GitHub PullRequestReviewCommentEvent at 2014-06-19 14:44:16
Repository: ni-o
Actor: nicholsn
Payload: {"action":"created","comment":{"url":"https://api.github.com/repos/ni-/ni-o/pulls/comments/13971325","id":13971325,"diff_hunk":"@@ -1,449 +1,1080 @@\n+@prefix fsl: <http://www.incf.org/ns/nidash/fsl#> .\n+@prefix iao: <http://purl.obolibrary.org/obo/iao.owl#> .\n @prefix nidm: <http://www.incf.org/ns/nidash/nidm#> .\n+@prefix owl: <http://www.w3.org/2002/07/owl#> .\n @prefix prov: <http://www.w3.org/ns/prov#> .\n @prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .\n @prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .\n+@prefix spm: <http://www.incf.org/ns/nidash/spm#> .\n @prefix xml: <http://www.w3.org/XML/1998/namespace> .\n @prefix xsd: <http://www.w3.org/2001/XMLSchema#> .\n \n-nidm:CenterOfGravity a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n+fsl:CenterOfGravity a owl:Class ;\n+    iao:IAO_0000112 \"\"\"entity(niiri:center_of_gravity_1,\n+        [prov:type = 'fsl:centerOfGravity',\n+        prov:label = \"Center of gravity 1\",\n+        prov:location = 'niiri:COG_coordinate_0001'])\"\"\" ;\n+    iao:IAO_0000116 \"\"\"BIRNLex or \n+NIDM Concept ID: fsl_102. \"\"\" ;\n+    rdfs:seeAlso \"http://fsl.fmrib.ox.ac.uk/fsl/fslwiki/Cluster\" ;\n     rdfs:subClassOf prov:Entity ;\n     prov:definition \"Centre Of Gravity for the cluster, equivalent to the concept of Centre Of Gravity for a object with distributed mass, where intensity substitutes for mass in this case (definition from http://fsl.fmrib.ox.ac.uk/fsl/fslwiki/Cluster)\" .\n \n-nidm:ClusterStatistic a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n+fsl:ZStatisticMap a owl:Class ;\n+    iao:IAO_0000112 \"\"\"entity(niiri:z_statistical_map_id,\n+        [prov:type = 'nidm:statisticalMap',\n+        prov:type = 'fsl:ZStatisticalMap',\n+        prov:location = \"file:///path/to/tstat1.nii.gz\" %% xsd:anyURI,\n+        prov:label = \"Z-statistical Map: listening &gt; rest: zstat1\",\n+        nidm:contrastName = \"listening &gt; rest\" %% xsd:string,\n+        nidm:originalFileName = \"zstat1.nii.gz\" %% xsd:string,\n+        nidm:atCoordinateSpace = 'niiri:coordinate_space_id_1',\n+        crypto:sha = \"400a2f07d99ed9be06577e6ecc89222cf4b688c654bc89067da558e88b73b97dd1b25e6c98f2a735fa0a1409598cff7e6025bda55abb6b9f5ef65d8d307eeba8\"])\n+\"\"\" ;\n     rdfs:subClassOf prov:Entity ;\n-    prov:definition \"Statistic defined at the cluster-level in an excusion set. In SPM it is defined as the cluster size. \" .\n+    prov:definition \"A map whose value at each location is a Z-statistic value. \" .\n \n-nidm:ConjunctionInference a <http://www.w3.org/2002/07/owl#Class>,\n+nidm:ConjunctionInference a owl:Class ;\n+    iao:IAO_0000116 \"\"\"Range: - not found. BIRNLex or \n+NIDM Concept ID: nidm_8. \"\"\" ;\n+    rdfs:subClassOf nidm:Inference,\n         prov:Activity ;\n-    rdfs:subClassOf prov:Activity ;\n     prov:definition \"Inference testing for the joint significance of all effects.\" .\n \n-nidm:ContrastEstimation a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Activity ;\n+nidm:ContrastEstimation a owl:Class ;\n+    iao:IAO_0000112 \"\"\"activity(niiri:contrast_estimation_id,\n+    [prov:type = 'nidm:ContrastEstimation',\n+    prov:label = \"Contrast estimation\"])\"\"\" ;\n+    iao:IAO_0000116 \"\"\"Range: - not found. BIRNLex or \n+NIDM Concept ID: nidm_9. \"\"\" ;\n     rdfs:subClassOf prov:Activity ;\n     prov:definition \"The process of estimating a contrast from the estimated parameters of statistical model.\" .\n \n-nidm:ContrastMap a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n-    rdfs:subClassOf prov:Entity ;\n-    prov:definition \"A map whose value at each location is statistical contrast estimate.\" .\n-\n-nidm:ContrastStandardErrorMap a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n+nidm:ContrastStandardErrorMap a owl:Class ;\n+    iao:IAO_0000112 \"\"\"entity(niiri:contrast_standard_error_map_id,\n+    [prov:type = 'nidm:ContrastStandardErrorMap',\n+    prov:location = \"file:///path/to/contrastSE.nii\" %% xsd:anyURI,\n+    prov:label = \"Contrast Standard Error Map\" %% xsd:string,\n+    nidm:originalFileName = \"contrastSE.nii\" %% xsd:string,\n+    nidm:coordinateSpace = 'niiri:coordinate_space_id_1',\n+    crypto:sha512 = \"e43b6e01b0463fe7d40782137867a...\" %% xsd:string])\"\"\" ;\n+    iao:IAO_0000116 \"\"\"BIRNLex or \n+NIDM Concept ID: nidm_12. \"\"\" ;\n     rdfs:subClassOf prov:Entity ;\n     prov:definition \"A map whose value at each location is the standard error of a given contrast.\" .