GitHub PushEvent at 2014-08-27 09:43:41
Repository: Slicer
Actor: boxerab
Payload: {"shas":[["6423c42c75ea15e81ff4abebd3718fc83334edb0","bf7cfb42f8f4a2fa2fa486ead0fb19db05b7cb3c@3bd1e089-480b-0410-8dfb-8563597acbee","COMP: Link against vtkWrappingPythonCore to use vtkPythonUtil fucntions\n\ngit-svn-id: http://svn.slicer.org/Slicer4/trunk@23619 3bd1e089-480b-0410-8dfb-8563597acbee","jcfr",true],["cb222ffcc8f706b5573b380ca5ece37571696e74","bf7cfb42f8f4a2fa2fa486ead0fb19db05b7cb3c@3bd1e089-480b-0410-8dfb-8563597acbee","COMP: Remove redundant code from SlicerMacroPythonWrapModuleVTKLibrary\n\nThis commit de-duplicate code originally added to both \"vtkMacroKitPythonWrap.cmake\"\nand \"SlicerMacroPythonWrapModuleVTKLibrary\" in r23121.\n\nThe code in vtkMacroKitPythonWrap is sufficient.\n\ngit-svn-id: http://svn.slicer.org/Slicer4/trunk@23620 3bd1e089-480b-0410-8dfb-8563597acbee","jcfr",true],["d6e7e66d0f981219cefb7cc556d7dc50d7e9581b","bf7cfb42f8f4a2fa2fa486ead0fb19db05b7cb3c@3bd1e089-480b-0410-8dfb-8563597acbee","COMP: Remove 10.9 from the list of version to consider. Issue #3809\n\nSee inlined comment for more details.\n\ngit-svn-id: http://svn.slicer.org/Slicer4/trunk@23621 3bd1e089-480b-0410-8dfb-8563597acbee","jcfr",true],["3005329a7c542c8f40d25b1e96ea84488251944b","bf7cfb42f8f4a2fa2fa486ead0fb19db05b7cb3c@3bd1e089-480b-0410-8dfb-8563597acbee","BUG: Update version of VTK to use VTK_ENABLE_KITS.  Issue #3809\n\nThis commit updates to the latest version of VTK including Slicer\nspecific patches (branch: slicer-v6.2.0-7167ad1_2014-08-21)\n\nAdditionally:\n* Update VTK to include kit support for VTK python modules.\n* Tweak vtkMacroKitPythonWrap to consider VTK kits.\n* Enable VTK_ENABLE_KITS only if CMake >= 3\n* Explicitly specify vtkRenderingContextOpenGL. Basically following\nkitware/VTK@c5121871,  the OpenGL override for vtkContextDevice2D has been\nmoved int Rendering/ContextOpenGL, we have to make sure that we link\nto vtkRenderingContextOpenGL.  See [1] for more info.\n\n[1] http://www.vtk.org/Wiki/VTK/VTK_6_Migration/Factories_now_require_defines\n\n// --------------------------------\n$ git shortlog df24b795..e59c76c --no-merges\nBen Boeckel (1):\n      python: split wrapping functions\n\nJean-Christophe Fillion-Robin (5):\n      python: Add wrapping of kits if VTK_ENABLE_KITS is ON\n      modules: Re-order RenderingOpenGL libraries to fix VTK_ENABLE_KIT link error\n      python: Update python module dependency to account for VTK_ENABLE_KITS\n      python: Configure PythonInit file for kit when VTK_ENABLE_KITS is ON\n      python: Add VTK_ENABLE_KITS to VTKConfig\n\n// ---------------------------------\n$ git shortlog slicer/slicer-v6.1.0..df24b795 --no-merges\n\nAndrew Bauer (8):\n      Need to check for static targets before adding abi visibility flags.\n      Composite data writers weren't passing down the HeaderType info.\n      Passing missing parallel writer options to piece writers.\n      Fixing overflow issue that appeared with GCC compilers.\n      Fix the way point and cell data arrays are marked for reading.\n      Adding in arctan2 through numpy.\n      Adding the ability to not delete the passed in arrays.\n      Fixed memory leak in test and added in comments for clarification.\n\nAndrew Maclean (8):\n      Remove WindowLevelInterface.tcl and WindowLevelInterface.py\n      Revert Remove WindowLevelInterface.tcl and WindowLevelInterface.py\n      Sphere widget behaves better when scaled down to zero\n      ENH: VTK Parametric surfaces - modernised the code.\n      ENH: Remove the need to manually regenerate the hill data.\n      DOC: Update vtkRandomHills documentation.\n      BUG: Fix by adding a new keyword.\n      ENH: Add option to return an ordinal lookup table.\n\nAntonio Cervone (1):\n      Fixed the BiQuadraticQuad interpolator\n\nBen Boeckel (117):\n      STLWriter: Raise an error for non-triangles\n      STLReader: Close the file when an error occurs\n      ExodusIIReader: Add the title to the field data\n      STLReader: Fix error signaling when reading files\n      AVIWriter: Don't overflow the fourcc storage\n      AVIWriter: Fix a comment typo\n      Exodus: Always attach the title to the output fields\n      Rewrite the testing macros\n      Update the Cxx test call sites\n      Update the MPI test call sites\n      Update the Python test call sites\n      Update Tcl test call sites\n      Minor CMake logic simplification\n      Copy Statistics tests to StatisticsGnuR\n      Infovis: Add an include for newer Boost versions\n      ParallelMPI: Add missing return statement\n      Allow arguments to be passed directly to Python\n      Skip adding the executable if no tests are created\n      Allow for overriding the data directory in tests\n      Allow overriding the baseline directory in tests\n      Build the VTK test data directory properly\n      Support custom baselines in tests\n      Store VTK's ExternalData in its source directory\n      Support VTKExternalData_OBJECT_STORES as well\n      Support custom ExternalData targets for tests\n      Support flags to tests common at the module level\n      Support JUST_VALID for Python tests\n      Support Python+MPI testing\n      Use VTK_TEST_OUTPUT_DIR rather than rebuilding the path\n      examples: Fix typo in testing calls\n      ParallelGeometry: Fix Grid symbol scoping\n      testing: Use vtk-example as a fallback for prefix\n      Fix test function signatures\n      testing: Don't look for tests when making an executable\n      FiltersGeometry: Remove unnecessary links\n      Filters/Geometry: Remove some unused functions from tests\n      Filters/Geometry: Hide WriteGrid if ENABLE_IO isn't on\n      testing: add some missing TEST_DEPENDS\n      pythoncore: extract python objects from arguments\n      wrapping: add function to check for Python objects\n      wrapping: wrap PyObject* in python code\n      python: accept any argument for PyObject* arguments\n      vtkAlgorithm: fix a typo\n      FiltersPython: create a vtkPythonAlgorithm class\n      python: fix leaks when setting constants in wrappers\n      vtkPythonAlgorithm: support older pythons\n      vtkpython: add site-packages to the path\n      vtkFiltersPython: Disable without Python wrapping\n      wrapping: add variables