New "loop" for "treebest best" in case the filtering is too aggressive
Use dbIDs instead of stable IDs in codeml
Config file to run protein-trees at the EBI
Added options to convert
Added content options
Config file for the WormBase Parasite pipeline
Merge remote-tracking branch 'ensembl-github/release/75' into release/76

* ensembl-github/release/75:
  Config file for the WormBase Parasite pipeline
  Config file to run protein-trees at the EBI
  Use dbIDs instead of stable IDs in codeml
  New "loop" for "treebest best" in case the filtering is too aggressive

Conflicts:
	modules/Bio/EnsEMBL/Compara/RunnableDB/GeneTrees/TreeBest.pm
Merge branch 'release/76'

* release/76:
  Config file for the WormBase Parasite pipeline
  Added content options
  Added options to convert
  Config file to run protein-trees at the EBI
  Use dbIDs instead of stable IDs in codeml
  New "loop" for "treebest best" in case the filtering is too aggressive