made writeChubukov place all files into a suffix output folder, removed suffixes from filenames themselves. made writeChubukovScript cd up, make and execute BP code, then go back into matlabFiles. made read_input read two arguments doTestInd2Sub and inputDir before other arguments, made all input files except input.txt read from inputDir. However, clever trick in that renameInputFiles.m now copies the input.txt from the suffix folder into the main directory, therefore can still functionally place all five input files for BP in a suffix folder. Finally, changed all hardcoded input handles from Chubukov to ChubukovData