to exclude from language-specific wrapping\n      vtkFiltersPython: exclude from Java and Tcl wrapping\n      java: get the list of java modules properly\n      testing: append the tests to the given variable\n      pythonalg: use keyword arguments rather than members\n      pythonalg: raise an error in RequestData by default\n      wrapping: remove the ${module}_WRAP_PYTHON variable\n      vtkStructuredImplicitConnectivity: fix msvc warnings\n      typo: fix some typos\n      unused: remove unused functions\n      mpi4py: add module information\n      mpi4py: link to CMAKE_DL_LIBS\n      testing: skip test executables with no tests\n      IOVPIC: include MPI headers as SYSTEM headers\n      cmake: set policy 0053 if available\n      cmake: set policy 0053 in thirdparty cmake\n      mpi4py: add a class to convert communicators\n      wrapping: check for Tcl wrapping exclusion for warnings\n      vtkAMRUtilities: split out vtkParallelAMRUtilities\n      hierarchy: use a .txt extension\n      GenerateExportHeader: support object libraries as well\n      vtk_module: support a KIT argument\n      modules: add modules to \"kits\"\n      linking: wrap tll() with a module-aware function\n      export: OBJECT libraries may not be exported\n      modules: output kit information in the module tree\n      modules: topo-sort modules with kits as well\n      modules: build kits from the member modules\n      module: depend on the dependent module object library\n      python: add an option to disable vtkpython\n      testing: check for pvtkpython before using it\n      vtkpython: don't install if not enabled\n      vtkAVIWriter: make a more informative error message\n      IO/Geometry: add obj index tests\n      FiltersParallelGeometry: move functions to the sources\n      vtkMPICommunicator: avoid deprecated MPI functions\n      vtkInstantiator: remove instantiator macro from main sources\n      typo: remove duplicate source listing\n      vtkCompositePolyDataMapper2: cache opacity check\n      vtkCompositePolyDataMapper2: include <algorithm> for std::max\n      vtkCompositePolyDataMapper2: avoid a NULL dereference\n      OpenGL: use STATUS for the OSMesa message\n      vtkPStreamTracer: conditionalize functions\n      vtkPTemporalStreamTracer: remove useless code\n      unused: add a macro to mark functions as \"unused\"\n      vtkChartBox: initialize segmentIndex\n      nit: remove extra semicolon\n      vtkMPI: install so that vtk_mpi_link is available\n      python: install packages properly\n      opengl2: use STATUS for the OSMesa message\n      Maintenance: recognize the KIT keyword in scripts\n      module: add comment to update maintenance scripts too\n      Maintenance: recognize language exclusion keywords\n      warnings: fix narrowing warnings\n      TestSurfacePlot: loop using vtkIdType\n      vtkQuaternionInterpolator: call the constructor properly\n      warnings: remember values with the proper type\n      warnings: use static casts to point out precision loss\n      warnings: use floating point intermediate values\n      warnings: resolve unused variables\n      vtkOpenGLImageMapper: fix unintentional shadowing\n      warnings: fix signed/unsigned comparison warnings\n      vtkOpenGLProperty: remove unused function\n      unused: use the vtkNotUsed macro\n      Q4VTKWidgetPlugin: only define qDebug if not already defined\n      mpi4py: use the output, not the result\n      cmake: remove unnecessary condition copies\n      vtkSmartPyObject: ignore warning C4127 on MSVC\n      mpi4py: use old code with Python 2.6 as well\n\nBerk Geveci (52):\n      Removed priority based streaming and fast path.\n      Removed unused code from vtkModelMetaData and vtkExodusModel\n      COMP: Fixed compiler error - needed to remove functions from .h.\n      Improved test to increase vtkDistributedDataFilter's coverage.\n      Cleaned up the Exodus metadata.\n      Fixed minor typo - case sensitivity issue.\n      Removed verts from streaklines - lines are enough.\n      Removed unnecessary recursion in pipeline streaming.\n      Filter was modifying self in request. Fixed.\n      Fixed minor typo in documentation.\n      Added test for vtkTableBasedClipDataSet.\n      Added caching to temporal interpolator.\n      Fixed minor bug in the ensight gold reader.\n      Added EnSight tests to increase coverage.\n      Added initial ghost points support to vtkDataSetSurfaceFilter.\n      PERF: Parallel streamline was slow. Fixed.\n      Refactored how pieces and extents are handled.\n      Update the XML readers and writers to work with pipeline changes.\n      Cleaned up and fixed transmit filters for structured data.\n      Fixed bug in send structured data.\n      Fixed legacy parallel reader and writer.\n      BUG: Was using array of wrong size.\n      Fixed compiler warnings.\n      Changed synchronized templates class for new pipeline behavior.\n      Removed unused keys.\n      Updated filters and sources to work with new pipeline logic.\n      Moved key.\n      Cleaned up extent translators.\n      Removed unnecessary reference to extent translator\n      ExtractSelection was not managing pieces corretly. Fixed.\n      Filters should silently handle empty input\n      Fixed multiple issues with resample/probe filters.\n      Fixed contour filters\n      Fixed issues in the group filter.\n      Fixed crash in the empty input test.\n      Fixed vtkXdmfReader for parallel structured data.\n      Parallel Exodus writer was not asking for pieces. Fixed.\n      Added new meta-data and request capability to the pipeline.\n      PERF: Removed unnecessary function call.\n      Added an ensemble source.\n      Added documentation and testing to vtkPythonAlgorithm.\n      Fixed no newline at end of file warnings.\n      Executive was setting update extent initialized falsely.\n      PERF: Removed unnecessary garbage collection.\n      Fixed indentation and style to match VTK's.\n      BUG: Filter was overwriting input scalars. Fixed.\n      Added modules that create a numpy type interface.\n      Certain MPI types were not being recognized by mpi4py.\n      Improved TestNumpyInterface to cover various append implementations.\n      Added sum and mean per block to Python algorithms.