tables made, now comes the boring coding bit
added variant quality and renamed the variants table to variant
old DB module + started API + test coding
3 tables with API + tests done, this is getting painful
added everything for coverage
Variant stuff done, and so am I
sample_variants added. Should do some more error checking tests, but cannot be bothered right now
sample_variants added. Should do some more error checking tests, but cannot be bothered right now
coverage added, everything is done, but for a small bug in DB.pm
coverage added, everything is done, but for a small bug in DB.pm
Can now take multiple condition keys on an update
all done. API + tests are in the box. Let the real coding begin!
fixed minour bugs that was not caught by the tests
added sequence stats + reference to regions
scripts to get data into the database
scripts to handle exome sized data. Most importantly is the new script that can add/remove regions
Merge branch 'master' of github.com:brugger/ExomeVCFdb