fixed bash-comp (bug #526320)

Package-Manager: portage-2.2.8-r2
Merge branch 'master' of ssh://github.com/gentoo-science/sci
travis.yml: use newer portage version
net-libs/xrootd: version bump and fix bug 521496

1. Version bump of xrootd to 4.0.4.
2. Remove -Werror from CXXFLAGS. While it doesn't cause problem in
my case, it may cause them for other users with other CXXFLAGS.
sync with gx86

Package-Manager: portage-2.2.8-r2
sci-physics/root: Fix compilation with USE="mysql" wrt bug #523996; fix die_compiler message

Package-Manager: portage-2.2.8-r2
Moved to tree

Signed-off-by: Justin Lecher <jlec@gentoo.org>
Merge remote-tracking branch 'github/master'

* github/master: (66 commits)
  sci-physics/root: Fix compilation with USE="mysql" wrt bug #523996; fix die_compiler message
  sync with gx86
  net-libs/xrootd: version bump and fix bug 521496
  travis.yml: use newer portage version
  fixed bash-comp (bug #526320)
  version bump
  sci-chemistry/pymol: Patch included upstream
  sci-chemistry/pymol: Fix broken plugin listing
  dev-python/ccdproc: Version bump to 0.2.1
  Thanks to kiwifb for reporting https://github.com/gentoo-science/sci/issues/280 - Fix openblas: discrepancy between installed libraries and .pc file.
  Thanks to kiwifb for reporting https://github.com/gentoo-science/sci/issues/280 - Fix openblas: discrepancy between installed libraries and .pc file.
  sci-chemistry/pymol: Fix upstream buildsystem
  The fix for Bug 524612 failed in src_install building openblas from git. The fix is to move applying the patch to src_compile after building the library, then remove config.h and config_last.h; make config.h - ignoring the spurious warning; then cp config.h to config_last.h.
  Fix Bug 524612 - [science overlay] sci-libs/openblas-0.2.11 - Assembler messages: ../kernel/x86_64/gemm_kernel_8x4_barcelona.S:451: Error: missing ')', thanks to Juergen Rose, Jean-Francis Roy and Steven Trogdon for reporting. The problem was that applying the -0.2.11-openblas_config_header_same_between_ABIs.patch patch in src_prepare() causes build failures on assembler code as the assembler does not understand sizeof(float). So delay applying the patch until src_install(). Bump openblas to 0.2.12.
  dev-python/ccdproc: Version bump to 0.2.1
  dev-cpp/eigen: version bump
  sci-chemistry/pymol: Import tree changes
  version bump
  sys-cluster/openmpi: bump
  sys-cluster/openmpi: bump
  ...
sci-chemistry/freeon: Drop obsolete versions

Package-Manager: portage-2.2.14
Drop liver version

Signed-off-by: Justin Lecher <jlec@gentoo.org>
Merge remote-tracking branch 'github/master'

* github/master:
  sci-chemistry/freeon: Drop obsolete versions
  Moved to tree
  sci-physics/root: Fix compilation with USE="mysql" wrt bug #523996; fix die_compiler message
  sync with gx86
  net-libs/xrootd: version bump and fix bug 521496
  travis.yml: use newer portage version
  fixed bash-comp (bug #526320)
  version bump
sci-chemistry/pymol: Add missing PYTHON_USEDEP

Package-Manager: portage-2.2.14
sci-chemistry/pymol: Make it really multi py ABI ready; use internal apbs plugin

Package-Manager: portage-2.2.14
dev-perl/Lab-Instrument: Bump to EAPI=5

Package-Manager: portage-2.2.14
virtual/perl-encoding-warnings: Add new virtual

Package-Manager: portage-2.2.14
perl-core/encoding-warnings: Bump to EAPI=5

Package-Manager: portage-2.2.14
dev-perl/Lab-Tools: Bump to EAPI=5

Package-Manager: portage-2.2.14
dev-perl/Lab-VISA: Bump to EAPI=5

Package-Manager: portage-2.2.14
dev-perl/opal-client: Bump to EAPI=5

Package-Manager: portage-2.2.14
app-doc/blacs-docs: Bump to EAPI=5

Package-Manager: portage-2.2.14