\n      Added support for CompositeDataSet.Points.\n      Fixed innaccurate comments.\n\nBill Lorensen (26):\n      COMP: Test driver array bounds error\n      BUG0013829: vtkAssembly::GetBounds adds bounds which are uninitialized\n      BUG0014331: Filter skips VTK_CUBIC_LINE\n      COMP: Restore TestTessellator test\n      ENH: Added tests that were removed during modularization\n      COMP: Refactored TestDataObjectIO\n      COMP: test require NO_VALID modifier\n      ENH: Add removed tests\n      COMP: Improve coverage of vtkMeshQuality\n      COMP: Missing NO_VALID\n      ENH: Improve code coverage script\n      BUG: Flawed logic for NO_OUTPUT\n      COMP: Python unittest requies NO_OUTPUT\n      COMP: Performance warning: int to bool\n      COMP: Remove QtInitialization from otherPrint test\n      ENH: Remove ThirdParty code from coverage results\n      COMP: Remove bogus line info from generated files\n      ENH: Unit test for ParametricSpline\n      ENH: Coverage for MultiThreshold.\n      BUG: CreateDefaultLookupTable crashes if Input is NULL.\n      ENH: Add some more coverage for MultiThreshold\n      ENH: Improve code coverage for UnicodeStringArray\n      ENH: Unit test for vtkMath\n      COMP: Adjust tolerances\n      COMP: Guard against infinite loop in vtkClearOpenGLErrors\n      ENH: Provide PlaybackFile for recorded interaction events\n\nBrad King (35):\n      COMP: Drop invalid custom commands from HDF5\n      COMP: Drop missing dependencies of target 'vtkpython_pyc'\n      vtkhdf5: Remove extra calls to cmake_minimum_required\n      Accelerators/Dax: Remove extra call to cmake_minimum_required\n      Refactor top-level CMake Policy settings as loop\n      Examples: Set required CMake version and policies before project()\n      Set CMake Policies CMP0025 and CMP0042 as necessary\n      Rendering/Volume: Convert new baseline to ExternalData content link\n      Wrapping/Tcl: Fix CMake Policy CMP0050 warnings\n      IO/XML: Remove unnecessary <sstream> include\n      IO/XML: Add missing <string> include\n      IO/XML: Fix HeaderTest for this module\n      vtkOStreamWrapper: Support std::string\n      Revert \"vtkOStreamWrapper: Support std::string\"\n      vtkOStreamWrapper: Support std::string\n      Revert \"vtkOStreamWrapper: Support std::string\"\n      vtkOStreamWrapper: Support std::string\n      Allow custom TestTM3DLightComponents timeout\n      Allow custom TestProp3DFollower timeout\n      Honor VTK_INSTALL_NO_DEVELOPMENT for archive libraries\n      Use vtkMPI.cmake helper for all module MPI tests\n      Set MACOSX_RPATH property default consistently across CMake versions\n      ExternalData: Add backtrace to missing file warning\n      Export the locations of Qt5 packages on which modules depend\n      Allow configuration of external module dependency locations\n      Views/Infovis: Add another baseline for TestConeLayoutStrategy\n      Allow custom Interaction/Widgets test timeouts\n      Fix ExternalData pre-commit hook on msysGit\n      Add option to exclude VTKData target from default build\n      mpi4py: Suppress warnings in third-party code\n      vtkFFMPEGWriter: Fix build with libavcodec55\n      Exclude classes requiring a QApplication from VTK smoke tests\n      module: fix export macros with kits\n      vtkglew: Install glew header files\n      IO/ADIOS: Exclude module from VTK_BUILD_ALL_MODULES\n\nBurlen Loring (1):\n      surface LIC - stl and NULL\n\nChris Harris (22):\n      Add failure filter to session.auth(...) deferred\n      Add error function to vtk:mouseInteraction RPC\n      vtkWeb: Add newline to end of each proxy map entry\n      vtkWeb: Teach launcher.py to wait for ready_line\n      vtkWeb: Add appropriate error codes for launch requests\n      vtkWeb: Don't reset viewer to null on updateViewer(...)\n      vtkWeb: Propagate mouse events to VGL\n      vtkWeb: Fix calls to old VGL API\n      vtkWeb: Rename ogs.vgl => vgl\n      Rename md5 => sceneMD5 to avoid confusion\n      Update canvas size before creating viewer\n      Prevent mouse event handlers be bound multiple times\n      Update VGL to master\n      Update version of VGL\n      Prevent scene and clipping range from being reset\n      Update VGL to lastest version\n      vtkWeb: Refactor fetchObject(..) to use cached objects\n      Add code to clean of VGL actor cache\n      Add missing initialization of member\n      Fix typo introduce by 06aaa805 session => m_session\n      Update to modern CMake style\n      Allow location of OSMesa install to be specified\n\nChuck Atkins (1):\n      Initial ADIOS readers and writers\n\nCory Quammen (7):\n      BUG: Fix build failure in RenderingParallelLIC on Intel compiler\n      Added \"sticky\" axes mode to vtkCubeAxesActor\n      Fixed linkage problem in Windows\n      Improved comment handling\n      KW00001404: Major overhaul of vtkAppendFilter\n      Fixed memory leak and improper erasing of std::set elements\n      Fixed error in appending cell data\n\nDan Lipsa (9):\n      Report an error when writing a file with changing topology.\n      Update documentation.\n      Remove debugging printouts.\n      Name enum LEFT, BOTTOM, ... Location.\n      Add component-wise set functions for Border and Gutter (vtkChartMatrix)\n      Set Bold and Italic axis label properties for ScatterPlotMatrix.\n      vtkMultiProcessStream: Add insert and extract operators for bool\n      Fix Windows compilation warning.\n      Forces the compiler to convert a char* to a string rather than a bool.\n\nDave DeMarle (35):\n      Increment version to VTK 6.2.0\n      Add a test for the VPIC reader\n      document arguments to test macros\n      move dashboard management scripts into better place\n      fix link errors that happened when I turned on InfovisParallel\n      deprecate this module\n      fix a compilation warning\n      make rubber band look correct on scenes with textures\n      optimize geojson writer\n      more optimization of geojson writer\n      fix variety of dashboard problems\n      Put libxdmf into a namespace so that libxdmf3 can coincide with it.\n      Adapt libxdmf to build within VTK.\n      add cmakescript infrastructure to make libxdmf a VTK module\n      Add a reader and writer for the new xdmf library.