Move extraction from a package to the model

Refactored extracting a file from a package to the model, and added a
dependency on atool so it can handle more file formats.  Also, escape the
relative paths coming from the URL.
Add link to download pointer files

refs #5716

Add link to pointer files to Packages table.  Add download pointer file
URL.  Refactor extract and download request code to pull out the
section that returns a file stream, for use with the pointer file
downloads.