Updated to match internal version 14.1.1 (b252c8237acb25c80f2d34b5737a752670223549)
- Updated default in sisyphus.yml to 2014
- Fixed up checksum handling and generation to make archiving more robust to files
  changed from regeneration of project or summary files by extractProject.pl or
  generateReport.pl
- New magic to include perl libraries without relying on user environment variables
- Added loading of required Uppmax modules to scripts generated by aeacus-reports
- Modified for running on the new Uppmax cluster Milou
- Default paths changed to match changes at Uppmax
- Fixed bug where fastqStats and extractProject failed to identify the tag for samples with dual indexing as it includes a hyphen.
- Excluded .md5-files from compression when archiving.
- Added some more error correction on SampleSheets.