Add a note about overwritewebroot when using system cron

If the current webroot does not match the webroot from the config,
and system cron is used, the URL generator fails to build valid URLs.
So we notify the admin to set it up correctly.

Fix #9995 

@DeepDiver1975 @PVince81  @MorrisJobke 

Related to #9494
Changed the comment and structure