig 1890) Holmes and Owen 1982，异名 Flavobacterium brevivitae Chen et al. 2016 北京化工大学黄杆菌 Flavobacterium buctense Feng et al. 2016 淤泥黄杆菌 Flavobacterium caeni Liu et al. 2010 Flavobacterium capsulatum Leifson 1962，为Novosphingobium capsulatum (Leifson 1962) Takeuchi et al. 2001的异名 Flavobacterium caseinilyticum Chaudhary et al. 2020 Flavobacterium cauense Qu et al. 2009 Flavobacterium cellulosilyticum Chaudhary et al. 2020 Flavobacterium cerinum Zhang et al. 2019 鲸黄杆菌 Flavobacterium ceti Vela et al. 2007，为Myroides ceti (Vela et al. 2007) García-López et al. 2020的异名 Flavobacterium channae Kang et al. 2023 陈氏黄杆菌 Flavobacterium cheniae Qu et al. 2008，陈文新氏黄杆菌，以陈文新的名字命名 Flavobacterium cheonanense Lee et al. 2012 Flavobacterium cheongpyeongense Joung et al. 2019 Flavobacterium cheonhonense Lee et al. 2014 Flavobacterium chilense Kämpfer et al. 2012 Flavobacterium chryseum Králová et al. 2018 Flavobacterium chuncheonense Park et al. 2017 Flavobacterium chungangense Kim et al. 2009 Flavobacterium chungbukense Lim et al. 2011 忠南黄杆菌 Flavobacterium chungnamense Lee et al. 2012 Flavobacterium circumlabens Králová et al. 2019 Flavobacterium cloacae Liu et al. 2017，为Myroides cloacae (Liu et al. 2017) García-López et al. 2020的异名 柯林斯黄杆菌 Flavobacterium collinsense Zhang et al. 2016，指该菌种分离自南极柯林斯冰帽冰川 Flavobacterium collinsii Zamora et al. 2016 柱状黄杆菌 Flavobacterium columnare (Bernardet and Grimont 1989) Bernardet et al. 1996 Flavobacterium commune Ekwe and Kim 2018 Flavobacterium compostarboris Kim et al. 2012 Flavobacterium covae La Frentz et al. 2022，以已故Covadonga Rodriguez Arias博士的名字命名（别名“Cova”），以表彰她对柱状病的研究 Flavobacterium crassostreae Choi et al. 2017 Flavobacterium croceum Park et al. 2006 Flavobacterium crocinum Baek et al. 2018 黄瓜黄杆菌 Flavobacterium cucumis Weon et al. 2007 Flavobacterium cupreum Králová et al. 2019 Flavobacterium cutihirudinis Glaeser et al. 2013 Flavobacterium cyanobacteriorum Cai et al. 2018 Flavobacterium cyclinae Kang et al. 2023 大田黄杆菌 Flavobacterium daejeonense Kim et al. 2006 Flavobacterium daemonense Ngo et al. 2015，也拼作：Flavobacterium daemonensis 檀国黄杆菌 Flavobacterium dankookense Lee et al. 2012，种名指韩国檀国大学（Dankook University） Flavobacterium dasani Chaudhary et al. 2020 污水黄杆菌 Flavobacterium defluvii Park et al. 2007 哲拉什黄杆菌 Flavobacterium degerlachei Van Trappen et al. 2004，迪吉氏黄杆菌 脱氮黄杆菌 Flavobacterium denitrificans Horn et al. 2005 Flavobacterium devorans (Zimmermann 1890) Bergey et al. 1923，异名 Flavobacterium dispersum Chen et al. 2017 东滩黄杆菌 Flavobacterium dongtanense Xiao et al. 2011 Flavobacterium eburneipallidum Jo et al. 2023 Flavobacterium eburneum Hwang et al. 2017 Flavobacterium edaphi Chhetri et al. 2019 Flavobacterium effusum Chen et al. 2018 Flavobacterium endophyticum Gao et al. 2015 恩施黄杆菌 Flavobacterium enshiense Dong et al. 2013 Flavobacterium esteraromaticum (Omelianski 1923) Bergey et al. 1930，为Microbacterium