Merge branch 'develop'. Latest stable version is 1.0.4.4.
Merging new version 1.1 of BESST that was developed in develop branch. With LP module and additional parameters and fixes (see document VERSIONS.txt for log file of changes)
Merge branch 'develop'
Various bug fixes of v1.1 introduced with new parameters.
Merge branch 'develop'
Two hotfixes: runtime error when -m and -s specified for a PE lib (with no MP contamination obviously).
Empty repeat file in rare cases when --separate_repeats specified and no scaffolding is performed with an existing second library.
 Bumped up version number to 1.1.2.
Fixed two bugs. Runtime error for PE lib without contiamination if -m ans -s specified and empty repeats.fa bug
Merge branch 'hotfix/1.1.1' into develop