merge dev_5_0 -D org: PR 2108 (release-src includes bioformats version metadata)
merge dev_5_0 -D org: PR 2187 (Server restart)
merge dev_5_0 -D org: PR 2198 (Imagej omero)
merge dev_5_0 -D org: PR 2220 (Batch download original files 12137)
merge dev_5_0 -D org: PR 2242 (Use mklink under Windows)
merge dev_5_0 -D org: PR 2283 (Assist #11660: Add method for user creation based on LDAP username)
merge dev_5_0 -D org: PR 2309 (Add debugging of NPE in InteractiveProcessorI)
merge dev_5_0 -D org: PR 2310 (Remove cut link 11882 (rebased onto dev_5_0))
merge dev_5_0 -D org: PR 2312 (OMERO.matlab: add utility function to load channels)
merge dev_5_0 -D org: PR 2314 (Birdeyeview bugs (rebased onto dev_5_0) )
merge dev_5_0 -D org: PR 2317 (Flake8 fixes of integration tests)
merge dev_5_0 -D org: PR 2332 (Flake8 cleanup on omeroweb/webstart (dev_5_0))
merge dev_5_0 -D org: PR 2337 (New tagging dialog (dev_5_0))
merge dev_5_0 -D org: PR 2339 (Tagging dialog)
merge dev_5_0 -D org: PR 2351 (OMERO.web show extensions)
merge dev_5_0 -D org: PR 2358 (Fix port on interactive login (Fix #12228))
merge dev_5_0 -D org

Repository: openmicroscopy/openmicroscopy
Excluded PRs:
  # PR 2353 joshmoore 'CLI table styles' (status: pending)
  # PR 2228 jburel 'Connection scifio' (label: exclude)
Already up-to-date.

Merged PRs:
  # PR 2108 rleigh-dundee 'release-src includes bioformats version metadata'
  # PR 2187 joshmoore 'Server restart'
  # PR 2198 jburel 'Imagej omero'
  # PR 2220 will-moore 'Batch download original files 12137'
  # PR 2242 joshmoore 'Use mklink under Windows'
  # PR 2283 bpindelski 'Assist #11660: Add method for user creation based on LDAP username'
  # PR 2309 joshmoore 'Add debugging of NPE in InteractiveProcessorI'
  # PR 2310 will-moore 'Remove cut link 11882 (rebased onto dev_5_0)'
  # PR 2312 sbesson 'OMERO.matlab: add utility function to load channels'
  # PR 2314 aleksandra-tarkowska 'Birdeyeview bugs (rebased onto dev_5_0) '
  # PR 2317 ximenesuk 'Flake8 fixes of integration tests'
  # PR 2332 knabar 'Flake8 cleanup on omeroweb/webstart (dev_5_0)'
  # PR 2337 knabar 'New tagging dialog (dev_5_0)'
  # PR 2339 jburel 'Tagging dialog'
  # PR 2351 chris-allan 'OMERO.web show extensions'
  # PR 2358 joshmoore 'Fix port on interactive login (Fix #12228)'

Repository: openmicroscopy/bioformats
Excluded PRs:
  # PR 1016 ctrueden 'Use pom-scijava as parent' (label: exclude)
Already up-to-date.

Merged PRs:
  # PR 1018 melissalinkert 'Flex: fix support for new file naming scheme'
  # PR 1061 melissalinkert 'Fix 5D Imspector support'
  # PR 1062 melissalinkert 'DICOM: expand sequence reading to include known sequences'
  # PR 1064 melissalinkert 'SVS: store the PhysicalSizeX and PhysicalSizeY attributes (rebased onto dev_5_0)'
  # PR 1066 melissalinkert 'Fix file handle/line ending issues so that tests pass on Windows (rebased onto dev_5_0)'

Repository: ome/scripts
Already up-to-date.

Repository: openmicroscopy/ome-documentation
Already up-to-date.

Merged PRs:
  # PR 749 hflynn 'Adding API doc links to OMERO docs front page'
  # PR 753 rleigh-dundee 'ant: Support API doc generation'
  # PR 756 rleigh-dundee 'Search.txt: Correct use of unicode quotes'

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