a few functions before making the Sequence class
first incarnation of the frameshift generator
finalised generation of frameshift functions
the Sequence class
added methods: generate_random_sequence(), colour_frame()
first rendition of Sequence class; test_class.py used to test Sequence class
detecting frameshifts: beginning
made clear inheritance of Sequence classes; make nucleotide index matrix
included a binary_frame() method to the Sequence class
draw a codonframematrix
implemented methods to traverse the binary codon matrix: dist_to_stop(), get_best_frame(), show_binary_codon_matrix(), set_binary_codon_matrix()
completed extremely buggy method to detect frameshifts
numerous changes; will be heading in a new direction
Merge branch 'master' of https://github.com/polarise/BioClasses