Sort builds by date_completed so things are consistent.
Clarified comments
Replace reserved function debug_file with debug_file_path.
add lsf_queue got Genome::Model::Event
should_use_alignment_pd if model's run_as =~ /^apipe/
add lsf_queue to AlignReads
pull queue param out of bsub_rusage (for events)
add lsf_queue to PrepareReferenceSequenceIndex event

The boundary between events and software results is not clear so this
mostly just makes more explicit what I believe was implicit.
use event's lsf_queue
CQID: does not require user to verify when running w/ inst data
Genome::Logger
move syslog dispatcher to TGI site
extract color_screen
fall back on non-color screen when STDERR is not a TTY
fall back on non-color screen when color package is not available
extract should_color_screen
add test
prototype logger to split messages (by type)

The goal would be to delegate UR::ModuleBase's *_message to this so that we can
send different types of messages to syslog than to the screen.  Log::Dispatch
enables this but log4perl does not.
Updated `genome` tab completion.
further patches to work with old/new versions of ggplot2