\n      Fixes for xdmf3 regression test data.\n      Fix issues the dashboards turned up.\n      Fix more issues the dashboards turned up.\n      Really fix on of the issues the dashboards turned up\n      Fix a regression in the xdmf bump\n      STYLE: improve comments and organize internal classes\n      fix a case of discarded arrays\n      Remove stray debugf.\n      bring back subsets\n      put array reuse in\n      Fix dashboard warnings and test failure.\n      disable a balky test until we can fix it\n      Add file series reading and top level spatial partitioning\n      fill in time varying graphs\n      STYLE: pull helpers out and format all for vtkstyle\n      move strict partition multipiece constuction out to reader level\n      disable oggtheora on cray too\n      Fix problems that the dashboards turned up.\n      remove MetaIO to replace with updated content\n      exclude matlab from the \"all\" modules set\n\nDavid C. Lonie (14):\n      Tie vtkUnstructuredGridBase into the dataset type system.\n      Update baseline\n      Handle empty array initialization in numpy_support.\n      Don't reset traversal location in each iteration of box clip filter.\n      Process facestream in vtkExtractUnstructuredGridPiece::RequestData.\n      Handle polyhedra in vtkUnstructuredGridWriter.\n      Disable FP frame buffer when GL_ARG_texture_float is not present.\n      Return early if ProjectedTetrahedra volume rendering is unsupported.\n      Add new baseline for rendering without floating point buffers.\n      Add new baseline for dashlin1.\n      Pass std::strings through the OStreamWrapper.\n      Revert \"Pass std::strings through the OStreamWrapper.\"\n      Return early in TransformPoints if input is NULL.\n      Update system font test baseline.\n\nDavid Cole (6):\n      Add a vtkMath method to compute the angle between two vectors\n      Tests: Re-activate the old TestResliceCursorWidget tests\n      Tests: Add test for the vtkCornerAnnotation class\n      - Follow on commit to use the right style #include (\"\", not <>)\n      BUG: Add missing header files to enable try_run tests to run without crashing\n      Testing: Call SetMultiSamples(0) from tests\n\nDavid Gobbi (19):\n      14196: Allow unicode path in vtkLoadPythonTkWidgets.py.\n      In wrappers, guard against #including dirs.\n      Fix cell picker for images with negative spacing.\n      Fix uninitialized array warnings.\n      Fix unreachable code warning in otherCellTypes.cxx.\n      Fix a crash when deleting vtk-python objects.\n      Fix bad SetColor/GetColor interaction in vtkProperty.\n      Fix the extent for tiled tiff files.\n      Two fixes for certain lsm (zeiss) tiff images.\n      Add reader/writer for NIFTIv1 and NIFTIv2 files.\n      Add SetSlabModeToSum() to vtkImageResliceMapper.\n      Clean up vtkMedicalImageProperties PrintSelf.\n      NIFTI makes IOImage module depend on vtkzlib.\n      Fix warning about trailing comma in enum list.\n      Bad null pointer check in vtkBSplineTransform.\n      Fix segfault if vtkImageWeightedSum's inputs don't match.\n      Rewrite the comments for vtkDataArray::GetRange.\n      Add generic PyObject support to vtkPythonOverload.\n      Provide a method to set the sample spacing for slab modes.\n\nDavid Stoup (1):\n      Add multi-layer support to the vgl interface.\n\nDavid Thompson (6):\n      Bug 14713: Read LS-Dyna point coordinates properly.\n      Add a regression test for bug 14713.\n      Small fixes to docs, comments, and formatting.\n      Add support for reading polyhedra.\n      Test reading a polyhedral Exodus dataset.\n      Add test data with multiple polyhedra.\n\nEli Kahn (4):\n      Adding mousewheel support to Java GUI components.\n      Fix java code formatting.\n      Add java file to generated jar file.\n      In java code, handle situation when wheel rotation value is zero.\n\nGeorg Hammerl (1):\n      Add caching for time steps in EnSightGoldReader binary reader.\n\nGeorge Zagaris (18):\n      Disable I/O in TestStructuredAMRGridConnectivity\n      ENH: DuplicateNodes property to RCB partitioners\n      BUGFIX: Fix integer overflow in vtkStructuredData\n      ENH: FieldData deserialization to a subextent\n      ENH: Add blanking to vtkXMLUniformGridAMRReader\n      ENH: Implicit structured data connectivity\n      COMP: Update vtkFiltersParallelMPI tests\n      ENH: Rename nodes to points in vtkStructuredData\n      BUGFIX: Add guards for NULL ivars in PrintSelf\n      BUGFIX: Fix issue with unigrid enzo datasets\n      COMP: Correct ParallelMPI module test dependencies\n      COMP: Remove HyperTreeGridGeometry::UpdateExtent()\n      ENH: Update extract structured data filters\n      ENH: Use vtkImageData in implicit connectivity\n      ENH: RectilinearGrid implicit connectivity support\n      ENH: MPI structured data extraction filters\n      COMP: Fix a few compiler warnings\n      ENH: Added broadcast implementation for RMI triggers\n\nJacob Becker (1):\n      Fix bad check for incomplete polygons, fix div-by-zero.\n\nJameson Merkow (1):\n      Add files, and made modifications for MatlabMex to wotk in vtk 6\n\nJean-Christophe Fillion-Robin (3):\n      vtkPythonCommand - Add support for additional call data types\n      vtkPythonCommand - Fix indent and variable names\n      Configure VTKConfigVersion consistent with VTK's compatibility guarantees\n\nJeffrey Baumes (1):\n      Fixing array bounds issue\n\nJoachim Pouderoux (19):\n      Introduce Robust PCA.\n      Introduce box plot and the corresponding chart.\n      Introduce Compute Quartiles filter to generate box plots tables.\n      Enhance bag plot API to allow specify line and points properties.\n      Fix bag plot legends.\n      Fix black box plots issue.\n      Fix double to unsigned char cast error on clang compiler.\n      Fix bag plot and functional bag plots tests.\n      Fix and enhance the box plot and chart\n      Fix and enhance bag plots.\n      Fix bug in picking of invisible props in an assembly.\n      Clean an enhance hypertree grids.\n      Fix potential compiler error with ternary operator.\n      Replace a verbose cout by a vtkDebugMacro()\n      Fix clang errors on array initialization\n      Fix and clean vtkWin32OpenGLRenderWindow class.\n      Fix functional bag plot.