\n \n-nidm:ContrastWeights a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n+nidm:ContrastWeights a owl:Class ;\n+    iao:IAO_0000112 \"\"\"\"entity(niiri:t_contrast_id,\n+    [prov:type = 'nidm:TContrastWeights',\n+    nidm:contrastName = \"\"listening > rest\"\" %% xsd:string,\n+    prov:label = \"\"Contrast: Listening > Rest\"\" %% xsd:string,\n+    prov:value = \"\"[1, 0, 0]\"\" %% xsd:string])\\\"\"\"\" ;\n+    iao:IAO_0000116 \"\"\"Range: Vectorofintegers not found. BIRNLex or \n+NIDM Concept ID: nidm_13. \"\"\" ;\n     rdfs:subClassOf prov:Entity ;\n     prov:definition \"Vector defining the linear combination associated with a particular contrast. \" .\n \n-nidm:Coordinate a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n-    rdfs:subClassOf prov:Entity ;\n-    prov:definition \"A point in N-dimensional space where the dimensions could be arbitrary.\" .\n-\n-nidm:CoordinateSpace a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n-    rdfs:subClassOf prov:Entity ;\n-    prov:definition \"An entity with spatial attributes (e.g., dimensions, units, and voxel-to-world mapping) that provides context to a SpatialImage (e.g., a StatisticMap).\" .\n-\n-nidm:CustomMaskMap a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n+nidm:CustomMaskMap a owl:Class ;\n+    iao:IAO_0000112 \"\"\"entity(niiri:mask_id_1,\n+      [prov:type = 'nidm:CustomMaskMap',\n+      prov:location = \"file:///path/to/custom_mask.nii\" %% xsd:anyURI,\n+      prov:label = \"Custom mask\" %% xsd:string,\n+      nidm:originalFileName = \"custom_mask.nii\" %% xsd:string,\n+      nidm:atCoordinateSpace = 'niiri:coordinate_space_id_1',\n+      crypto:sha512 = \"e43b6e01b0463fe7d40782137867a...\" %% xsd:string])\"\"\" ;\n+    iao:IAO_0000116 \"\"\"BIRNLex or \n+NIDM Concept ID: nidm_99. \"\"\" ;\n     rdfs:subClassOf prov:Entity ;\n     prov:definition \"mask defined by the user to restrain the space in which model fitting is performed.\" .\n \n-nidm:Data a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n-    rdfs:subClassOf prov:Entity ;\n-    prov:definition \"\\\"A collection or single item of factual information, derived from measurement or research, from which conclusions may be drawn.\\\"\" .\n-\n-nidm:DesignMatrix a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n-    rdfs:subClassOf prov:Entity ;\n-    prov:definition \"A matrix of values defining the explanatory variables used in a regression model.  Each column corresponds to one explanatory variable, each row corresponds to one observation.\" .\n-\n-nidm:ExcursionSet a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n-    rdfs:subClassOf prov:Entity ;\n-    prov:definition \"Set of map elements surviving a thresholding procedure.\" .\n-\n-nidm:ExtentThreshold a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n-    rdfs:subClassOf prov:Entity ;\n-    prov:definition \"\"\"A numerical value that establishes a bound on a range of cluster-sizes. / [from extentThresh:]        Minimum cluster size used when thresholding a statistic image        5voxels\n-\"\"\" .\n-\n-nidm:FContrastWeights a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n-    rdfs:subClassOf prov:Entity ;\n-    prov:definition \"Contrast based on an F-statistic.\" .\n-\n-nidm:FStatisticMap a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n-    rdfs:subClassOf prov:Entity ;\n+nidm:FSL a owl:Class ;\n+    iao:IAO_0000116 \"\"\"BIRNLex or \n+NIDM Concept ID: nidm_57. \"\"\" ;\n+    rdfs:seeAlso \"http://fsl.fmrib.ox.ac.uk\" ;\n+    rdfs:subClassOf prov:Agent,\n+        prov:SoftwareAgent ;\n+    prov:definition \"FMRIB Software Library software package for the analysis of neuroimaging data from the FMRIB.\" .\n+\n+nidm:FStatisticMap a owl:Class ;\n+    iao:IAO_0000116 \"\"\"Parent: nidm:StatisticMap not found. BIRNLex or \n+NIDM Concept ID: nidm_33. \"\"\" ;\n+    rdfs:subClassOf prov:Entity,\n+        \"nidm:StatisticMap\" ;\n     prov:definition \"A map whose value at each location is an F-statistic. \" .\n \n-nidm:HeightThreshold a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n-    rdfs:subClassOf prov:Entity ;\n-    prov:definition \"\"\"A numerical value that establishes a bound on a range of voxelwise or vertex-wise defined statistic.\n-\"\"\" .\n-\n-nidm:Inference a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Activity ;\n-    rdfs:subClassOf prov:Activity ;\n-    prov:definition \"The process of inferring the excursion set from a statistical map.\" .