test
Merge branch 'master' of https://github.com/sdanzige/cmonkey-python
using play 2.0.4
adjusted set enrichment to latest cmonkey class interfaces
more flexible setup for rembrandt runs
adjusted rembrandt setup
ignore missing motif values in cluster viewer
make.seqs.py: feature.id is now a data member, not a method
integrated reseeding of 0-sized clusters
oops, referred to non-existing ratio matrix
ratios file is written as compressed file by default
JSON result files are now gzip compressed by default
caching/pickling of results in scoring functions can now be fine-tuned
weeder setup
oufactored loader function to cmonkey-python.R
runlogs converted to be output to sqlite database
run log is now read from SQLite database
stats are now written to SQLite
cluster viewer reads stats from SQLite now
run info is now stored in SQLite