Ah. That is taken care of here @ https://github.com/scikit-image/scikit-image/pull/990/files#diff-60254338249f657a0a83f98258a56bfeR6 , not sure if that is were we finally want it there.

@ahojnnes yes, it pushes for only merged stuff. you can find details here @ http://benlimmer.com/2013/12/26/automatically-publish-javadoc-to-gh-pages-with-travis-ci/ which is what i looked up. i'll be happy to clarify anything further.