Update versions of jQuery/qtip and improve html display

Updates to generated html pages specifically:
* Generate valid html
* Make the index a frame view
* Update jquery/scrollTo/qtip2 to address issues #3,#4,#5 (better handling of screen edge and allow copy/paste from tooltip

Would prefer to continue downloading jquery on demand (possibly via webjars) rather than dumping it into src/main/resources if we can.