Octave: changle angled includes to quote includes.

This makes it possible for other software to build upon Octave,
e.g., Shogun.

Closes #1561.
mira 4.0.2: Add doi and tag
allpaths-lg 50378: Change single quotes to double
trinity r20131110: Change single quotes to double
amos 3.1.0: Add doi and tag
barrnap 0.5: Remove require "formula"

Closes #1570.

Signed-off-by: Shaun Jackman <sjackman@gmail.com>
barrnap: add 0.5 bottle.
abyss-explorer 1.3.4: Remove require "formula"

Closes #1569.

Signed-off-by: Shaun Jackman <sjackman@gmail.com>
abyss-explorer: add 1.3.4 bottle.
cerulean 0.1: Remove require "formula"

Closes #1571.

Signed-off-by: Shaun Jackman <sjackman@gmail.com>
cerulean 0.1: Requires numpy
gingr 1.0.1: New formula

Gingr is a flexible platform for visualizing and compressing
alignments and phylogenetic trees.

Closes #1564.

Signed-off-by: Shaun Jackman <sjackman@gmail.com>
Octave: disable documentation by default.

Documentation requires a LaTeX system.

Closes #1592.

Signed-off-by: Dominique Orban <dominique.orban@gmail.com>
octave: add 3.8.1_1 bottle.
Octave: Relocate bottle block.
edirect 2.00: Remove require "formula"

Closes #1572.

Signed-off-by: Shaun Jackman <sjackman@gmail.com>
edirect: add 2.00 bottle.
fsa 1.15.9: Remove require "formula"

Closes #1573.

Signed-off-by: Shaun Jackman <sjackman@gmail.com>
fsa: add 1.15.9 bottle.
glimmerhmm 3.0.2: Remove require "formula"

Closes #1575.

Signed-off-by: Shaun Jackman <sjackman@gmail.com>