add rat to bowtie2 index
Merge pull request #623 from teharrison/develop

add rat to bowtie2 index
added support for deep nesting of parameters
updated api2html to catch more stuff
fixed typos
fix broken ftp download links
perl syntax fix
remove unneeded text
Merge pull request #626 from teharrison/develop

download page fix / update
updated description
Merge branch 'develop' of github.com:MG-RAST/MG-RAST into develop
removed shebang
added more description parsing
moved back to top link above resources
some pixel pushing
Merge pull request #625 from paczian/develop

api typo fixed
added secondary email address to user
added verbosity to return registration requests
Merge pull request #628 from paczian/develop

added secondary email address to user
added request_access to valid verbosities
added accept and deny acount functions
fixed typo
added html formatting to the description
updated api2html parser to work with formatted description
added proper data return to request_access query