Updated the ProbABEL ChangeLog and INSTALL files to reflect the fact that Eigen is now a dependency for ProbABEL.


git-svn-id: svn://svn.r-forge.r-project.org/svnroot/genabel@1728 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
Moved the definition and implementation of the mlinfo class from data.{h,cpp} to mlinfo.{h,cpp}.
The remaining parts in data.{h,cpp} were the definition and implementation of the InvSigma class, so this change also renames data.{h,cpp} to invsigma.{h,cpp}.


git-svn-id: svn://svn.r-forge.r-project.org/svnroot/genabel@1729 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
Fixed an inconsistency in the naming of the alleles in the test.map file (compared to the test.mlinfo file) in ProbABEL's example and checks directories.


git-svn-id: svn://svn.r-forge.r-project.org/svnroot/genabel@1730 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
Fixed a couple of Style guide violations in ProbABEL.
Things like lines > 80 characters, superfluous empty lines, etc. Only changes in code layout.


git-svn-id: svn://svn.r-forge.r-project.org/svnroot/genabel@1731 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
Changed the way the raw strings were split across multiple lines. cpplint wasn't happy with the way I did it in r1731.



git-svn-id: svn://svn.r-forge.r-project.org/svnroot/genabel@1732 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
Ouch! an ugly piece of test code was still present in the previous commit. This fixes that.


git-svn-id: svn://svn.r-forge.r-project.org/svnroot/genabel@1733 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
ProbABEL: Added some more consts to function call arguments.


git-svn-id: svn://svn.r-forge.r-project.org/svnroot/genabel@1734 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
Changed the way ProbABEL prints not-a-numbers in its output from "nan" to "NaN", which is more common (and maybe the way IEEE 754 specifies it, see the forum message http://forum.genabel.org/viewtopic.php?f=10&t=879#p1840).


git-svn-id: svn://svn.r-forge.r-project.org/svnroot/genabel@1735 edb9625f-4e0d-4859-8d74-9fd3b1da38cb
Modified installation process to use custom compilations of openblas in combination with Automake.

git-svn-id: svn://svn.r-forge.r-project.org/svnroot/genabel@1736 edb9625f-4e0d-4859-8d74-9fd3b1da38cb