wrappers end env for this
Added new directory for "BuildHMMProfiles" and "ComparaHMM" pipeline
update package definition
update package definition;code cleaning up
update package definition;code cleaning up
update package definition;code cleaning up
update package definition;code cleaning up
update package definition;code cleaning up
update package definition;code cleaning up
update package definition;code cleaning up
update package definition;code cleaning up
newly added to point to the MSA.pm specific for building profiles
update package definition;code cleaning up
update package definition;code cleaning up
new runnable that create fasta file of non-classify proteins
add runnable
update package definition;code cleaning up
new module that creates 2nd level HMMClassify jobs
update package definition;code cleaning up
update package definition;code cleaning up