GitHub PushEvent at 2014-06-09 11:59:16
Repository: Bio-VertRes-Config
Actor: martinghunt
Payload: {"shas":[["8791a4b23e87c57f802a9390ca346d4a1e6bcf50","02da8435661cce3e2733a1babe2bc86f66cf816d@sanger.ac.uk","add tag regex for file of lanes","Craig Porter",false],["0d1e9bab655ac7d4aa186d78b9a5d41c2e97b48f","52059a69525047a1b96be4170b4beb63617e90ae@gmail.com","update default num threads for spades and velvet to 2","andrewjpage",false],["f25ddbac1cf73170783c16dcc717f51b8b7d199e","52059a69525047a1b96be4170b4beb63617e90ae@gmail.com","Merge pull request #37 from andrewjpage/spades_num_threads\n\nupdate default num threads for spades and velvet to 2","andrewjpage",false],["01fdc0a5d7553af400268f4f210f0205e50f91eb","52059a69525047a1b96be4170b4beb63617e90ae@gmail.com","specify pathogens gcdepth R script for QC","andrewjpage",false],["17a80f301076f2f2c286551bf95f99128e9ce5cf","52059a69525047a1b96be4170b4beb63617e90ae@gmail.com","Merge pull request #38 from andrewjpage/gc_depth\n\nspecify pathogens gcdepth R script for QC","andrewjpage",false],["82ae316c999e7020ec8ead878db3824529f009b0","4062e8e3b5d273f018b12c2370ff5a978b1cb45e@gmail.com","added config length filtering default and update assembly version number","martinghunt",false],["2024902a21c0a77065c38a57209f3aaa654c5ef6","4062e8e3b5d273f018b12c2370ff5a978b1cb45e@gmail.com","Merge pull request #39 from martinghunt/update_assembly_pipeline_version\n\nadded config length filtering default and update assembly version number","martinghunt",false],["e96bb82750075274f380f531f596a23e239d13f7","02da8435661cce3e2733a1babe2bc86f66cf816d@sanger.ac.uk","added tests for --smalt_mapper_l","Craig Porter",false],["0d13227f7b13cb885c36b972854fe8241c88b1d2","02da8435661cce3e2733a1babe2bc86f66cf816d@sanger.ac.uk","added --smalt_mapper_l parameter","Craig Porter",false],["88b162e1fff72a1255c14cd92a0a189a0d7bc3f6","02da8435661cce3e2733a1babe2bc86f66cf816d@sanger.ac.uk","updated help text","Craig Porter",false],["3085fde48f861a82205665c800724229a1042b69","02da8435661cce3e2733a1babe2bc86f66cf816d@sanger.ac.uk","updated error message","Craig Porter",false],["920e5216ec56434ef3911b99a8353ca0eadafb90","52059a69525047a1b96be4170b4beb63617e90ae@gmail.com","Merge pull request #35 from CraigPorter/fix_file_of_lanes\n\nadd tag regex for file of lanes","andrewjpage",false],["95474a3aa9b50a548feafb5bb5a0cc552b357498","52059a69525047a1b96be4170b4beb63617e90ae@gmail.com","Merge pull request #40 from CraigPorter/add_pairtype_option_for_smalt\n\nAdd pairtype option for smalt","andrewjpage",false],["03608ed583b3cf2e21f3985035fa454865bdbbaa","52059a69525047a1b96be4170b4beb63617e90ae@gmail.com","assembly for eukaryotes","andrewjpage",false],["bc2c7bdf22b27f0d30f4850dcf5c6f3adab1b6c1","52059a69525047a1b96be4170b4beb63617e90ae@gmail.com","fix packagename for script","andrewjpage",false],["040632e18a6edcea1a97adc45d8f0abf616ab00c","52059a69525047a1b96be4170b4beb63617e90ae@gmail.com","Merge pull request #41 from andrewjpage/leish_assembly\n\nassembly for eukaryotes","andrewjpage",false],["4792b8d8a5fabe3c2b32c3ab4adbc5d0ae135bfc","02da8435661cce3e2733a1babe2bc86f66cf816d@sanger.ac.uk","updated tests for bwa as default bacteria rnaseq mapper","Craig Porter",false],["f9b085fdf921bed6753812c7fb7ab1501cf4a314","02da8435661cce3e2733a1babe2bc86f66cf816d@sanger.ac.uk","bacteria rnaseq mapper defaults to bwa","Craig Porter",false],["969dff78d291b5445dbbb33eb895a655f2ea80fa","52059a69525047a1b96be4170b4beb63617e90ae@gmail.com","Merge pull request #42 from CraigPorter/set_bwa_for_bacteria_rnaseq\n\nSet bwa for bacteria rnaseq","andrewjpage",false],["a39a794c0196dd76e9f9e3b1ea959efa4bdc8989","52059a69525047a1b96be4170b4beb63617e90ae@gmail.com","use pathnfs05","andrewjpage",false]],"size":76,"ref":"refs/heads/master","head":"82594ceb8701bffef96bf78c686e5d74c3c0e8cb"}