\n      Clean and uniformize vtkPoints & vtkPoints2D.\n      Fix crash on normal computation when polygon is empty.\n\nJohn Stark (2):\n      Add a test for vtkImageImport / vtkImageExport\n      Fix pipeline update issues in vtkImageExport\n\nJorge Perez (1):\n      Upgrading the Tcl examples wrt. VTK 6.x\n\nJulien Finet (4):\n      Prevent error message when deep copying vtkGridTransform\n      Change GetInputConnection error message into a debug warning message\n      Enable GPU Raycast volume mapper for recent NVIDIA drivers on Mac OS X\n      GPU raycast volume rendering now supports textures larger than 1024\n\nJulien Jomier (2):\n      ENH: Fixes for ActiViz.Net\n      BUG: Wrong transformation used to restore original parameters\n\nKWSys Robot (1):\n      KWSys 2014-03-12 (dd873734)\n\nKen Martin (115):\n      some rough changes to the VBO polydata mapper\n      some more cleanup\n      added light override\n      compute cam matrix, add posiitonal light in progress\n      updates to support positional lights\n      change how object factory is done\n      some fixes to normals etc\n      added ambient color in\n      some module changes override actor change bunny color\n      changes in normal calcs\n      moved property over and started gutting it\n      fix normals on test\n      minor changes\n      some bug fixes and start on mapper2D\n      allow testing using old mapper\n      bug fix\n      added cxx for Helper\n      duh\n      many updates to 2d mapper\n      bug fix\n      lots of rough changes\n      moved renderer over, moved init code\n      in progress\n      in progress cell scalars\n      some cleanup and fixes\n      lots of changes in progress\n      more fixes\n      fix array bounds issue and memory leak\n      fix performance issue\n      add fast path for float points no col no norm and fix bug\n      started on texture mapping\n      first cut a tmap support\n      add textured backgrounds and fix issue with gradients\n      bug fixes\n      clean up a bit\n      change opacity clean some texture stuff\n      minor fixes\n      fix crash on test\n      fix crash on test\n      add fragment shader lighting of lines\n      support textured luts some cleanup\n      some support for resolving coincident polys\n      ambient color fix\n      some minor fixes\n      start working on image slice mapper\n      add baseine images\n      updated baseline images\n      updated baseline image\n      minor backwards compatability change\n      basic ImageSliceMapper conversion\n      some more fixes\n      moved render window over\n      bug fix in old VTK\n      bunch of optimization more to come\n      bad optimizations and missing classes'\n      doh forgot really key line\n      bug fix and minor cleanup\n      fix a glyph bug and minor cleanup\n      another bug fix\n      better picking support some cleanup\n      move interface closer to old Rendering API\n      convert ImageMapper\n      some bug fixes\n      another valid image, remove unused test\n      fix SetPixelData and fix picking issue\n      add depth peeling\n      make wider so we can see errors\n      some win32 fixes\n      rename VBO mapper\n      cleaned up the mapper a bit\n      minor cleanup\n      minor lighting fix for intel\n      handle wireframe tstrips\n      some bug fixes etc\n      more fixes\n      more fixes\n      add support for edge visibility\n      modify API to be a bit more future proof\n      fix some picking issues\n      some fixes for andriod\n      some fixes for andriod\n      remove some old code\n      some fixes for andriod\n      more andriod glew changes\n      more andriod glew changes\n      many changes to support glew and android\n      many changes to support glew and android\n      many changes to support glew and android\n      first working in quotes android app\n      first working in quotes android app\n      comment out more modukles by default\n      some warning fixes and minor cleanups\n      fix some more warnings\n      fix some more warnings\n      make vtkOpenGLTexture use vtkTextureObject\n      convert depth peeling to use more texture objects\n      a tad more depth peeling cleanup\n      add android output window\n      better debugging out for shader programs\n      clean up some shader code\n      new android interactor and cleanup\n      some shader cleanup\n      some android fixes in progress\n      improved release graphics resources\n      improved release graphics resources\n      minor change to be more compatible with some opengl hardware\n      fix android resize and lingering glew issue\n      added multitouch framework and support on windows and android\n      fix java issue\n      in progress\n      in progress\n      more reasonable first cut at java android\n      clean up some shader code and classes\n      removed unused includes\n      fix some warnings\n\nKenneth Moreland (2):\n      Dax marching cubes now uses input array not active scalars.\n      Allow Dax marching cubes and threshold to work with doubles.\n\nLisandro Dalcin (1):\n      import mpi4py 1.3\n\nMarco Cecchetti (5):\n      vtkColorString - Helper class for defining a color through a string.\n      Merged vtkColorString into vtkNamedColors.\n      I added a RGBAToHTMLColor and made some minor changes.\n      Tentative fix for Windows build issue.\n      Tentative fix for big-endian machine issue.\n\nMarcus D. Hanwell (98):\n      Added a test for biquadratic quad interpolation\n      Exclude the vtkgl.* files (generated code) from coverage\n      Make consistent with vtkBiQuadraticQuad\n      Added back the QtSQL test for the database class\n      Removed misleading comment - test is built\n      Added back various rendering tests\n      Added back the named components test in FiltersCore\n      Removed a few remaining Cg related files\n      Refactored the TIFF reader, add support for floats\n      Added progress updates when reading a volume\n      Remove redundant checks for old JPEG compression\n      Copy simple TIFF images into buffers more directly\n      First pass at a new render widget\n      Implement a basic VBO based poly data mapper\n      Basic support for color from property\n      Add the find module for Eigen 3\n      Added a hack to override OpenGL overrides with GL2\n      Roughly mapping the colors/scalars, updates to shaders\n      Normalize the colors, and put the light the other side...