esteraromaticum (Omelianski 1923) Takeuchi and Hatano 1998的异名 粪黄杆菌 Flavobacterium faecale Kim et al. 2014 酵米面黄杆菌 Flavobacterium farinofer-mentans Flavobacterium ferrugineum Sickles and Shaw 1934，异名 线形黄杆菌 Flavobacterium filum Ryu et al. 2007 Flavobacterium flaviflagrans Dahal et al. 2017 Flavobacterium flavigenum Jo et al. 2023 Flavobacterium frigoritolerans Yang et al. 2023 Flavobacterium flevense (van der Meulen et al. 1974) Bernardet et al. 1996 Flavobacterium fluminis Ahn et al. 2017 Flavobacterium fluviale Baek et al. 2020 Flavobacterium fluviatile Chen et al. 2018 Flavobacterium fluvii Lee et al. 2010 Flavobacterium foetidum Bu and Cha 2018 Flavobacterium fontis Chun et al. 2013 弱黄杆菌 Flavobacterium fragile Ran et al. 2024 冷水黄杆菌 Flavobacterium frigidarium Humphry et al. 2001，寒冷黄杆菌 冷海水黄杆菌 Flavobacterium frigidimaris Nogi et al. 2005 冷域黄杆菌 Flavobacterium frigoris Van Trappen et al. 2004 弗里克塞尔湖黄杆菌 Flavobacterium fryxellicola Van Trappen et al. 2005 Flavobacterium fulvum Nguyen and Kim 2016 Flavobacterium gelatinilyticum Jo et al. 2023 冰湖黄杆菌 Flavobacterium gelidilacus Van Trappen et al. 2003 Flavobacterium gillisiae McCammon and Bowman 2000 Flavobacterium gilvum Shin et al. 2017 人参土黄杆菌 Flavobacterium ginsengisoli Kim et al. 2013 转化人参皂苷黄杆菌 Flavobacterium ginsenosidimutans Yang et al. 2011 冰川黄杆菌 Flavobacterium glaciei Zhang et al. 2006 粘黄杆菌 Flavobacterium gleum Holmes et al. 1984，异名 大豆黄杆菌 Flavobacterium glycines Madhaiyan et al. 2010 Flavobacterium gondwanense Dobson et al. 1993，异名 Flavobacterium gossypii Kämpfer et al. 2017 细粒黄杆菌 Flavobacterium granuli Aslam et al. 2005 Flavobacterium gyeonganense Kim et al. 2014 Flavobacterium halmophilum Elazari-Volcani 1940，也拼作Flavobacterium halmephilium Flavobacterium hankyongi Liu et al. 2018 简浩然氏黄杆菌 Flavobacterium haoranii Zhang et al. 2010 华农黄杆菌 Flavobacterium hauense Dong et al. 2013，华农产黄细菌，种名指华中农业大学（HUA） 肝素黄杆菌 Flavobacterium heparinum Payza and Korn 1956，异名 哈茨山黄杆菌 Flavobacterium hercynium Cousin et al. 2007 冬天黄杆菌 Flavobacterium hibernum McCammon et al. 1998 Flavobacterium hibisci Moya et al. 2017 Flavobacterium hiemivividum Chaudhary et al. 2020 Flavobacterium humicola Nguyen and Kim 2016 湿土黄杆菌 Flavobacterium humidisoli Ra et al. 2023 匈牙利黄杆菌 Flavobacterium hungaricum Máté et al. 2023 水生黄杆菌 Flavobacterium hydatis Bernardet et al. 1996 Flavobacterium hydrophilum Joung et al. 2019 Flavobacterium ichthyis Chen et al. 2020 印度黄杆菌 Flavobacterium indicum Saha and Chakrabarti, 2006 产吲哚黄杆菌 Flavobacterium indologenes Yabuuchi et al. 1983，产吲哚金黄杆菌 Flavobacterium indoltheticum Campbell and Williams, 1951 Flavobacterium inkyongense Park et al. 2017 济州黄杆菌 Flavobacterium jejuense Park et al. 2016，也拼作：Flavobacterium jejuensis 约氏黄杆菌 Flavobacterium johnsoniae (Stanier 1947) Bernardet et al. 1996，约翰逊黄杆菌，也拼作：Flavobacterium johnsonae Flavobacterium jumunjinense Joung et al. 2013 