Activate ModifierOrder check
Finish migration to JDK7

Multicatch, for-loop, switch over strings, try catch, etc.
NetBeans check for probable bugs
NetBeans performance inspection pass
Enforce constant names, final names, and local variable names in
accordance with Java best practices
Merge branch 'develop' into feature/tighten_checkstyle

Conflicts:
	seqware-pipeline/src/main/java/net/sourceforge/seqware/pipeline/workflowV2/engine/oozie/OozieWorkflowXmlGenerator.java
Fix merge
Merge pull request #255 from SeqWare/feature/tighten_checkstyle

Feature/tighten checkstyle