\n-\n-nidm:InferenceOneTailed a <http://www.w3.org/2002/07/owl#Class>,\n+nidm:InferenceOneTailed a owl:Class ;\n+    iao:IAO_0000112 \"\"\"activity(niiri:inference_id,\n+    [prov:type = 'nidm:InferenceOneTailed',\n+    prov:label = \"Inference\"])\"\"\" ;\n+    iao:IAO_0000116 \"\"\"BIRNLex or \n+NIDM Concept ID: nidm_36. \"\"\" ;\n+    rdfs:seeAlso \"http://www.investopedia.com/terms/o/one-tailed-test.asp\" ;\n+    rdfs:subClassOf nidm:Inference,\n         prov:Activity ;\n-    rdfs:subClassOf prov:Activity ;\n     prov:definition \"Inference in which the critical area of a distribution is one-sided so that it is either greater than or less than a certain value, but not both. (from \\\"one-tailed test\\\" in investopedia)\" .\n \n-nidm:InferenceTwoTailed a <http://www.w3.org/2002/07/owl#Class>,\n+nidm:InferenceTwoTailed a owl:Class ;\n+    iao:IAO_0000112 \"\"\"activity(niiri:inference_id,\n+    [prov:type = 'nidm:InferenceTwoTailed',\n+    prov:label = \"Inference\"])\"\"\" ;\n+    iao:IAO_0000116 \"\"\"BIRNLex or \n+NIDM Concept ID: nidm_37. \"\"\" ;\n+    rdfs:seeAlso \"http://www.investopedia.com/terms/t/two-tailed-test.asp\" ;\n+    rdfs:subClassOf nidm:Inference,\n         prov:Activity ;\n-    rdfs:subClassOf prov:Activity ;\n     prov:definition \"Inference in which the critical area of a distribution is two sided and tests whether a sample is either greater than or less than a certain range of values. (from \\\"two-tailed test\\\" in investopedia)\" .\n \n-nidm:Map a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n-    rdfs:subClassOf prov:Entity ;\n-    prov:definition \"\"\"\n-2D or 3D structured dataset.\"\"\" .\n-\n-nidm:MaskMap a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n-    rdfs:subClassOf prov:Entity ;\n-    prov:definition \"map or surface on which the associated results are displayed. \" .\n-\n-nidm:MniCoordinateSystem a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n-    rdfs:subClassOf prov:Entity ;\n-    prov:definition \"Coordinate system defined with reference to the MNI atlas.\" .\n-\n-nidm:ModelParametersEstimation a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Activity ;\n+nidm:ModelParametersEstimation a owl:Class ;\n+    iao:IAO_0000112 \"\"\"activity(niiri:model_pe_id,\n+    [prov:type = 'nidm:ModelParametersEstimation',\n+    prov:label = \"Model parameters estimation\"])\"\"\" ;\n+    iao:IAO_0000116 \"\"\"BIRNLex or \n+NIDM Concept ID: nidm_41. \"\"\" ;\n+    rdfs:seeAlso \"stato:model parameter estimation\" ;\n     rdfs:subClassOf prov:Activity ;\n     prov:definition \"The process of estimating the parameters of a general linear model from the available data.\" .\n \n-nidm:ParameterEstimateMap a <http://www.w3.org/2002/07/owl#Class>,\n+nidm:ParameterEstimateMap a owl:Class ;\n+    iao:IAO_0000112 \"\"\"entity(niiri:parameter_estimate_map_id_1,\n+    [prov:type = 'nidm:ParameterEstimateMap',\n+    prov:location = \"file:///path/to/beta_0001.img\" %% xsd:anyURI,\n+    prov:label = \"Beta Map 1\" %% xsd:string,\n+    nidm:originalFileName = \"beta_0001.img\" %% xsd:string,\n+    nidm:atCoordinateSpace = 'niiri:coordinate_space_id_1',\n+    crypto:sha512 = \"e43b6e01b0463fe7d40782137867a...\" %% xsd:string])\"\"\" ;\n+    iao:IAO_0000116 \"\"\"BIRNLex or \n+NIDM Concept ID: nidm_45. \"\"\" ;\n+    rdfs:subClassOf nidm:Map,\n         prov:Entity ;\n-    rdfs:subClassOf prov:Entity ;\n     prov:definition \"A map whose value at each location is the estimate of a model parameter.\" .\n \n-nidm:PeakStatistic a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n-    rdfs:subClassOf prov:Entity ;\n-    prov:definition \"Statistic defined at the peak-level in an excursion set.\" .\n-\n-nidm:ReselsPerVoxelMap a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n-    rdfs:subClassOf prov:Entity ;\n-    prov:definition \"A map whose value at each location is the number of resels per voxel. \" .\n-\n-nidm:ResidualMeanSquaresMap a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n+nidm:ResidualMeanSquaresMap a owl:Class ;\n+    iao:IAO_0000112 \"\"\"entity(niiri:residual_mean_squares_map_id,\n+    [prov:type = 'nidm:ResidualMeanSquaresMap',\n+    prov:location = \"file:///path/to/ResMS.img\" %% xsd:anyURI,\n+    prov:label = \"Residual Mean Squares Map\" %% xsd:string,\n+    nidm:originalFileName = \"ResMS.img\" %% xsd:string,\n+    nidm:atCoordinateSpace = 'niiri:coordinate_space_id_1',\n+    crypto:sha512 = \"e43b6e01b0463fe7d40782137867a...\" %% xsd:string])\"\"\" ;\n+    iao:IAO_0000116 \"\"\"BIRNLex or \n+NIDM Concept ID: nidm_52. \"\"\" ;\n+    rdfs:seeAlso \"This is a map of \\\"residuals\\\" as defined at http://bioportal.bioontology.org/ontologies/STATO/?p=classes&conceptid=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FSTATO_0000234 \" ;\n     rdfs:subClassOf prov:Entity ;\n     prov:definition \"\"\"A map whose value at each location is the residual of the mean squares fit to the data.