Flavobacterium keumense Ekwe et al. 2017 Flavobacterium kingsejongi Choi et al. 2018 Flavobacterium knui Kim et al. 2019 朝鲜黄杆菌 Flavobacterium koreense Lee et al. 2012 Flavobacterium kyungheense Son et al. 2014，也拼作：Flavobacterium kyungheensis Flavobacterium lacicola Park et al. 2018 Flavobacterium lacisediminis Zhang et al. 2023 Flavobacterium lacunae Chen et al. 2017 湖黄杆菌 Flavobacterium lacus Li et al. 2014 Flavobacterium lacustre Jo et al. 2023 Flavobacterium laiguense Yang et al. 2019 Flavobacterium limi Moya et al. 2017 栖污泥黄杆菌 Flavobacterium limicola Tamaki et al. 2003 Flavobacterium limnophilum Jo et al. 2023 Flavobacterium limnosediminis Lee et al. 2013 耐林丹黄杆菌 Flavobacterium lindanitolerans Jit et al. 2008 滨海黄杆菌 Flavobacterium litorale Muhammad et al. 2022 亮黄杆菌 Flavobacterium luminosum Ran et al. 2024 Flavobacterium longum Fujii et al. 2014 Flavobacterium luteolum Jo et al. 2023 Flavobacterium luteum Park et al. 2017 解污泥黄杆菌 Flavobacterium luticocti Liu et al. 2017 活性污泥黄杆菌 Flavobacterium lutivivi Feng et al. 2016 Flavobacterium macacae Li et al. 2020 Flavobacterium macrobrachii Sheu et al. 2011 Flavobacterium magnum Baek et al. 2018 茅台黄杆菌 Flavobacterium maotaiense Feng et al. 2015 Flavobacterium marginilacus Jo et al. 2023 Flavobacterium marinotypicum ZoBell and Upham 1944，为Microbacterium maritypicum (ZoBell and Upham 1944) Takeuchi and Hatano 1998的异名 海黄杆菌 Flavobacterium marinum Song et al. 2013，为Myroides aquimaris García-López et al. 2020的异名 Flavobacterium maris Romanenko et al. 2016 脑膜炎黄杆菌 Flavobacterium meningosepticum King 1959，异名 Flavobacterium microcysteis Seo et al. 2020 密克罗黄杆菌 Flavobacterium micromati Van Trappen et al. 2004 噬果胶黄杆菌 Flavobacterium mizutaii (Yabuuchi et al. 1983) Holmes et al. 1988，异名，也称水氏黄杆菌、水生黄杆菌 Flavobacterium multivorum Holmes et al. 1981，为Sphingobacterium multivorum (Holmes et al. 1981) Yabuuchi et al. 1983的异名 Flavobacterium myungsuense Joung et al. 2012 Flavobacterium nackdongense Kim and Yu 2020 Flavobacterium naphthae Chaudhary and Kim 2018 Flavobacterium nitratireducens Nupur et al. 2013 Flavobacterium nitrogenifigens Kämpfer et al. 2015 Flavobacterium niveum Chen et al. 2019 难沉黄杆菌 Flavobacterium noncentrifugens Zhu et al. 2013，不聚中黄杆菌 三七黄杆菌 Flavobacterium notoginsengisoli Zhang et al. 2016 海泥黄杆菌 Flavobacterium oceanosedimentum Carty and Litchfield 1978 气味黄杆菌 Flavobacterium odoratum Stutzer 1929，为Flavobacterium Bergey et al. 1923的异名，也称芳香黄杆菌 芳香黄杆菌 Flavobacterium odoriferum Ran et al. 2024 Flavobacterium okayamense Kitahara et al. 2023 Flavobacterium okeanokoites ZoBell and Upham 1944，为Planococcus okeanokoites (ZoBell and Upham 1944) Nakagawa et al. 1996的异名 Flavobacterium olei Chaudhary and Kim 2017 广食黄杆菌 Flavobacterium omnivorum Zhu et al. 2003 Flavobacterium oncorhynchi Zamora et al. 2012 东方黄杆菌 Flavobacterium orientale Li et al. 2017 稻黄杆菌 Flavobacterium oryzae Chen et al. 2014 