therion 5.3.14 (new formula)

Closes #758.
blast: set dependency options

Dependencies are explicitly turned off or paths set to opt_prefix.

Closes #542.
SuperLU: new formula.

Thanks to @ysakamoto86
Closes #721.
snoscan 0.9b: New formula

Search for C/D box methylation guide snoRNA genes in a genomic
sequence
maker: Add an optional dependency on snoscan
viennarna: Requires X11 for RNAforester
mir-prefer 0.16: New formula

miR-PREFeR: microRNA PREdiction From small RNAseq data
maker: Add an optional dependency on mir-prefer
viennarna: ENV.deparallelize for make install
ASL: changes to use with linuxbrew.

Closes #857.
genometools: depends on pkg-config
wcslib 4.22

Closes #859.
samtools: Add DOI
opencv 2.4.9

Closes #865.
Closes #862.
lumpy-sv 0.2.1

Closes #864.
maker 2.31.4
abyss 1.5.1
maker: Add the DOI of MAKER2
maker: Add license info to caveats
ucsc-genome-browser 299