\n \"\"\" .\n \n-nidm:SPM a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n-    rdfs:subClassOf prov:Entity ;\n+nidm:SPM a owl:Class ;\n+    iao:IAO_0000116 \"\"\"BIRNLex or \n+NIDM Concept ID: nidm_56. \"\"\" ;\n+    rdfs:seeAlso \"http://www.fil.ion.ucl.ac.uk/spm/\" ;\n+    rdfs:subClassOf prov:Agent,\n+        prov:SoftwareAgent ;\n     prov:definition \"Statistical Parametric Mapping software package for the analysis of neuroimaging data from the FIL Methods Group.\" .\n \n-nidm:SearchSpaceMap a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n+nidm:SearchSpaceMap a owl:Class ;\n+    iao:IAO_0000112 \"\"\"entity(niiri:search_space_id,\n+      [prov:type = 'nidm:SearchSpaceMap',\n+      prov:location = \"file:///path/to/final_mask.nii\" %% xsd:anyURI,\n+      prov:label = \"Search Space\" %% xsd:string,\n+      nidm:originalFileName = \"final_mask.nii\" %% xsd:string,\n+      nidm:atCoordinateSpace = 'niiri:coordinate_space_id_2',\n+      spm:searchVolumeInVoxels = \"65593\" %% xsd:int,\n+      spm:searchVolumeInProductOfUnits = \"1771011\" %% xsd:float,\n+      spm:reselSize = \"22.9229643140043\" %% xsd:float,\n+      spm:searchVolumeInResels = \"2552.68032521656\" %% xsd:float,\n+      spm:searchVolumeReselsGeometry = \"[3, 72.3216126440484, 850.716735116472, 2552.68032521656]\" %% xsd:string,\n+      spm:noiseFWHMInVoxels = \"[2.95881189165801, 2.96628446669584, 2.61180425626264]\" %% xsd:string,\n+      spm:noiseFWHMInUnits = \"[8.87643567497404, 8.89885340008753, 7.83541276878791]\" %% xsd:string,\n+      nidm:randomFieldStationarity = 'spm:nonStationaryRandomField',\n+      crypto:sha512 = \"e43b6e01b0463fe7d40782137867a...\" %% xsd:string])\"\"\" ;\n+    iao:IAO_0000116 \"\"\"Domain or Attributes: spm:searchVolumeInProductOfUnits not found. BIRNLex or \n+NIDM Concept ID: nidm_100. \"\"\" ;\n     rdfs:subClassOf prov:Entity ;\n     prov:definition \"mask in which the inference was performed.\" .\n \n-nidm:SetStatistic a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n-    rdfs:subClassOf prov:Entity ;\n-    prov:definition \"Statistic defined at the set-level in an excusion set. In SPM it is defined as the number of clusters above a given size in an excursion set. \" .\n-\n-nidm:StatisticImageProperties a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n-    rdfs:subClassOf prov:Entity ;\n-    prov:definition \"Properties of the underlying statistical process.\" .\n-\n-nidm:StatisticalMap a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n-    rdfs:subClassOf prov:Entity ;\n-    prov:definition \"A map whose value at each location is a statistic. \" .\n-\n-nidm:SubVolumeMap a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n+nidm:SubVolumeMap a owl:Class ;\n+    iao:IAO_0000112 \"\"\"entity(niiri:sub_volume_id,\n+      [prov:type = 'nidm:SubVolumeMap',\n+      prov:location = \"file:///path/to/svc_mask.nii\" %% xsd:anyURI,\n+      prov:label = \"Sub-volume\" %% xsd:string,\n+      nidm:originalFileName = \"mask.img\" %% xsd:string,\n+      nidm:atCoordinateSpace = 'niiri:coordinate_space_id_2',\n+      crypto:sha512 = \"e43b6e01b0463fe7d40782137867a...\" %% xsd:string])\"\"\" ;\n+    iao:IAO_0000116 \"\"\"BIRNLex or \n+NIDM Concept ID: nidm_101. \"\"\" ;\n     rdfs:subClassOf prov:Entity ;\n     prov:definition \"mask defined by the user to restrain the space in which inference is performed.\" .\n \n-nidm:TContrastWeights a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n-    rdfs:subClassOf prov:Entity ;\n-    prov:definition \"Contrast based on a t-statistic.\" .\n-\n-nidm:TStatisticMap a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n-    rdfs:subClassOf prov:Entity ;\n-    prov:definition \"A map whose value at each location is a T-statistic value. \" .\n-\n-nidm:ZStatisticMap a <http://www.w3.org/2002/07/owl#Class>,\n-        prov:Entity ;\n-    rdfs:subClassOf prov:Entity ;\n-    prov:definition \"A map whose value at each location is a Z-statistic value. \" .\n-\n-nidm:atCoordinateSpace a <http://www.w3.org/2002/07/owl#DatatypeProperty>,\n-        prov:Agent ;\n+nidm:atCoordinateSpace a owl:ObjectProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000116 \"\"\"BIRNLex or \n+NIDM Concept ID: nidm_2. \"\"\" ;\n+    rdfs:domain nidm:Map ;\n+    rdfs:range nidm:CoordinateSpace ;\n     prov:definition \"Attribute between a SpatialImage entity and a CoordinateSpace entity that is used to associate spatial metadata with a physical file.\" .