\n      Added the dragon model (already in external data store)\n      Moved the VBO and IBO creation to helper functions\n      Use the vtkPolyDataNormals filter to calculate normals\n      Added a points/lines test, added point/line rendering\n      Added in a program for lines, change\n      Moved the replace function into the helper header\n      Refactoring a little, movig IBO stuff into structs\n      Added a polyline, and basic support for rendering it\n      Refactor uniforms a little, enable point rendering again\n      Small changes for point size and line width\n      Minor clean up for includes in the mappers\n      Ensure we set the active shaders\n      Removed commented code/classes from the test\n      Added in the case for multiple renders/VBO updates\n      Refactor the shader API to comply with VTK style\n      Refactor API, comply with VTK style\n      Refactor the shader program API to comply with VTK style\n      Added a Vertex Attribute Object (VAO) class\n      Enable textures now that the vtkTexture class doesn't do it\n      Set the z-spacing in a TIFF to match x-spacing\n      Early attempt at getting the 3D glyph mapper working\n      Hackish, map the colors for the glyphs\n      Keep the color mapper around, shallow copy for settings\n      Fixed the normal matrix, now molecules look much better\n      Make it compile on Linux/X again\n      Bring over the Cocoa classes for Mac\n      Intel GLSL compiler is much fussier about type...\n      Removed the vtkFiltersCore dep\n      Removed vtkRenderingOpenGL as a dep now too!\n      Made vtkRenderingOpenGL2 independent of vtkRenderingOpenGL\n      The PainterDeviceAdaptor is abstract, can be NULL\n      Rename vtkOpenGL2* -> vtkOpenGL*\n      Very judicious use of sed, vtkOpenGL2* -> vtkOpenGL*\n      Added a concept of backends, added OpenGL and OpenGL2\n      File moves necessary to create a context backend\n      Context OpenGL and OpenGL2 backends\n      Some minor tweaks to get the tests passing again\n      Some modules only in groups if correct backend selected\n      Missed these OpenGL2 variants with the mass rename\n      Brought more of the OpenGL module logic over\n      OpenGL and OpenGL2 are mutually exclusive\n      If enabled, always override in OpenGL 2\n      Unused include for a file that was deleted\n      Disable multitexturing in Geovis class\n      Moving rendering tests to more appropriate places\n      More test moves into more appropriate locations\n      Removed the TDx classes from OpenGL 2\n      Only enable backends for interface modules being built\n      Disable test for render widget\n      Changed the default CDash URL for VTK\n      Move several TEST_DEPENDS to switch on backend\n      Create object factory CMake file, move vtk_add_override\n      Now generate the object factory files in a function\n      Revert \"updated baseline images\"\n      Revert \"updated baseline image\"\n      Some dependency updates now vtkRenderingContext2D is abstract\n      Don't exclude the module from wrapping - initialization\n      Made the label tests pass again!\n      Make TCL wrapping happy - no numbers in module names\n      Added include for std::string\n      Save the rendering backend used to the config file\n      Avoid early termination when collecting actors\n      vtkOpenGLContextActor should subclass vtkContextActor\n      One of the tests needs a context device to render\n      Removed unused variable - used in subclasses\n      These classes are abstract, fix smoke tests\n      Fix for Windows mangling issue\n      Must be marked WRAP_EXCLUDE too for Tcl smoke tests\n      Reduce the number of renders (avoid time outs)\n      Move device adapter initialization to the OpenGL module\n      BUG: Make selections more permanent, linked to object\n      STYLE: Some basic style fixes\n      Removed sorts as the inputs were already sorted\n      Added a test to exercise bar graph selection\n      Remove the wrap exclusion at the module level\n      More exclusions, avoid setting ABSTRACT twice\n      TCL doesn't like numbers in module names\n      Comment out the animated PDB renders\n      CMake's exec_program is deprecated, revert back\n\nMetaIO developers (1):\n      MetaIO 2014-07-09 (53aa417f)\n\nNicole Aucoin (1):\n      BUG: fix null pointer crash in view to world with no active camera\n\nPatrick O'Leary (1):\n      added paraviewweb widget for catalyst workbench\n\nPaul Edwards (2):\n      Fix for polyhedron cells.\n      Bug fix for dataset surface filter.\n\nRobert Maynard (15):\n      Update Dax Accelerator to use the new tll signature.\n      Update the Dax Accelerator to use the new dispatcher classes.\n      Correct warnings about negative unsigned constant values.\n      Properly implement the factory for the dax filters.\n      EnSight Binary uses 64bit longs so explicitly use those instead of long.\n      Netcdf now handles different directories for c and cxx bindings.\n      Improve the performance of vtkDataArray::ComputeScalarRange.\n      Improve the performance of vtkDataArray::ComputeVectorRange.\n      Move all free functions in vtkDataArray into an anonymous namespace.\n      Update ComputeVectorRange based on gerrit feedback.\n      Update DataArray and DataArrayTemplate to use vtkTypeTraits.\n      Correct ComputeScalarRange when dealing with multiple components.\n      Improve ComputeScalarRange when we have a single component.\n      Correct an issue with converting dax data to vtk polydata.\n      Refactor GetRange to compute all ranges at the same time.\n\nSandeep Menon (1):\n      vtkOBJReader: accept relative indices in OBJ files\n\nSankhesh Jhaveri (12):\n      BUG: Fix failing EnSightBlow5ASCII tests\n      BUG: Turned multisampling OFF for certain tests failing on linux with ATI\n      Fixed multisampling issues for some tests on ATI\n      ENH: Script to generate API differences between two git revisions\n      ENH: Added test for vtkImageCroppingRegionsWidget to improve coverage\n      ENH: Enable selection of translucent geometry\n      BUG: VTK_JAVA_SOURCE_VERSION to accomodate different java versions\n      Re-enabling tests disabled during modularization for Interaction/Widgets\n      BUG: Duplicate class definition in TestSeedWidget2\n      BUG: Duplicate class definition of vtkSeedCallback2\n      Additional baseline for TestAreaSelections\n      BUG: Border visibility from underlying vtkScalarBar actor\n\nScott Wittenburg (9):\n      Added code to draw current selection rectangle in viewport.