update pipeline, add option to set the millions of read for the complexity plot

Oh, I forgot to change it. Fixed.

On Thu, Oct 16, 2014 at 10:02 PM, Phil Ewels <notifications@github.com>
wrote:

> In scripts/RNA_analysis/RNA_analysis.sh:
>
> > @@ -23,7 +24,8 @@ for dir in "$@"; do
> >      run_dirs=$run_dirs" "$dir
> >  done
> >
> > -WP=/pica/h1/funk_001/opt/scilifelab/scripts/RNA_analysis
> > +#WP=/pica/h1/funk_001/opt/scilifelab/scripts/RNA_analysis
> > +WP=~junw/opt/scilifelab/scripts/RNA_analysis
>
> Oops, did you mean to leave this in for the PR?
>
> —
> Reply to this email directly or view it on GitHub
> <https://github.com/SciLifeLab/scilifelab/pull/444/files#r18982245>.
>