\n \n-nidm:clusterLabelId a <http://www.w3.org/2002/07/owl#DatatypeProperty>,\n-        prov:Agent ;\n+nidm:clusterLabelId a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000112 \"5\" ;\n+    iao:IAO_0000116 \"\"\"BIRNLex or \n+NIDM Concept ID: nidm_3. \"\"\" ;\n+    rdfs:domain nidm:ClusterStatistic ;\n+    rdfs:range \"http://www.w3.org/2001/XMLSchema#int\" ;\n     prov:definition \"Integer associated with a particular cluster as specified in the clusterLabelsMap.\" .\n \n-nidm:clusterLabelsMap a <http://www.w3.org/2002/07/owl#DatatypeProperty>,\n-        prov:Agent ;\n+nidm:clusterLabelsMap a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000112 \"file:///path/to/cluster_labels.img\" ;\n+    iao:IAO_0000116 \"\"\"Range: Pathtoaniftiimage not found. BIRNLex or \n+NIDM Concept ID: nidm_4. \"\"\" ;\n+    rdfs:domain nidm:ExcursionSet ;\n+    rdfs:range \"Pathtoaniftiimage\" ;\n     prov:definition \"A map whose value at each location denotes cluster membership. Each cluster is denoted by a different integer.\" .\n \n-nidm:clusterSizeInResels a <http://www.w3.org/2002/07/owl#DatatypeProperty>,\n-        prov:Agent ;\n-    prov:definition \"Number of resels that make up a cluster.\" .\n-\n-nidm:clusterSizeInVertices a <http://www.w3.org/2002/07/owl#DatatypeProperty>,\n-        prov:Agent ;\n+nidm:clusterSizeInVertices a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000112 \"10\" ;\n+    iao:IAO_0000116 \"\"\"BIRNLex or \n+NIDM Concept ID: nidm_5. \"\"\" ;\n+    rdfs:domain nidm:ClusterStatistic,\n+        nidm:ExtentThreshold ;\n+    rdfs:range \"http://www.w3.org/2001/XMLSchema#positiveInteger\" ;\n     prov:definition \"Number of vertices that make up the cluster.\" .\n \n-nidm:clusterSizeInVoxels a <http://www.w3.org/2002/07/owl#DatatypeProperty>,\n-        prov:Agent ;\n+nidm:clusterSizeInVoxels a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000112 \"18\" ;\n+    iao:IAO_0000116 \"\"\"BIRNLex or \n+NIDM Concept ID: nidm_6. \"\"\" ;\n+    rdfs:domain nidm:ClusterStatistic,\n+        nidm:ExtentThreshold ;\n+    rdfs:range \"http://www.w3.org/2001/XMLSchema#positiveInteger\" ;\n     prov:definition \"Number of voxels that make up the cluster.\" .\n \n-nidm:contrastName a <http://www.w3.org/2002/07/owl#DatatypeProperty>,\n-        prov:Agent ;\n+nidm:contrastName a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000112 \"\\\"Listening > Rest\\\"\" ;\n+    iao:IAO_0000116 \"\"\"Range: String not found. BIRNLex or \n+NIDM Concept ID: nidm_11. \"\"\" ;\n+    rdfs:domain nidm:ContrastMap,\n+        nidm:FContrastWeights,\n+        nidm:TContrastWeights,\n+        nidm:TStatisticMap ;\n+    rdfs:range \"String\" ;\n     prov:definition \"Name of the contrast.\" .\n \n-nidm:coordinate1 a <http://www.w3.org/2002/07/owl#DatatypeProperty>,\n-        prov:Agent ;\n+nidm:coordinate1 a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000112 \"-60\" ;\n+    iao:IAO_0000116 \"\"\"BIRNLex or \n+NIDM Concept ID: nidm_15. \"\"\" ;\n+    rdfs:domain nidm:Coordinate ;\n+    rdfs:range \"http://www.w3.org/2001/XMLSchema#int\" ;\n     prov:definition \"Coordinate along the first dimension in voxels.\" .\n \n-nidm:coordinate1InUnits a <http://www.w3.org/2002/07/owl#DatatypeProperty>,\n-        prov:Agent ;\n+nidm:coordinate1InUnits a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000112 \"-60\" ;\n+    iao:IAO_0000116 \"\"\"BIRNLex or \n+NIDM Concept ID: nidm_16. \"\"\" ;\n+    rdfs:domain nidm:Coordinate ;\n+    rdfs:range \"http://www.w3.org/2001/XMLSchema#float\" ;\n     prov:definition \"Coordinate along the first dimension in voxel units.\" .\n \n-nidm:coordinate2 a <http://www.w3.org/2002/07/owl#DatatypeProperty>,\n-        prov:Agent ;\n+nidm:coordinate2 a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000112 \"-28\" ;\n+    iao:IAO_0000116 \"\"\"BIRNLex or \n+NIDM Concept ID: nidm_17. \"\"\" ;\n+    rdfs:domain nidm:Coordinate ;\n+    rdfs:range \"http://www.w3.org/2001/XMLSchema#int\" ;\n     prov:definition \"Coordinate along the second dimension in voxels.\" .\n \n-nidm:coordinate2InUnits a <http://www.w3.org/2002/07/owl#DatatypeProperty>,\n-        prov:Agent ;\n+nidm:coordinate2InUnits a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000112 \"-28\" ;\n+    iao:IAO_0000116 \"\"\"BIRNLex or \n+NIDM Concept ID: nidm_18. \"\"\" ;\n+    rdfs:domain nidm:Coordinate ;\n+    rdfs:range \"http://www.w3.org/2001/XMLSchema#float\" ;\n     prov:definition \"Coordinate along the second dimension in voxel units.\" .\n \n-nidm:coordinate3 a <http://www.w3.org/2002/07/owl#DatatypeProperty>,\n-        prov:Agent ;\n+nidm:coordinate3 a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000112 \"13\" ;\n+    iao:IAO_0000116 \"\"\"BIRNLex or \n+NIDM Concept ID: nidm_19. \"\"\" ;\n+    rdfs:domain nidm:Coordinate ;\n+    rdfs:range \"http://www.w3.org/2001/XMLSchema#int\" ;\n     prov:definition \"Coordinate along the third dimension in voxels.