maybe this will work...
python interface
added test for aligner
graph align works with counting hash now (-hashbits)
added diginorm with error correction...doesnt work yet though :-/
blargghh...
added new graph align files
removed old files
added diginorm correct files
committing before I flip the scoring matricies
alignment code with coverage
removed probability-based scoring
pre localization
pre-removing print statements
read localization added
added error correction script
removed old error correction script
removed score
added tests for graph alignment
updated ec.py