Had to re-fix
I merged and corrected the LOOCV conflict

Merge branch 'master' into interface_hotfix

Conflicts:
	PlanningValidation/analytic/unused/LOOCV_t_test_DiceTemp.m
Made improvements for the *.in.* file writer.
I added a new script that will take a DAKOTA *.in file and make a new, identical one that has new paths.
Removed files from repo