Changes to directory structure in git repository, also added git tools directory
Fix bug on calc_root_fract.c and mtclim_wrapper.c, mtclim now read daily solar radiation
Update readme.txt

Initial readme text for the full VIC git repository
Update readme.txt

fixed text wrapping
fix bug in radiation input
Adjustments to previous bugfixes: 1)root_calc; 2)radiation in MTCLIM when radiation is read from file
Merge pull request #3 from homefc/bugfix/homero

Fix bug on calc_root_fract.c and mtclim_wrapper.c, mtclim now read daily...
third bug fix to same radiation input problem
Converted readme.txt to markdown and updated text
Merge pull request #5 from homefc/bugfix/homero

third bug fix to same radiation input problem

Just merging into the hotfix branch while tests/comments continue.
Fix input of specific humidity but no pressure
Final Qair input fix
Merge branch 'bugfix/homero' of https://github.com/homefc/VIC into hotfix/VIC_4.1.2.h
Merge branch 'hotfix' of https://github.com/UW-Hydro/VIC into hotfix/VIC_4.1.2.h
Updates for release of hotfix/VIC_4.1.2.h:

src/output_list_utils.c: moved from samples/ to src/ where it belongs.
src/initialize_atmos.c: Homero's original fix turned out to have an error, which I fixed.
src/calc_root_fraction.c, src/mtclim_vic.c, src/mtclim_wrapper.c: added comments describing modifications; not sure if this is necessary anymore but did it just to be safe and consistent with past practices.
src/global.h: Updated release version string.
Merge branches 'master' and 'hotfix/VIC_4.1.2.h'
Fix.
Updated to summarize the bug fixes contained in this hotfix.
Merge pull request #10 from tbohn/hotfix/VIC_4.1.2.h

Hotfix/vic 4.1.2.h
Fix to previous fix, to avoid overstepping bounds of zone_depths[] array.