腸桿菌科

腸桿菌科（学名：Enterobacteriaceae）是γ-变形菌纲肠杆菌目的一科，为格蘭氏陰性菌中的一個類群，皆為桿菌。它們普遍存在於動物體腸道、水、土壤、寄生蟲等。其中，大腸桿菌是被研究最多的一种。 至少有63个已确认的属，如下（括号内为发表年份）： 交替球菌属 Alterococcus (1999) 杀雄菌属 Arsenophonus (1991) Brenneria (1999) 巴克纳氏菌属 Buchnera (1991) 布戴约维采菌属 Budvicia (1985) 布丘氏菌属 Buttiauxella (1982) 西地西菌属 Cedecea (1981) 柠檬酸杆菌属 Citrobacter (1932) Cosenzaea (2011) 克洛诺菌属 Cronobacter (2008) Dickeya (2005) Dryocola Maddock et al. 2023 Dryocola boscaweniae Maddock et al. 2023 Dryocola clanedunensis Maddock et al. 2023 爱德华氏菌属 Edwardsiella (1965) Enterobacillus Patil et al. 2015 Enterobacillus tribolii Patil et al. 2015 腸桿菌属 Enterobacter (1960) 欧文氏菌属 Erwinia (1920) 埃希氏菌属 Escherichia (1919) 爱文氏菌属 Ewingella (1984) Franconibacter (2014) Frischella Engel et al., 2013 Frischella japonica Frischella perrara Engel et al., 2013 Gibbsiella Brady et al., 2011 Gibbsiella acetica Geider et al. 2015 Gibbsiella dentisursi Saito et al. 2013 Gibbsiella greigii Brady et al. 2015 Gibbsiella papilionis Kim et al. 2013 Gibbsiella quercinecans Brady et al. 2011 哈夫尼菌属 Hafnia (1954) 华西菌属 Huaxiibacter He et al. 2022 中国华西菌 Huaxiibacter chinensis He et al. 2022 Izhakiella (2016) 小坂菌属 Kosakonia (2013) 克雷伯氏菌属 Klebsiella (1885) 克吕沃尔氏菌属 Kluyvera (1981) 勒克氏菌属 Leclercia (1987) Lelliottia Brady et al. 2013 Lelliottia amnigena (Izard et al. 1981) Brady et al. 2013 Lelliottia aquatilis Kämpfer et al. 2018 Lelliottia jeotgali Yuk et al. 2018 Lelliottia nimipressuralis (Carter 1945) Brady et al. 2013 Lelliottia steviae Lin et al. 2022 勒米诺氏菌属 Leminorella Hickman-Brenner et al. 1985 莱文氏菌属 Levinea Young et al. 1971 Limnobaculum Baek et al. 2019 Limnobaculum allomyrinae (Lee et al. 2021) Li et al. 2023 Limnobaculum eriocheiris Li et al. 2023 Limnobaculum parvum Baek et al. 2019 Limnobaculum xujianqingii (Ge et al. 2021) Li et al. 2023 Limnobaculum zhutongyuii (Ge et al. 2021) Li et al. 2023 Lonsdalea Brady et al. 2012 Lonsdalea britannica (Brady et al. 2012) Li et al. 2017 Lonsdalea iberica (Brady et al. 2012) Li et al. 2017 Lonsdalea populi (Tóth et al. 2013) Li et al. 2017 Lonsdalea quercina (Hildebrand and Schroth 1967) Brady et al. 2012 曼格洛杆菌属 Mangrovibacter Rameshkumar et al. 2010 Mangrovibacter phragmitis Behera et al. 2017 Mangrovibacter plantisponsor Rameshkumar et al. 2010 宜兴曼格洛杆菌 Mangrovibacter yixingensis Zhang et al. 2015 米勒氏菌属 Moellerella (1984) 摩根氏菌属 Morganella (1943) 肥杆菌属 Obesumbacterium (1963) 泛菌属 Pantoea (1989) 坚固杆菌属 Pectobacterium (1945) Phaseolibacter Halpern et al. 2013 Phaseolibacter flectens (Johnson 1956) Halpern et al. 2013 光杆状菌属 Photorhabdus (1993) Phytobacter Zhang et al. 2017 Phytobacter diazotrophicus Zhang et al. 2017 Phytobacter massiliensis (agier et al. 2014) Ma et al. 2021* Phytobacter palmae Madhaiyan et al. 2020 Phytobacter ursingii' Pillonetto et al. 2018 邻单胞菌属 Plesiomonas (1962) Pluralibacter Brady et al. 2013 Pluralibacter gergoviae (Brenner et al. 1980) Brady et al. 2013 Pluralibacter pyrinus (Chung et al. 1993) Brady et al. 2013 布拉格菌属 Pragia Aldová et al. 1988 变形杆菌属 Proteus Hauser 1885 普罗威登斯菌属 Providencia (1962) Pseudocitrobacter Kämpfer et al., 2014 Pseudocitrobacter anthropi Kämpfer et al., 2014 Pseudocitrobacter corydidari Guzman et al. 2022 Pseudocitrobacter faecalis Kämpfer et al., 2014 Pseudocitrobacter vendiensis Kämpfer et al. 2020 假单胞菌属 Pseudomonas (1894) 拉恩氏菌属 Rahnella (1981) 拉乌尔菌属 Raoultella (2001) Rosenbergiella Halpern et al. 2013 Rosenbergiella australiborealis Lenaerts et al. 2017，也拼作：Rosenbergiella australoborealis Rosenbergiella collisarenosi Lenaerts et al. 2017 Rosenbergiella epipactidis Lenaerts et al. 2017 Rosenbergiella epipactidis californiensis Álvarez-Pérez et al. 2023 Rosenbergiella epipactidis epipactidis