Updated database connection scheme.
Can now just include connections/connection.php from all files and change
which database to connect to in connections/connection.php
Fixed the @unkown section names.
Added 'text_section_name' column to text_section table.
Using text_section_type_id's would have missed about 20% of the text section names.
Better to just store the names we got from the atf file
Added population of name and name_reference tables to java parser