Flavobacterium ovatum Ren et al. 2018 Flavobacterium pallidum Baek et al. 2018 沼泽黄杆菌 Flavobacterium palustre Feng et al. 2015 Flavobacterium panacagri Kim et al. 2023 Flavobacterium panici Kämpfer et al. 2020 Flavobacterium paronense Joung et al. 2016 噬果胶黄杆菌 Flavobacterium pectinovorum (Reichenbach 1989) Bernardet et al. 1996 Flavobacterium pedocola Nguyen and Kim 2016 Flavobacterium phocarum Zhou et al. 2018 芦苇黄杆菌 Flavobacterium phragmitis Liu et al. 2011 Flavobacterium piscinae Chen et al. 2019 双鱼黄杆菌 Flavobacterium piscis Zamora et al. 2014 Flavobacterium plurextorum Zamora et al. 2014 海黄杆菌 Flavobacterium ponti Yoon et al. 2011，海洋黄杆菌 Flavobacterium potami Li et al. 2023 鄱阳黄杆菌 Flavobacterium poyangense Li et al. 2024 Flavobacterium praedii Jo et al. 2023 长黄杆菌 Flavobacterium procerum Feng et al. 2015 深海黄杆菌 Flavobacterium profundi Wang et al. 2020 嗜冷水生黄杆菌 Flavobacterium psychraquaticum Avendaño-Herrera et al. 2024 冷湖黄杆菌 Flavobacterium psychrolimnae Van Trappen et al. 2005 Flavobacterium psychrophilum (Bernardet and Grimont 1989) Bernardet et al. 1996 Flavobacterium psychroterrae Králová et al. 2018 Flavobacterium psychrotrophum Kim et al. 2023 Flavobacterium psychrotolerans Yang et al. 2020 Flavobacterium pygoscelis Irgang et al. 2023 羌塘黄杆菌 Flavobacterium qiangtangense Huang et al. 2015，也拼作：Flavobacterium qiangtangensis Flavobacterium quisquiliarum Zhang et al. 2017 Flavobacterium rakeshii Kaur et al. 2012 然乌黄杆菌 Flavobacterium ranwuense Zhang et al. 2019 雷氏黄杆菌 Flavobacterium reichenbachii Ali et al. 2009，赖欣巴哈氏黄杆菌 Flavobacterium resinovorum Delaporte and Daste 1956，为Novosphingobium resinovorum (Delaporte and Daste 1956) Lim et al. 2007的异名 耐抗黄杆菌 Flavobacterium resistens Ryu et al. 2008 Flavobacterium restrictum Zhang et al. 2020 Flavobacterium rhamnosiphilum Zhang et al. 2020 Flavobacterium riviphilum Sheu et al. 2018 小河黄杆菌 Flavobacterium rivuli Ali et al. 2009 嗜糖黄杆菌 Flavobacterium saccharophilum (Reichenbach 1989) Bernardet et al. 1996 Flavobacterium salegens Dobson et al. 1993，为Salegentibacter salegens (Dobson et al. 1993) McCammon and Bowman 2000的异名 盐湖黄杆菌 Flavobacterium salilacus Debnath et al. 2020 盐湖黄杆菌高地亚种 Flavobacterium salilacus altitudinum 盐帽黄杆菌 Flavobacterium saliperosum Wang et al. 2006 Flavobacterium salmonis Kämpfer et al. 2020 Flavobacterium sandaracinum Chaudhary et al. 2020 沙上黄杆菌 Flavobacterium sasangense Yoon et al. 2009 Flavobacterium scophthalmum Mudarris et al. 1994，为Chryseobacterium scophthalmum (Mudarris et al. 1994) Vandamme et al. 1994的异名 居沉积物黄杆菌 Flavobacterium sedimenticola Wu et al. 2023 海滨沉积物黄杆菌 Flavobacterium sediminilitoris Park et al. 2018 沉积物黄杆菌 Flavobacterium sediminis Bae et al. 2018 泥土黄杆菌 Flavobacterium segetis Yi et Chun, 2006 首尔黄杆菌 Flavobacterium seoulense Shin et al. 2015 Flavobacterium sharifuzzamanii Debnath et al. 2019 施氏黄杆菌 Flavobacterium shii Yang et al. 2023，以地理学家和冰川学家、中国冰川学创始人施雅风教授的名字命名 