LPS-43572 - Improve the location of some checkboxes in Asset Publisher's configuration page to make the configuration more user-friendly

Hey @mjbradford89,

Attached is an update for http://issues.liferay.com/browse/LPS-43572.  There is one issue where when we change these inputs to ```<aui:input>'s``` it does not save the changes anymore.  Can you take a look at why?  It might be related to some backend changes that we need to make, but let's see how far we can get with this.

Please let me know if you have any questions.  Thanks!