\" .\n \n-nidm:coordinate3InUnits a <http://www.w3.org/2002/07/owl#DatatypeProperty>,\n-        prov:Agent ;\n+nidm:coordinate3InUnits a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000112 \"13\" ;\n+    iao:IAO_0000116 \"\"\"BIRNLex or \n+NIDM Concept ID: nidm_20. \"\"\" ;\n+    rdfs:domain nidm:Coordinate ;\n+    rdfs:range \"http://www.w3.org/2001/XMLSchema#float\" ;\n     prov:definition \"Coordinate along the third dimension in voxel units\" .\n \n-nidm:coordinateSystem a <http://www.w3.org/2002/07/owl#DatatypeProperty>,\n-        prov:Agent ;\n+nidm:coordinateSystem a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000112 \"nidm:MniCoordinateSystem\" ;\n+    iao:IAO_0000116 \"\"\"BIRNLex or \n+NIDM Concept ID: nidm_22. \"\"\" ;\n+    rdfs:domain nidm:CoordinateSpace ;\n+    rdfs:range nidm:MniCoordinateSystem ;\n     prov:definition \"Type of coordinate system.\" .\n \n-nidm:dimensions a <http://www.w3.org/2002/07/owl#DatatypeProperty>,\n-        prov:Agent ;\n-    prov:definition \"Dimensions of some N-dimensional data.\" .\n-\n-nidm:effectDegreesOfFreedom a <http://www.w3.org/2002/07/owl#DatatypeProperty>,\n-        prov:Agent ;\n+nidm:effectDegreesOfFreedom a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000112 \"1\" ;\n+    iao:IAO_0000116 \"\"\"Range: Positivefloat not found. BIRNLex or \n+NIDM Concept ID: nidm_26. \"\"\" ;\n+    rdfs:domain nidm:TStatisticMap ;\n+    rdfs:range \"Positivefloat\" ;\n     prov:definition \"Degrees of freedom of the effect.\" .\n \n-nidm:equivalentZStatistic a <http://www.w3.org/2002/07/owl#DatatypeProperty>,\n-        prov:Agent ;\n+nidm:equivalentZStatistic a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000112 \"3.5\" ;\n+    iao:IAO_0000116 \"\"\"Context: Functional. Parent: Data transformation;  http://purl.obolibrary.org/obo/OBI_0200000 not found. BIRNLex or \n+NIDM Concept ID: nidm_27. new parent: Peak. \"\"\" ;\n+    rdfs:domain nidm:PeakStatistic ;\n+    rdfs:range \"http://www.w3.org/2001/XMLSchema#float\" ;\n+    rdfs:subPropertyOf \"Data transformation;  http://purl.obolibrary.org/obo/OBI_0200000\" ;\n     prov:definition \"Statistic value transformed into Z units; the output of a process which takes a non-normal statistic and transforms it to an equivalent z score.\" .\n \n-nidm:errorDegreesOfFreedom a <http://www.w3.org/2002/07/owl#DatatypeProperty>,\n-        prov:Agent ;\n+nidm:errorDegreesOfFreedom a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000112 \"72.999999\" ;\n+    iao:IAO_0000116 \"\"\"Range: Positivefloat not found. BIRNLex or \n+NIDM Concept ID: nidm_28. \"\"\" ;\n+    rdfs:domain nidm:TStatisticMap ;\n+    rdfs:range \"Positivefloat\" ;\n     prov:definition \"Degrees of freedom of the error.\" .\n \n-nidm:expectedNumberOfClusters a <http://www.w3.org/2002/07/owl#DatatypeProperty>,\n-        prov:Agent ;\n+nidm:f-statistic a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000116 \"\"\"Context: io terms. Domain or Attributes: <notdirectlyinuse> not found. BIRNLex or \n+NIDM Concept ID: nidm_31. \"\"\" ;\n+    rdfs:domain \"<notdirectlyinuse>\" ;\n+    rdfs:range \"\" ;\n+    rdfs:seeAlso \"http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#F-Test\" ;\n+    prov:definition \"The statistic from the F-test, a test of the hypothesis that the standard deviations of two normally distributed populations are equal, and thus that they are of comparable origin.\" .\n+\n+nidm:grandMeanScaling a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000112 \"TRUE\" ;\n+    iao:IAO_0000116 \"\"\"BIRNLex or \n+NIDM Concept ID: nidm_96. \"\"\" ;\n+    rdfs:domain nidm:Data ;\n+    rdfs:range \"http://www.w3.org/2001/XMLSchema#boolean\" ;\n+    prov:definition \"Binary flag defining whether the data was scaled. Specifically, \\\"grand mean scaling\\\" refers to multipliciation of every voxel in every scan by a common value.  Grand mean scaling is essential for first-level fMRI, to transform the arbitrary MRI units, but is generally not used with second level analyses.\" .\n+\n+nidm:intraMaskMedian a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000112 \"155.23\" ;\n+    iao:IAO_0000116 \"\"\"BIRNLex or \n+NIDM Concept ID: nidm_98. \"\"\" ;\n+    rdfs:domain nidm:Data ;\n+    rdfs:range \"http://www.w3.org/2001/XMLSchema#float\" ;\n+    rdfs:seeAlso \"http://purl.obolibrary.org/obo/OBI_0200119\" ;\n+    prov:definition \"Median value considering only in-mask voxels. Useful diagnostic when computed on grand mean image when grandMeanScaling is TRUE, as the median should be close to targetIntensity.