added Bio::ViennaNGS::MinimalFeature, Bio::ViennaNGS::Feature and Bio::ViennaNGS::FeatureChain in lib/Bio/ViennaNGS/Features.pm
added  lib/Bio/ViennaNGS/Features.pm
added lots of new features
added separate module files for Feature annotation; removed generic Features.pm
added stupid feature_test.pl file
Changes
Partial merge from branch fall: Added scripts/Bed2Bedgraph.pl, scripts/ExtendBed.pl, scripts/KmerAnalysis.pl, scripts/MEMExmlMotifExtractor.pl, scripts/TrimFastq.pl, and Perlmodules lib/Bio/ViennaNGS/Feature.pm, lib/Bio/ViennaNGS/FeatureChain.pm, lib/Bio/ViennaNGS/MinimalFeature.pm and updated lib/Bio/ViennaNGS.pm
Updates POD docu in scripts and extend_chain sub in lib/Bio/ViennaNGS.pm
updated MANIFEST
minor changes; updated POD
minor updates
minore updates
adjusted Joerg's scripts for inclusion in the master branch
Merge branch 'newfeatures'

	modified:   Changes
	modified:   MANIFEST
	modified:   lib/Bio/ViennaNGS.pm
	new file:   lib/Bio/ViennaNGS/Feature.pm
	new file:   lib/Bio/ViennaNGS/FeatureChain.pm
	new file:   lib/Bio/ViennaNGS/MinimalFeature.pm
	new file:   scripts/MEME_XML_motif_extractor.pl
	new file:   scripts/bed2bedGraph.pl
	new file:   scripts/extendBed.pl
	new file:   scripts/feature_test.pl
	new file:   scripts/kmer_analysis.pl
	new file:   scripts/trim_fastq.pl
	new file:   share/data1/NC_000913.3.chrom.sizes
	modified:   Changes
adjusted MANIFEST
adjusted version to v0.11
adjusted version to v0.11
updated Changes
updated README