--hist option in overlap module
capturing output of native modules, logging improved
verification script supports both links and ord format
ambigious fasta characters
added two scripts, help improved
copyright notice fo scripts
fixed tilde recognition in config paths, tree parser now accepts float values in exp format
a script for comparing two assemblies
something changed
file mode change
Merge branch 'devel' of github.com:fenderglass/Ragout into devel
new version of assemblies comparison script + refactoring
more refactoring
comparison script works better, new alignment representation
rest scripts moved to right alignmet format
block parameter added
rearrangement prediction turned off
nochain