Flavobacterium silvisoli Chaudhary et al. 2019 中华耐冷黄杆菌 Flavobacterium sinopsychrotolerans Xu et al. 2011 土壤黄杆菌 Flavobacterium soli Yoon et al. 2006 大豆黄杆菌 Flavobacterium soyae Zhao et al. 2022 昭阳湖黄杆菌 Flavobacterium soyangense Nam et al. 2017 Flavobacterium spartansii Loch and Faisal 2014 Flavobacterium spiritivorum Holmes et al. 1982，为Sphingobacterium spiritivorum (Holmes et al. 1982) Yabuuchi et al. 1983的异名 Flavobacterium squillarum Sheu et al. 2013 Flavobacterium stagni Chen et al. 2019 碱蓬黄杆菌 Flavobacterium suaedae Sun et al. 2016 下萨克森州黄杆菌 Flavobacterium subsaxonicum Ali et al. 2009 琥珀酸黄杆菌 Flavobacterium succinicans (Reichenbach 1989) Bernardet et al. 1996，琥珀黄杆菌 Flavobacterium sufflavum Chen et al. 2019 顺天黄杆菌 Flavobacterium suncheonense Kim et al. 2006 Flavobacterium supellecticarium Lin et al. 2020 苏州黄杆菌 Flavobacterium suzhouense Zhang et al. 2015 Flavobacterium swingsii Ali et al. 2009，以比利时著名微生物学家、世界文化收藏联合会前主席Jean Swings的名字命名 太湖黄杆菌 Flavobacterium taihuense Yang et al. 2022 Flavobacterium tangerina Li et al. 2020 Flavobacterium tangerinum Li et al. 2020 栖菌垫黄杆菌 Flavobacterium tegetincola McCammon and Bowman 2000 Flavobacterium terrae Weon et al. 2007 Flavobacterium terrigena Yoon et al. 2007 Flavobacterium terriphilum Zhang et al. 2016 Flavobacterium thalpophilum Holmes et al. 1983 热黄杆菌 Flavobacterium thermophilum Loginova and Egorova 1982 天格尔黄杆菌 Flavobacterium tiangeerense Xin et al. 2009 西藏黄杆菌 Flavobacterium tibetense Phurbu et al. 2019 Flavobacterium tilapiae Chen et al. 2013 Flavobacterium tistrianum Suwannachart et al. 2016 Flavobacterium tructae Zamora et al. 2014 Flavobacterium tyrosinilyticum Du and Yi 2016 Flavobacterium uliginosum ZoBell and Upham 1944，为Zobellia uliginosa (ZoBell and Upham 1944) Barbeyron et al. 2001的异名 Flavobacterium ummariense Lata et al. 2012 Flavobacterium ureilyticum Dahal and Kim 2019 Flavobacterium urocaniciphilum Fujii et al. 2014 乌鲁木齐黄杆菌 Flavobacterium urumqiense Dong et al. 2012 Flavobacterium ustbae Liu et al. 2019 Flavobacterium verecundum Sheu et al. 2016 Flavobacterium vireti Singh et al. 2015 Flavobacterium viscosum Li et al. 2020，也拼作：Flavobacterium viscosus 威弗半岛黄杆菌 Flavobacterium weaverense Yi and Chun 2006 黄色黄杆菌 Flavobacterium xanthum (ex Inoue and Komagata 1976) McCammon and Bowman 2000 新疆黄杆菌 Flavobacterium xinjiangense Zhu et al. 2003 雪山黄杆菌 Flavobacterium xueshanense Dong et al. 2012 藪内氏黄杆菌 Flavobacterium yabuuchiae Holmes et al. 1988，为Sphingobacterium spiritivorum (Holmes et al. 1982) Yabuuchi et al. 1983的异名 Flavobacterium yafengii Yin et al. 2023 盐城黄杆菌 Flavobacterium yanchengense Hu et al. 2013 龙仁黄杆菌 Flavobacterium yonginense Joung et al. 2012 Flavobacterium zepuense Zhang et al. 2020 摘箬山黄杆菌 Flavobacterium zhairuonense Debnath et al. 2020，也拼作Flavobacterium zhairuonensis Flavobacterium Bergey et al., 1923. 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