\n      Added code to support a cache option for filebrowser widget.\n      Added canvas based image zooming and panning capabilities.\n      Fixed a null reference by surrounding the call with a check.\n      Support faster configuration times by checking dependencies at runtime.\n      Changed to make tests run serially, async nature was causing collisions.\n      Replace an import which disappeared and broke all dashboard web tests.\n      Updating to Autobahn python version 0.8.13 to get http long poll endpoints.\n      Added latest Autobahn JS (0.9.4) to support pvweb authentication.\n\nSean McBride (47):\n      bug #14418: Remove addition of \"-Wno-deprecated\" compiler flag\n      Fix clang analyzer warning about passing null to strcmp\n      Fixed clang analyzer warning about passing null to memcpy\n      Fixed clang analyzer warning about reading uninitialized memory\n      Fixed clang analyzer waring about a dead store.\n      Fixed clang analyzer warning about dead store\n      Fixed clang analyzer warning about dead store.\n      Fixed clang analyzer warning about dead store.\n      Fixed clang analyzer warning about dead store.\n      Fixed clang analyzer warning about dead store.\n      Fixed clang analyzer warning about 2 dead stores.\n      Fixed clang analyzer warning about dead store.\n      Fixed clang analyzer warning about reading past an array.\n      Fixed several clang analyzer warnings.\n      Fixed clang analyzer warning about reading uninitialized memory.\n      Fixed clang analyzer warning about dead store to 'pd'.\n      Fixed clang analyzer warning about passing null to memcpy.\n      Fixed clang analyzer warning about dead store to 'index'.\n      Fixed clang analyzer warning about dead store to 'bestTime'.\n      Workaround clang analyzer warning by creating temp variable.\n      Fixed clang analyzer warnings about dead stores.\n      Misc cleanup of code nearby clang analyzer warnings.\n      Fixed clang analyzer warnings about dead stores.\n      Fixed clang analyzer warning about dead store at very end of method.\n      Fixed clang analyzer warning about dead store to 'itr'.\n      Fixed clang analyzer warning about dead store to 'cptr'.\n      Fixed null deref found by clang analyzer\n      Fixed clang analyzer warnings about dereferences\n      Suppress clang analyzer warning\n      Fixed clang analyzer warning about null deref\n      Fixed clang analyzer warning about reading uninitialized data.\n      Fixed infinite recursion in vtkBitArray::RemoveFirstTuple()\n      Improved code coverage of vtkScalarsToColors by adding more tests\n      Added tests for a few uncovered vtkMatrix3x3 methods\n      Fixed error in vtkFiltersCoreCxx-TestClipPolyData test\n      Removed -fobjc-gc from VTK_REQUIRED_OBJCXX_FLAGS\n      Various Cocoa improvements and fixes\n      Fixed a bunch of clang -Wabsolute-value warnings\n      Removed all uses of deprecated NSOpenGLPFACompliant\n      Assume UTF8 for vtkCarbonRenderWindow::SetWindowName\n      Remove unnessary 'if' before 'delete[]'\n      Add #error when trying to build as Cocoa ARC\n      Fixed confusing indentation, no behaviour change\n      Fixed unused variable warning in release\n      Rewrote vtkCoreGraphicsGPUInfoList to not use deprecated API\n      Removed checks for antique Borland versions\n      Changed public API of vtkGPUInfo to return vtkTypeUInt64 for memory sizes.\n\nSebastien Jourdain (55):\n      Add catalyst web widget into VTK\n      Add NaN support in web chart rendering\n      Add a resampling filter\n      Add JSON writer for ImageData\n      Extend vtkImageMapToColors to support Mask color and Non Active Scalar input\n      Use / for path separator to prevent Windows related issue with escape char\n      Improve implementation of Catalyst viewer\n      Add image resampler catalyst web widget\n      Remove test dependency to data when not needed\n      Remove usage of the keyword with to allow old python\n      Add new set of catalyst web widgets\n      Attempt to handle some system raise condition\n      Add catalyst web composite widget\n      Better composite catalyst web widget\n      better UI for catalyst re-sampler web widget\n      Various VTK-web improvement\n      Fix vtkweb catalyst css\n      Add cost information in workbench analysis\n      Improve web compositing for dynamic interaction\n      Properly handle background selector visibility\n      Fix composite rendering widget for search\n      Add sorting capabilities\n      Refresh workbench UI and workflow\n      Fix Composite Javascript for WebKit\n      Improve ParaView cinema UI\n      Improve basic search in web-catalyst\n      Fix catalyst web - cost time computation\n      Improve catalyst web UI\n      Catalyst web: Minor Web UI change\n      Catalyst-web: Improve composite search experience\n      Add image width column\n      Add cost estimate for Catalyst Web\n      Catalyst-Web estimate UI fix\n      Change catalyst-web analysis API to expect full URL\n      Fix center of rotation for WebGL renderer\n      Fix WebGL background orientation\n      Fix basic catalyst viewer with theta\n      Add runtime libraries on Windows for Java binary package\n      Fix several catalyst web UI issue\n      Add configuration pass to Catalyst PVW workflow\n      Add support for mobile device interaction\n      Catalyst Web - Composite improvement\n      Catalyst web\n      Add new rendering class API based on vtkPanel class\n      Remove @Override annotation to prevent compilation issue on old Java compiler\n      Upgrade autobahn version to 0.8.9\n      Upgrade Twisted version to 14.0.0\n      Upgrade ZopeInterface version to 4.1.1\n      Add SixPython module for Autobahn dependency\n      Update Autobahn/JS library version\n      Update VTK Web Python code to handle WAMP v2\n      Update Web applications to support new protocol API\n      Fix python for vtkweb\n      Allow arbitrary WebSocket endpoint\n      Add bottstrap3 + pv lib in loader\n\nShawn Waldon (2):\n      Add a smartpointer for PyObjects\n      Format comments according to VTK stlye guide\n\nShinya Onogi (1):\n      fix_GPU_resource_handling\n\nThomas Vaughan (1):\n      Set origin and spacing in vtkSurfaceReconstructionFilter. Ref: Mantis 0002826.