\" .\n+\n+nidm:numberOfDimensions a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000112 \"3\" ;\n+    iao:IAO_0000116 \"\"\"BIRNLex or \n+NIDM Concept ID: nidm_43. \"\"\" ;\n+    rdfs:domain nidm:CoordinateSpace ;\n+    rdfs:range \"http://www.w3.org/2001/XMLSchema#positiveInteger\" ;\n+    prov:definition \"Number of dimensions of a data matrix.\" .\n+\n+nidm:originalFileName a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000112 \"con_0001.img\" ;\n+    iao:IAO_0000116 \"\"\"Range: String not found. BIRNLex or \n+NIDM Concept ID: nidm_44. \"\"\" ;\n+    rdfs:domain nidm:DesignMatrix,\n+        nidm:ExcursionSet,\n+        nidm:Map ;\n+    rdfs:range \"String\" ;\n+    prov:definition \"Original name associated with a file (without path) in the context of the analysis software package.\" .\n+\n+nidm:pValue a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000112 \"8.95E-14\" ;\n+    iao:IAO_0000116 \"\"\"Range: Floatbetween0and1 not found. BIRNLex or \n+NIDM Concept ID: nidm_47. \"\"\" ;\n+    rdfs:domain spm:SetStatistic ;\n+    rdfs:range \"Floatbetween0and1\" ;\n+    rdfs:seeAlso \"\"\"http://purl.obolibrary.org/obo/IAO_0000121\n+http://purl.obolibrary.org/obo/OBI_0000175\n+http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#P-Value\"\"\" ;\n+    owl:sameAs \"This definition is from OBI. Please update this note if the definition is modified.\" ;\n+    prov:definition \"\\\"A quantitative confidence value that represents the probability of obtaining a result at least as extreme as that actually obtained, assuming that the actual value was the result of chance alone.\\\"\" .\n+\n+nidm:pValueFWER a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000112 \"0.05\" ;\n+    iao:IAO_0000116 \"\"\"Range: Floatbetween0and1 not found. BIRNLex or \n+NIDM Concept ID: nidm_48. \"\"\" ;\n+    rdfs:domain nidm:ClusterStatistic,\n+        nidm:ExtentThreshold,\n+        nidm:HeightThreshold,\n+        nidm:PeakStatistic ;\n+    rdfs:range \"Floatbetween0and1\" ;\n+    rdfs:seeAlso \"Synonym of \\\"nidm:pFWE\\\"\" ;\n+    owl:sameAs \"This definition is from OBI. Please update this note if the definition is modified.\" ;\n+    prov:definition \"\\\"A quantitative confidence value resulting from a multiple testing error correction method which adjusts the p-value used as input to control for Type I error in the context of multiple pairwise tests\\\"\" .\n+\n+nidm:pValueUncorrected a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000112 \"0.0542\" ;\n+    iao:IAO_0000116 \"\"\"Parent: p-value i.e. nidm:nidm_0011 not found. Range: Floatbetween0and1 not found. BIRNLex or \n+NIDM Concept ID: nidm_49. \"\"\" ;\n+    rdfs:domain nidm:ClusterStatistic,\n+        nidm:ExtentThreshold,\n+        nidm:HeightThreshold,\n+        nidm:PeakStatistic ;\n+    rdfs:range \"Floatbetween0and1\" ;\n+    rdfs:seeAlso \"http://purl.obolibrary.org/obo/IAO_0000121\" ;\n+    rdfs:subPropertyOf \"p-value i.e. nidm:nidm_0011\" ;\n+    prov:definition \"A p-value reported without correction for multiple testing.        \" .\n+\n+nidm:qValueFDR a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000112 \"0.000154\" ;\n+    iao:IAO_0000116 \"\"\"Parent: p-value i.e. nidm:nidm_0011 not found. Range: Floatbetween0and1 not found. BIRNLex or \n+NIDM Concept ID: nidm_50. \"\"\" ;\n+    rdfs:domain nidm:ClusterStatistic,\n+        nidm:ExtentThreshold,\n+        nidm:HeightThreshold,\n+        nidm:PeakStatistic ;\n+    rdfs:range \"Floatbetween0and1\" ;\n+    rdfs:seeAlso \"http://purl.obolibrary.org/obo/OBI_0001442\" ;\n+    rdfs:subPropertyOf \"p-value i.e. nidm:nidm_0011\" ;\n+    prov:definition \"P-value adjusted for the multiple testing, controlling for the False Discovery Rate\" .\n+\n+nidm:smoothingFWHM a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000112 \"[6 6 6]\" ;\n+    iao:IAO_0000116 \"\"\"Domain or Attributes: <notinuse> not found. BIRNLex or \n+NIDM Concept ID: nidm_54. \"\"\" ;\n+    rdfs:domain \"<notinuse>\" ;\n+    rdfs:range \"\" ;\n+    prov:definition \"Full width at half maximum of a Gaussian smoothing kernel in real world units (e.g. mm mm mm).\" .\n+\n+nidm:softwareVersion a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000112 \"SPM99, SPM2, SPM5, SPM8, SPM12b, FSL5.0.0\" ;\n+    iao:IAO_0000116 \"\"\"Range: String not found. BIRNLex or \n+NIDM Concept ID: nidm_55. \"\"\" ;\n+    rdfs:domain prov:SoftwareAgent ;\n+    rdfs:range \"String\" ;\n+    prov:definition \"Name and number that specifies the software version.\" .