erase everything
Basic rubygem
remove readme
Create separate class for each validation

+ separate class for each validation
+ separate class for each validation output
+ added test suite for the rubygem

Signed-off-by: Monica Dragan <monica.dragan@cti.pub.ro>
removed some unnecessary files
Delete blastQuery.rb

unnecessary file
one little copy paste bug on slope variable
Merge branch 'rubygem' of https://github.com/monicadragan/gene_prediction into rubygem
add orf validation test with start stop codons
ignores ~ files
Delete genevalidator.gemspec~
Delete test_validation_open_reading_frame.rb~
remove ununsed files
documentation
Fix small issues
- html output: added sort by column option + javascript
- tests: unit tests and sttaistical tests
- code refactoring - struct for Pair class
- generated documentation
- install.sh - installs the gem, runs tests, generares doc

Signed-off-by: Monica Dragan <monica.dragan@cti.pub.ro>
was integrated in Rakefile
will be updated
Add parent class for Validation Tests

* Workflow now: each validation is defined by 2 classes that extend:
- ValidatioReport - stores the output of the validation test and some methods used for data representation
- ValidationTest (run method must be overloaded, run must return ValidationReport class type,
 some fields have to be updated)
- each validation is added to a list of validations which is further processed for yaml/html/console visualization

* updated unit tests corresponding to the changes
* added in Rake file: build, doc, test fields

Signed-off-by: Monica Dragan <monica.dragan@cti.pub.ro>
add rescue for ReportValidationException
Delete GeneValidatior-0.1.gem