this fixes the bug in stampede not working (hopefully). the issue was that the intensity arrays were reals and not doubles -- they really did need to be doubles, reals just were not precise enough. everything on stampede and aci was the exact same up until the mpi reduce calls, and after that the values changed. changing the reals to doubles fixed this, which makes some sense to me. hopefully it doesnt slow down the calculation any, this is definitely the right way to do it.
I am still going to run a new run on both ACI and Stampede using the new code (small model) and make sure they are identical.
Merge branch 'master' of https://github.com/refreshx2/hrmc
i guess this branch was behind. it was probably just the pdf i added