\n+\n+nidm:standardError a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000116 \"\"\"Domain or Attributes: <notinuse> not found. BIRNLex or \n+NIDM Concept ID: nidm_58. \"\"\" ;\n+    rdfs:domain \"<notinuse>\" ;\n+    rdfs:range \"\" ;\n+    owl:sameAs \"This definition is from OBI. Please update this note if the definition is modified.\" ;\n+    prov:definition \"\\\"A quantitative confidence value which is the standard deviations of the sample in a frequency distribution, obtained by dividing the standard deviation by the total number of cases in the frequency distribution.\\\"\" .\n+\n+nidm:stationaryRandomField a owl:DatatypeProperty,\n+        \"http://www.w3.org/1999/02/22-rdf-syntax-ns#Property\" ;\n+    iao:IAO_0000112 \"<this is an attribute value>\" ;\n+    iao:IAO_0000116 \"\"\"Range: <thisisanattributevalue> not found. BIRNLex or \n+NIDM Concept ID: nidm_59. \"\"\" ;\n+    rdfs:domain nidm:randomFieldStationarity ;","path":"notebooks/data/nidm-results.ttl","position":677,"original_position":677,"commit_id":"00d4c6bb0223401c227a2b0f214febba7a5e7a19","original_commit_id":"00d4c6bb0223401c227a2b0f214febba7a5e7a19","user":{"login":"nicholsn","id":463344,"avatar_url":"https://avatars.githubusercontent.com/u/463344?","gravatar_id":"12e81148e905851b4794288e8bf336e9","url":"https://api.github.com/users/nicholsn","html_url":"https://github.com/nicholsn","followers_url":"https://api.github.com/users/nicholsn/followers","following_url":"https://api.github.com/users/nicholsn/following{/other_user}","gists_url":"https://api.github.com/users/nicholsn/gists{/gist_id}","starred_url":"https://api.github.com/users/nicholsn/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/nicholsn/subscriptions","organizations_url":"https://api.github.com/users/nicholsn/orgs","repos_url":"https://api.github.com/users/nicholsn/repos","events_url":"https://api.github.com/users/nicholsn/events{/privacy}","received_events_url":"https://api.github.com/users/nicholsn/received_events","type":"User","site_admin":false},"body":"`nidm:randomFieldStationarity` has a lowercase first letter","created_at":"2014-06-19T14:44:16Z","updated_at":"2014-06-19T14:44:16Z","html_url":"https://github.com/ni-/ni-o/pull/6#discussion_r13971325","pull_request_url":"https://api.github.com/repos/ni-/ni-o/pulls/6","_links":{"self":{"href":"https://api.github.com/repos/ni-/ni-o/pulls/comments/13971325"},"html":{"href":"https://github.com/ni-/ni-o/pull/6#discussion_r13971325"},"pull_request":{"href":"https://api.github.com/repos/ni-/ni-o/pulls/6"}}},"pull_request":{"url":"https://api.github.com/repos/ni-/ni-o/pulls/6","id":17301349,"html_url":"https://github.com/ni-/ni-o/pull/6","diff_url":"https://github.com/ni-/ni-o/pull/6.diff","patch_url":"https://github.com/ni-/ni-o/pull/6.patch","issue_url":"https://api.github.com/repos/ni-/ni-o/issues/6","number":6,"state":"open","title":"Spreadsheet to owl conversion: match all columns to owl or rdfs properties","user":{"login":"cmaumet","id":5374264,"avatar_url":"https://avatars.githubusercontent.com/u/5374264?","gravatar_id":"38460286930552bf2c442fe908eefad7","url":"https://api.github.com/users/cmaumet","html_url":"https://github.com/cmaumet","followers_url":"https://api.github.com/users/cmaumet/followers","following_url":"https://api.github.com/users/cmaumet/following{/other_user}","gists_url":"https://api.github.com/users/cmaumet/gists{/gist_id}","starred_url":"https://api.github.com/users/cmaumet/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/cmaumet/subscriptions","organizations_url":"https://api.github.com/users/cmaumet/orgs","repos_url":"https://api.github.com/users/cmaumet/repos","events_url":"https://api.github.com/users/cmaumet/events{/privacy}","received_events_url":"https://api.github.com/users/cmaumet/received_events","type":"User","site_admin":false},"body":"Following #5, this is an extension of the conversion of the [term spreadsheet](https://docs.google.com/spreadsheets/d/16pC2cDsdxlzv2CzlNMtStqt5-xHwDEsU6MjZVxWhrE4/edit?usp=sharing) into an owl file (limited to NIDM-Results). \r\n\r\nEach column in the [term spreadsheet](https://docs.google.com/spreadsheets/d/16pC2cDsdxlzv2CzlNMtStqt5-xHwDEsU6MjZVxWhrE4/edit?usp=sharing) was matched to a field in the ontology. When no corresponding property was found (e.g. \"General Note\") the text was copied as a comment.\r\n\r\n@nicholsn: as I have not yet managed to install Protege on my machine, I have not updated the `owl` file yet (only the `turtle` version) but I hope I will be able to do it soon... The conversion code is in the [same ipython notebook](https://github.com/cmaumet/ni-o/blob/fromSpreadsheet/notebooks/NIDM-Results-Terms2RDF.ipynb), let me know what you 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