Merge tag '2.6.5' into develop

Creating workflow 2.6.5
Adding in both parameter for workflow center and adding in gt-upload-download-wrapper dependency
added changes for parameterizing ref center and to use artifactory for gnos wrapper
commiting merge
Changes to get this to compile and create valid looking perl calls

Also changes to Perl script to pass in and use bundle dir and bundle
version
Changes to Perl script and fix for scalar number of arguments
Updating the URL for the bundle
Adding in new param
removing vcf-uploader now that it is in it own repository
Merge pull request #28 from SeqWare/feature/ajw-add-wrapper

Feature/ajw add wrapper
Merge branch 'release/2.6.3'