Switch from commons-logging to jcl-over-slf4j

Dropwizard 0.7.1 will include jcl-over-slf4j in dropwizard logging, which
clashes with jade4j and jets3t. Exclude the c-l dependency, pull in
jcl-over-slf4j at runtime.
Update deploy API request syntax
Merge pull request #323 from evertrue/evertrue/eherot/docs_-_fix_deploy_api_syntax

Update deploy API request syntax
Merge pull request #309 from HubSpot/swagger

Embedded API docs via swagger
Merge pull request #322 from hgschmie/commons-logging-fix

Switch from commons-logging to jcl-over-slf4j
Additionally generate API docs in /docs/reference/api.md
fix eclipse swagger issue
Additionally generate API docs in /docs/reference/api.md
Merge branch 'master' into swagger
dont use HTML tables in markdown template