Added --precise flag to getStatistics.R script to increase precision of statistics.

We need this for the MiSeq... Ask Eddy de Boer (or Lennart or me) for more details.
Dirk's first commit
deleted a typo, hopefully this will fix the VariantCalling
Merge pull request #132 from RoanKanninga/master

deleted a typo, hopefully this will fix the VariantCalling
fixed fq.gz.md5 links + fix for when Barcode == None
Merge pull request #133 from RoanKanninga/master

fixed fq.gz.md5 links + fix for when Barcode == None
fixed the multiple projects issue, the wrong worksheet was used
Merge pull request #134 from RoanKanninga/master

fixed the multiple projects issue, the wrong worksheet was used
loading R/2.14.2 version for GATK/1.2-1-g33967a4 UnifiedGenotyper
Merge pull request #135 from Gerbenvandervries/master

loading R/2.14.2 version for GATK/1.2-1-g33967a4 UnifiedGenotyper
changed protocols, edited parameter tmpvariables to tmpfolders/files created by a function in the header
removed unused tmp folders
removed fi
Merge pull request #136 from RoanKanninga/master

changed protocols, edited parameter tmpvariables to tmpfolders/files cre...
changed a parameter
Merge pull request #137 from RoanKanninga/master

changed a parameter
new Chromosome merge, and variantspit protocol
parameterfile added for all exon and cgd targets analysis
Revert "new Chromosome merge, and variantspit protocol"

This reverts commit 7faf8a01027e47696d21dabe22f6cdd444326807.
Merge pull request #138 from Gerbenvandervries/master

parameter file added for merged all exon and CGD targets for 5GPM_gcc pipeline