Refactoring
WIP : Working alignment option in pipeline (fasta->CLUSTALO->PhyML)
Working implementation of alignment and conversion.
Bug fixes. ClustalO and PhyML pipeline should be fairly sturdy.
First implementation of distance matrix calculation with clustalo. Warning : (almost) untested and unoptimized
Small fix in conversion pipeline
Major bug fix in pipeline when inputing pre-aligned sequences and calculating distance matrix. Small changes for consistency. Warning, needs refactoring
Final fix and test files for clustalo and phyml pipeline.
Added FASTA to geneSeqs tooltip
Forgot to re-add geneDistances after renaming...