GitHub PullRequestEvent at 2014-02-11 15:05:15
Repository: dbpedia-spotlight
Actor: pbnsilva
Payload: {"action":"opened","number":258,"pull_request":{"url":"https://api.github.com/repos/dbpedia-spotlight/dbpedia-spotlight/pulls/258","id":12418351,"html_url":"https://github.com/dbpedia-spotlight/dbpedia-spotlight/pull/258","diff_url":"https://github.com/dbpedia-spotlight/dbpedia-spotlight/pull/258.diff","patch_url":"https://github.com/dbpedia-spotlight/dbpedia-spotlight/pull/258.patch","issue_url":"https://api.github.com/repos/dbpedia-spotlight/dbpedia-spotlight/issues/258","number":258,"state":"open","title":"No segments* file found, when running index.sh","user":{"login":"sandroacoelho","id":1160826,"avatar_url":"https://gravatar.com/avatar/5275fc10ed67f8af1e514b1ef04d4437?d=https%3A%2F%2Fidenticons.github.com%2F0013e5734db39aa2658fddb17c60eeb3.png&r=x","gravatar_id":"5275fc10ed67f8af1e514b1ef04d4437","url":"https://api.github.com/users/sandroacoelho","html_url":"https://github.com/sandroacoelho","followers_url":"https://api.github.com/users/sandroacoelho/followers","following_url":"https://api.github.com/users/sandroacoelho/following{/other_user}","gists_url":"https://api.github.com/users/sandroacoelho/gists{/gist_id}","starred_url":"https://api.github.com/users/sandroacoelho/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/sandroacoelho/subscriptions","organizations_url":"https://api.github.com/users/sandroacoelho/orgs","repos_url":"https://api.github.com/users/sandroacoelho/repos","events_url":"https://api.github.com/users/sandroacoelho/events{/privacy}","received_events_url":"https://api.github.com/users/sandroacoelho/received_events","type":"User","site_admin":false},"body":"Hi there,\r\n\r\nindex.sh is crashing on this step:\r\n\r\n```\r\necho -e \"Creating a context index from occs.tsv...\\n\"\r\nmvn scala:run -Dlauncher=IndexMergedOccurrences \"-DjavaOpts.Xmx=$JAVA_XMX\" \"-DaddArgs=$INDEX_CONFIG_FILE|$DBPEDIA_WORKSPACE/data/output/occs.uriSorted.tsv\"\r\n```\r\n\r\nThe error I get:\r\n\r\n```\r\njava.lang.reflect.InvocationTargetException\r\n\tat sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)\r\n\tat sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)\r\n\tat sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)\r\n\tat java.lang.reflect.Method.invoke(Method.java:606)\r\n\tat scala_maven_executions.MainHelper.runMain(MainHelper.java:164)\r\n\tat scala_maven_executions.MainWithArgsInFile.main(MainWithArgsInFile.java:26)\r\nCaused by: org.apache.lucene.index.IndexNotFoundException: no segments* file found in org.apache.lucene.store.MMapDirectory@/data/spotlight/data/output/nl/index lockFactory=org.apache.lucene.store.NativeFSLockFactory@2b2c8b14: files: [write.lock]\r\n\tat org.apache.lucene.index.SegmentInfos$FindSegmentsFile.run(SegmentInfos.java:667)\r\n\tat org.apache.lucene.index.SegmentInfos$FindSegmentsFile.run(SegmentInfos.java:554)\r\n\tat org.apache.lucene.index.SegmentInfos.read(SegmentInfos.java:359)\r\n\tat org.apache.lucene.index.IndexWriter.<init>(IndexWriter.java:1138)\r\n\tat org.dbpedia.spotlight.lucene.index.BaseIndexer.<init>(BaseIndexer.java:75)\r\n\tat org.dbpedia.spotlight.lucene.index.BaseIndexer.<init>(BaseIndexer.java:86)\r\n\tat org.dbpedia.spotlight.lucene.index.OccurrenceContextIndexer.<init>(OccurrenceContextIndexer.java:57)\r\n\tat org.dbpedia.spotlight.lucene.index.MergedOccurrencesContextIndexer.<init>(MergedOccurrencesContextIndexer.java:79)\r\n\tat org.dbpedia.spotlight.lucene.index.IndexMergedOccurrences$.main(IndexMergedOccurrences.scala:119)\r\n\tat org.dbpedia.spotlight.lucene.index.IndexMergedOccurrences.main(IndexMergedOccurrences.scala)\r\n\t... 6 more\r\n```\r\n\r\nSeems to be an issue with flushing segments to disk. Any 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