added setup.py. Note that it will not work currently, just an initial commit
finished first version of setup.py. Added MANIFEST.in so correct files are included with the build
Added MANIFEST.in so correct files are included with the build
use rST format instead of markdown
added link to github
made Note bold
read in long_description from README.rst
keep all the test data files
added base tabs objects. Changed opening file logic so tabs must implement a specific method to activate actions in the main window
Added Apache License
moved reading chimera files to it's own type, ChimeraReader
Use StrategyPattern, select how to handle the Baseline and Threshold at runtime. Also use the new ChimeraReader
Use new Parameters objects, Baseline and Threshold strategy patterns, and new ChimeraReader
use filereader's get_reader_from_filename if the user passes in a string
keep __init__ methods in documentation. Edited out some old translocationcode-python stuff
updated some docstrings. Renames some find_events and Parameters parameters
fixed plotting in event_finding_widget
removed unused imports
updated docstring for get_all_data
use python 2.7 docs for intersphinx-mapping