Added "Extends" box (for plugin modules only) with link back to core module
Removed obsolete documention-generation code
Documenting usage of empty DESTROY methods
Experimental Blast code - never used
Added overview
Added documentation
Fixed some spelling errors
This returns no sequence if transcript id provided
Single gene legend on Alignments image. (Tweak)
Legends at bottom in Region comparison view.
Images on Multi-Region view.
Pics on Align Image.
Gene legend in sections.
Legend tweaks followup.
Allow species images to be turned off for genomes.
Transcript summary table UI improvements.
Moved some documentation inside corresponding methods where it can be found by edoc, and tidied up the code a bit
Moved 'DEPRECATED' method to bottom of module - it's three years old and probably not needed any more
Major refactoring of compara components to move big chunks of data-munging into Object
Temp. remove reg. ev. from gene summary (speed).