Álvarez-Pérez et al. 2023 Rosenbergiella epipactidis japonicus Álvarez-Pérez et al. 2023 Rosenbergiella gaditana Álvarez-Pérez et al. 2023 Rosenbergiella metrosideri Álvarez-Pérez et al. 2023 Rosenbergiella nectarea Halpern et al. 2013 Rosenbergiella nectarea apis Álvarez-Pérez et al. 2023 Rosenbergiella nectarea nectarea Álvarez-Pérez et al. 2023 Rouxiella (2015) 糖杆菌属 Saccharobacter (1990) 沙门氏菌属 Salmonella (1990) Samsonia Sutra et al. 2001 Samsonia erythrinae Sutra et al. 2001 沙雷氏菌属 Serratia Bizio 1823 志贺氏菌属 Shigella Castellani and Chalmers, 1919 Shimwellia Priest and Barker 2010，本属以第一个分离出本菌种的J. L. Shimwell的名字命名 Shimwellia blattae (Burgess et al. 1973) Priest and Barker 2010 Shimwellia pseudoproteus Priest and Barker 2010 干燥杆菌属 Siccibacter Stephan et al. 2014 Silvania Maddock et al. 2023 Silvania confinis Maddock et al. 2023 Silvania hatchlandensis Maddock et al. 2023 Sodalis Dale and Maudlin 1999 Sodalis baculum Santos-Garcia et al. 2017 Sodalis glossinidius Dale and Maudlin 1999 Sodalis ligni Tláskal et al. 2023 Sodalis melophagi Chrudimský et al. 2012 Sodalis pierantonianus Oakeson et al. 2014，也拼作：Sodalis pierantonius或Sodalis pierantonii Sodalis praecaptivus Chari et al. 2015 塔特姆氏菌属 Tatumella (1982) Thorsellia Kämpfer et al. 2006 Thorsellia anophelis Kämpfer et al. 2006 Thorsellia kandunguensis Kämpfer et al. 2015 Thorsellia kenyensis Kämpfer et al. 2015 特拉布斯氏菌属 Trabulsiella (1992) 威格尔斯沃思氏菌属 Wigglesworthia (1995) 致病杆菌属 Xenorhabdus (1979) 耶尔辛氏菌属 Yersinia (1944) 预研菌属 Yokenella (1985) List of genera included in families - Enterobacteriaceae. List of Prokaryotic Names with Standing in Nomenclature. [26 June 2016]. （原始内容存档于2018-10-25）.  Maddock D, Brady C, Denman S, Arnold D. Description of Dryocola gen. nov. and two novel species, Dryocola boscaweniae sp. nov. and Dryocola clanedunensis sp. nov. isolated from the rhizosphere of native British oaks. Syst Appl Microbiol 2023; 46:126399. 我国感染性疾病研究团队发现新的细菌菌属. 人民融媒体. [2024-05-16].  He Y, Wu S, Feng Y, Zong Z. Huaxiibacter chinensis gen. nov., sp. nov., recovered from human sputum. Int J Syst Evol Microbiol 2022; 72:5484. Guzman J, Poehlein A, Glaeser SP, Schwengers O, Blom J, Hollensteiner J, Kampfer P, Vilcinskas A. Pseudocitrobacter corydidari sp. nov., isolated from the Asian emerald cockroach Corydidarum magnifica. Int J Syst Evol Microbiol 2022; 72:5497. Kampfer P, Fuglsang-Damgaard D, Overballe-Petersen S, Hasman H, Hammerum AM, Fuursted K, Blom J, Glaeser SP, Hansen F. Taxonomic reassessment of the genus Pseudocitrobacter using whole genome sequencing: Pseudocitrobacter anthropi is a later heterotypic synonym of Pseudocitrobacter faecalis and description of Pseudocitrobacter vendiensis sp. nov. Int J Syst Evol Microbiol 2020; 70:1315-1320. Alvarez-Perez S, de Vega C, Vanoirbeek K, Tsuji K, Jacquemyn H, Fukami T, Michiels C, Lievens B. Phylogenomic analysis of the genus Rosenbergiella and description of Rosenbergiella gaditana sp. nov., Rosenbergiella metrosideri sp. nov., Rosenbergiella epipactidis subsp. epipactidis subsp. nov., Rosenbergiella epipactidis subsp. californiensis subsp. nov., Rosenbergiella epipactidis subsp. japonicus subsp. nov., Rosenbergiella nectarea subsp. nectarea subsp. nov. and Rosenbergiella nectarea subsp. apis subsp. nov., isolated from floral nectar and insects. Int J Syst Evol Microbiol 2023; 73:5777. Maddock D, Arnold D, Denman S, Brady C. Description of a novel species of Leclercia, Leclercia tamurae sp. nov. and proposal of a novel genus Silvania gen. nov. containing two novel species Silvania hatchlandensis sp. nov. and Silvania confinis sp. nov. isolated from the rhizosphere of oak. BMC Microbiol 2022; 22:289.