updata annotate.index.snp.pl. add running time to command line
update calculate.cube.id.pl. add running time to command line.
update calculate.maf.dist.ldnum.pl. add running time to command line.
update calculatePvalue.pl. add running time to command line.
update create.statistic.summary.file.pl. add running time to command line.
update FallInBeds.pl. add function to calculate top N bed file for in-bed SNPs and LDs. add progress bar. add running time to command line.
update find.neighbors.LDbuddy.pl. add running time to command line.
update find.neighbors.pl. add running time to command line.
update overlap.pl. add running time to command line.
update put.snp.in.cubes.pl. add running time to command line.
update sort.bed.file.pl. add running time to command line.
add check.index.snp.and.lds.in.bed.pl. this script to calculate in-bed SNPs and LDs
add merge.index.SNP.and.LD.in.bed.pl. this script to merge in-bed SNPs and LDs tables.
update FallInBed.pm. add function to calculate top N bed files for in-bed SNPs and LDs
update example.conf. add two parameters. TOPNBEDFILES, define top n p-value of bed files. JOBNUMBER, running jobs.
update release_version.txt. change version to 1.1
update FallInBed.pm. add function to judge pvalue is a number.