you still did not ignore node_modules

You are running outdated versions of:

nib@1.0.4 node_modules/nib
└── stylus@0.45.1 (css-parse@1.7.0, mkdirp@0.3.5, debug@2.1.0, sax@0.5.8, glob@3.2.11)

express@4.9.8 node_modules/express
├── merge-descriptors@0.0.2
├── fresh@0.2.4
├── cookie@0.1.2
├── escape-html@1.0.1
├── range-parser@1.0.2
├── cookie-signature@1.0.5
├── utils-merge@1.0.0
├── finalhandler@0.2.0
├── vary@1.0.0
├── media-typer@0.3.0
├── methods@1.1.0
├── parseurl@1.3.0
├── serve-static@1.6.4
├── path-to-regexp@0.1.3
├── depd@0.4.5
├── qs@2.2.4
├── debug@2.0.0 (ms@0.6.2)
├── on-finished@2.1.0 (ee-first@1.0.5)
├── send@0.9.3 (ms@0.6.2, destroy@1.0.3, mime@1.2.11)
├── etag@1.4.0 (crc@3.0.0)
├── proxy-addr@1.0.3 (forwarded@0.1.0, ipaddr.js@0.1.3)
├── type-is@1.5.2 (mime-types@2.0.2)
└── accepts@1.1.2 (negotiator@0.4.9, mime-types@2.0.2)

stylus@0.49.2 node_modules/stylus
├── css-parse@1.7.0
├── mkdirp@0.3.5
├── debug@2.1.0 (ms@0.6.2)
├── source-map@0.1.40 (amdefine@0.1.0)
├── glob@3.2.11 (inherits@2.0.1, minimatch@0.3.0)
└── sax@0.5.8

jade@0.31.0 node_modules/jade
├── character-parser@1.0.2
├── mkdirp@0.3.5
├── commander@1.1.1 (keypress@0.1.0)
├── monocle@0.1.46 (readdirp@0.2.5)
├── with@1.0.3 (lexical-scope@0.0.11)
└── transformers@2.0.1 (promise@2.0.0, css@1.0.8, uglify-js@2.2.5)