Updated ode package to work with Mavericks. I don't even know how it worked at all before

Also fixed some outstanding bugs with the install scripts so that the Vanilla StochKit packages can be used

Conflicts:
	ode.tgz
	run.fedora.sh
	run.linux.sh
	run.mac.sh
Removed the ode tarball (accidentally included)
Process killing now works as intended. Finally.
Updated the run scripts to fix some problems
Create .gitignore
Create .gitmodules
Bumped version number
Merge branch 'master' into develop

Conflicts:
	.gitignore
	RELEASE_NOTES
	VERSION
	app/backend/backendservice.py
	run.fedora.sh
	run.linux.sh
	run.mac.sh