Merge pull request #1 from termMed/master

General renaming classes and parameters to support better documentation
Merge pull request #2 from termMed/master

Adding basic execution instructions in readme.md
Merge pull request #3 from termMed/master

Added module setting to retired rels
Add aceworkspace repository to pom.
Merge pull request #4 from termMed/master

Added capability to work with n files by type (concept, stated rels and
Create executable jar with maven.
Null check and logging loading relationship file.
Move log4j config to resources directory.
Merge remote-tracking branch 'upstream/master'