[ADAM-331] Moving code coverage analysis into a profile, so it is not packaged into artifacts.
Merge pull request #334 from fnothaft/fix-ccov

Moving code coverage into a profile
[ADAM-330] Make mismatch and deletes positions accessible
Merge pull request #330 from hammerlab/mdtag-access

Make mismatch and deletes positions accessible
[ADAM-332] Upgrades ADAM to Spark 1.0.1.