starting to put documentation inside
Adding jdoc documentation to all classes
Adding jdbDoc cooments
Merge remote-tracking branch 'upstream/master' into boiler4
Fixed typo in HistoBins.h
Merge remote-tracking branch 'upstream/master' into boiler4
removed boiler .cpp files
removed boiler .cpp files
Moved all boiler headers to /include/jdb/ for organization
Moved all jdblib headers into /include/jdb/ and merged in. Modified Makefile to fix change of location to include new dir

Merge remote-tracking branch 'upstream/master' into boiler4

Conflicts:
	src/Makefile
	src/app.cpp
Fixed bug where Logger global log level was not being used
Adding in RefMultCorrection class to make z vert based corrections
merged in fix to Logger, global log level
Added in the z corrections for ref mult
Merged in boiler and refMultCorrection changes