\n\nTristan Coulange (5):\n      BUG: fix some xdmf writer crashes\n      BUG: Add a missing include for VS 2013\n      Add support for original ids for generic dataset\n      BUG: fix xdmf test failure\n      BUG: Fix the quads evaluate location\n\nUtkarsh Ayachit (31):\n      Adding a new test for TestSocketCommunicator.\n      Added test to test vtkSynchronizedRenderers.\n      Deprecate vtkOpenGLPolyDataMapper.\n      Fix segfault with TestSetGet.\n      Fix build issues with deprecated vtkOpenGLPolyDataMapper.\n      Add a delay between process launches.\n      Fixed mismatches cell arrays in vtkPStreamTracer.\n      Added ability to probe filter to allow disabling of passing field data.\n      Add support for empty strinngs in SetInputArrayToProcess.\n      Make it possible to override ClampPos.\n      Remove OpenGL error checks that were causing errors.\n      BUG #14244: Fix stereo image captures.\n      Add helper method to convert from SelectionField to AttributeType.\n      Fix appending of scalar arrays.\n      Fix DataSet reference in when input array is passed to output.\n      Avoid exceptions on StringArrays.\n      Fixed exceptions with older numpy version.\n      Cleanup MPI controller properly.\n      vtkExtractSelectedRows only works with IdTypeArray.\n      BUG #14828: Keep surface color from interacting with scalar color.\n      Handle append scalar in CompositeDataSetAttributes.\n      BUG: Fixed opacity mapping when scalar array is vtkUnsignedChar.\n      BUG #14813: Fix range reported for mode shapes.\n      BUG #14599: Handle double values properly.\n      Fix issue with empty arrays with numpy 1.2.1.\n      Don't glyph masked points in vtkUniformGrid.\n      BUG: Fix invalid return value check in vtkClientSocket.\n      vtkScalarBarRepresentation doesn't call Superclass.\n      Fixed logic to work when an empty vtkSelection is passed.\n      Fix handling of empty selection on ParallelCoordinates.\n      Fixed issue with selection frame line style.\n\nWill Schroeder (7):\n      Disabling translation and scaling now works.\n      Added the ability to specify a clip tolerance.\n      Fixed bug causing plane to disappear on boundary.\n      InsertNextCell and related method now return the proper vtkIdType.\n      Create vtkPolyData instead of vtkUnstructuredGrid when passing points.\n      Extended filter to support culling unused points.\n      Added ability to control alpha shape output\n\nXDMF Developers (3):\n      export xdmf for import into vtk\n      export xdmf for import into vtk\n      export xdmf for import into vtk\n\nXabi Riobe (1):\n      BUG: The method vtkClipPlanesPainter::UpdateBounds must not be implemented.\n\nZack Galbreath (25):\n      fix lingering off-by-one error\n      new writer: vtkPhyloXMLTreeWriter\n      attempt to silence \"possible loss of data\" warning\n      improve the thoroughness of TestPhyloXMLTreeWriter\n      add baseline directory\n      get the baseline file's path from the command line\n      add option to write XML to string instead of file\n      fix failing tests revealed by gerrit\n      fix the format of PhyloXML references\n      fix blank newline in XML output\n      vtkXMLReader can now read from an input string\n      new class: vtkPhyloXMLTreeReader\n      consolidate tests for PhyloXML\n      silence unused parameter warning\n      change signatures for wrapping\n      copy row names from R to vtkTable\n      do not assume 1st column holds row names\n      fix failing SetGet test forvtkHeatmapItem\n      preserve R data.frame row names\n      break vtkRCalculatorFilter's input/output symmetry\n      style cleanup\n      add SSL support to VTKWeb server\n      fix potential segmentation fault\n      change the way we shut down the R interface\n      fix failing R tests reported by CDash\n\nxabi riobe (4):\n      Fix memory leak in vtkPNGWriter when OutOfDiskSpaceError\n      Initialize row_pointers\n      Fix numerical precision problem in vtkCellLocator::IntersectWithLine\n      Add default value for argument\n\ngit-svn-id: http://svn.slicer.org/Slicer4/trunk@23622 3bd1e089-480b-0410-8dfb-8563597acbee","jcfr",true],["9d87f17eabfa0a0f8725d3d11770a5c604dc938f","bf7cfb42f8f4a2fa2fa486ead0fb19db05b7cb3c@3bd1e089-480b-0410-8dfb-8563597acbee","ENH: Remove slice annotations popup startup dialog.\n\nFollowing discussing on the mailing list [1], the\nadditional startup dialog (originally introduced\nby r23612) is rather confusing and is removed by this\ncommit.\n\n[1] http://slicer-devel.65872.n3.nabble.com/Slice-annotations-comments-tp4032290p4032333.html\n\nFrom: Alireza Mehrtash <mehrtash@bwh.harvard.edu>\n\ngit-svn-id: http://svn.slicer.org/Slicer4/trunk@23623 3bd1e089-480b-0410-8dfb-8563597acbee","jcfr",true],["c0d5b82416646284b917daa1dde68f6524a70991","bf7cfb42f8f4a2fa2fa486ead0fb19db05b7cb3c@3bd1e089-480b-0410-8dfb-8563597acbee","BUG: Fix qSlicerPersistentCookieJarTester\n\nCookie file is not expected to exist.\n\ngit-svn-id: http://svn.slicer.org/Slicer4/trunk@23624 3bd1e089-480b-0410-8dfb-8563597acbee","jcfr",true],["965585f1140f4985c7723809d5bc6519d8c74dda","bf7cfb42f8f4a2fa2fa486ead0fb19db05b7cb3c@3bd1e089-480b-0410-8dfb-8563597acbee","BUG: Enable VTK_ENABLE_KITS only on MacOSX. Issue #3809\n\nOn Linux, enabling VTK_ENABLE_KITS prevent the vtk package from\nbeing properly imported from an install tree.\n\nFor example, the \"vtk.vtkTextActor\" is not available after starting\nSlicer from an install tree. On the other hand, after Slicer is started,\ndoing the following allow to access the 'vtkTextActor':\n\nimport vtk.vtkRenderingKit\nvtk.vtkRenderingKit.vtkTextActor\n\ngit-svn-id: http://svn.slicer.org/Slicer4/trunk@23625 3bd1e089-480b-0410-8dfb-8563597acbee","jcfr",true]],"size":7,"ref":"refs/heads/master","head":"965585f1140f4985c7723809d5bc6519d8c74dda"}