[TEST] fixed test dependencies and output names of OpenSwathAnalyzer_test
[TEST,NOP] adapted checker to variable test locations and removed svn:keyword test
[TEST] added write_ctd test for all topp and util tools

 * the test should fail if the tools were not properly registered in ToolHandler
[NOP] disabled IDEvaluator CTD test in travis due to missing X server
[PYOPENS] setup.py as minimal as possible

    moved codegeneration and moving of files needed for
    pyopenms distribution to new file create_cpp_extension.py

    setup.py is now as minimal as possible, which provides errors when
    using pip and its dependency resolution mechanism.
[PYOPENMS] only one build target for pyopenms

    building files for distribution + building extension "in place"
    in one step. this is faster than seperate builds, as the
    c++ compiler and linker are only called once
[NOP] Merge branch 'develop' into feature/checker-test-fixes

Resolved Conflicts:
	src/tests/topp/CMakeLists.txt
[PYOPENMS] refactored build targets for pyopenms
[PYOPENMS, CLEANUP] reformatted pyopenms.cmake
[PYOPENMS, FIX] fixed dependency decl in pyopenms.cmake
[FIX] disable OpenMP again for ILPDCWrapper

- it was re-enabled in 0ce469d0ee54f70ee5848639f02537e5451ad44a however
  the underlying issue still does not seem to be solved.
- see also bug #595
[FIX,FEATURE] found blazingly fast toDouble() for Windows, making MGF parsing 700% more effective, so OMP can be removed. Should affect speed of many other parsers as well
[FIX] fixed missing std:: for vector

 * also applied uncrustify
Merge pull request #1 from aiche/MGF_fix2

[FIX] fixed missing std:: for vector
added missing index file for OMSSA test, which gets recreated when running the tool
Merge pull request #675 from aiche/feature/checker-test-fixes

Checker/Test fixes and adds test for CTD writing
added another comment to String::toDouble()
Merge branch 'MGF_fix2' of https://github.com/cbielow/OpenMS into MGF_fix2
[API,FEATURE,TEST] Improved fitting of models to mass traces

- new method "getValue" to evaluate the model at a point
- more robust estimation of initial parameters for Gaussian model (caveat: fitting may use more steps in some cases)
- adapted tests
[FEATURE,PARAM] added checks for elution model validity; changed settings of OpenSWATH feature finding