source-archive: Add command-line options
build: Add toplevel ant version target
source-archive: Add bioformats and openmicroscopy version logic
Fix classpath dependencies for missing service tests

Using formats-api.jar pulls in the ome-xml and jai dependencies, even
when they are excluded from the formats-bsd classpath.  If we use the
formats-api build directory instead, that prevents the extra
dependencies from being used.
merge dev_5_0 -D org -I include -E exclude: PR 911 (Remove, rename, and/or deprecate relevant classes)
merge dev_5_0 -D org -I include -E exclude: PR 918 (source-archive supports openmicroscopy source releases)