Initial commit
new file
remove file
bed handling added
added pipeline from qsub_batch_exome_fastq_PE_BWAmem.pl
moved alignment_pipeline.pl
added again qsub_batch_exome_fastq_PE_BWAmem.pl as Predict/alignment_pipeline.pl
added Annotation scripts
relocated ranking and inheritance scripts
created folder for DB and Web part of ediva
added whichQuality_bam.py, alignment_pipeline.config
added Predict/bam_rescale_quals.py
added create_pileup.pl for vcf depended coverage investigation
pipeline supports now split Clindel, GATK or both calls. Tsting needed
usage added
algorithm changed to be more robust
expected input added
current working version
all inheritance modes added
final addition...