Revert "Revert "run sphinx-apidoc to generate new .rst files (if we rename a Python file or add/delete Python files, this is necessary)""

This reverts commit bb3fa41c96d9d4bdee54a0af842aebd6a0ef5202.
Revert "go through LOTlib files with SublimePythonIDE, make sure they conform to PEP8 standards, in the hopes that docstrings will start showing up"

This reverts commit 3776db12f164016c665d6279392575a73174d589.