Fixing mistake in CISM-Albany build on titan instructions *.txt file.
Added ability to read the volume attribute from genesis files.

The volume attribute is present only for sphere meshes, which are
used for peridynamics.

Added the GatherSphereVolume evaluator, which makes the element
volumes available to the PeridigmForce evaluator.
Added ability to send proper block ids to Peridigm.
Incremental commit toward Peridigm coupling.

Created a PeridigmManager to handle the interface between
Albany and Peridigm.  It is a singleton that is called
directly from Albany::Application for initialization,
updating the current displacements (i.e., copying to the
Peridigm data structures), and computing the peridynamic
internal force.  Nodal forces can they be queried downstream
from an evaluator.  The initial implementation will function
only for Residual evaluations.
Rename Transient SG test problem
removing "FAIL" from name now that is passes (thanks Eric).
Fleshing out PeridigmManager.
Merge branch 'master' of software.sandia.gov:/space/git/Albany
More progress on Albany-Peridigm coupling.

Hooked up plumbing to connect the Albany state manager
with the corresponding Peridigm data structures.  If
Peridigm output is requested in the input deck, space
for the data is now allocated on the Albany side and
the values are filled in the PeridigmForce evaluator
(the data is copied from the Peridigm data structures
to the Albany data structures).  The data then appears
in the Exodus output file.

Numerous things are hard-coded and will need to be
generalized.

The PeridigmStaticElasticity3D example problem appears to
run correctly at this point, at least in serial.
Added journal file, genesis file, and input deck for new Albany-Peridigm coupling test.

The new test contains both a peridynamics block and a standard FEM block.
Progress on Albany-Peridigm coupling.

PeridigmProblem can now handle a sphere mesh (peridynamics)
or a standard FEM mesh (classical elasticity), and solve
simple statics problems using either Matrix-Free or
Finitie Difference as the Piro Jacobian Operator.  In
both cases, the PeridigmForce evaluator is not required
to compute a tangent (which is good, 'cause it can't).

PeridigmProblem is not working properly for meshes that
contain both sphere elements and standard FEM elements.
The nonlinear solver doesn't converge, probably indicating
a bug.

Added several input decks and meshes to exercise the
scenarios described above.
Fixed bug in PeridigmProblem related to reading the input deck.

The Elastic Modulus and Poissons Ratio were not being properly fed
to the ElasticModulus and PoissonsRatio evaluators.  This caused
them to use their default values, which are 1.0 for both Young's modulus
and Poissons ratio.

The tests containing both a peridynamics block and a classical
elasticity block now run correctly.  Prior to the bug fix, they
were failing to converge because the elastic moduli for the
two bars differed by eleven orders of magnitude, plus the Poisson's
ratio was bogus for the FEM bar.
Some initial work to enable peridynamic partial stress calculations.
update PNP example to allow for variable "number of species".
Its Friday, make a sandbox for Tom.
Missed the commit of the CMake file.
Add Old and New Tracer arrays.  Default Atmosphere is to copy one to the other.
New 1D x scalar advection.
XScalarAdvection 1D test
Evaluator for XScalarAdvection Residual.
1D scalar advection test run in XScalarAdvection.
Working with James!