Support junctions w/o a start-end (retained introns, effectively)
Better warning messages for qual values outside of scope
Added support for exporting failed junctions as well, bugfix in juncdiff
Made DataIO actually be little-endian. It was big, by mistake.
Updated PeekIS to allow for continuous "peeks" along the peek buffer.

As in...

a=peek(2)
b=peek(4)

this will ultimately end up peeking 6 bytes (a,a,b,b,b,b), not just
(0,1), and (0,1,2,3).

It only works for the size of the peek buffer though!
Small updates
Updated BamToFastq to be a FastqReader...
BAM files can be used now as a FASTQ read source...